RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.18■■■□□ 2.74
VPS13B-204ENST00000441350 ARAP3Q8WWN8 1544 aa32.16■■■□□ 2.74
VPS13B-204ENST00000441350 ARHGAP5Q13017 1502 aa32.12■■■□□ 2.73
VPS13B-204ENST00000441350 FAM50AQ14320 339 aaKnown RBP32.11■■■□□ 2.73
VPS13B-204ENST00000441350 MAP3K4Q9Y6R4 1608 aa32.11■■■□□ 2.73
VPS13B-204ENST00000441350 CD109Q6YHK3 1445 aa32.11■■■□□ 2.73
VPS13B-204ENST00000441350 PCGF6Q9BYE7 350 aa32.1■■■□□ 2.73
VPS13B-204ENST00000441350 ZNF644Q9H582 1327 aaPredicted RBP32.1■■■□□ 2.73
VPS13B-204ENST00000441350 FAM69CQ0P6D2 419 aa32.09■■■□□ 2.73
VPS13B-204ENST00000441350 CAMSAP2Q08AD1 1489 aa32.08■■■□□ 2.73
VPS13B-204ENST00000441350 KIF13AQ9H1H9 1805 aa32.06■■■□□ 2.72
VPS13B-204ENST00000441350 ZNF777Q9ULD5 760 aaPredicted RBP32.06■■■□□ 2.72
VPS13B-204ENST00000441350 SAMD9LQ8IVG5 1584 aa32.06■■■□□ 2.72
VPS13B-204ENST00000441350 EFCAB2Q5VUJ9 269 aa32.05■■■□□ 2.72
VPS13B-204ENST00000441350 FANCAO15360 1455 aa32.01■■■□□ 2.72
VPS13B-204ENST00000441350 PLEKHH2Q8IVE3 1493 aa31.96■■■□□ 2.71
VPS13B-204ENST00000441350 KIAA1107Q9UPP5 1409 aa31.96■■■□□ 2.71
VPS13B-204ENST00000441350 DNMT1P26358 1616 aaKnown RBP31.94■■■□□ 2.7
VPS13B-204ENST00000441350 CFAP74Q9C0B2 1584 aa31.94■■■□□ 2.7
VPS13B-204ENST00000441350 MBD5Q9P267 1494 aa31.94■■■□□ 2.7
VPS13B-204ENST00000441350 ABCC1P33527 1531 aa31.93■■■□□ 2.7
VPS13B-204ENST00000441350 ITGAEP38570 1179 aa31.92■■■□□ 2.7
VPS13B-204ENST00000441350 ARHGEF5Q12774 1597 aa31.92■■■□□ 2.7
VPS13B-204ENST00000441350 PPRC1Q5VV67 1664 aaKnown RBP31.91■■■□□ 2.7
VPS13B-204ENST00000441350 SYCP2Q9BX26 1530 aa31.91■■■□□ 2.7
VPS13B-204ENST00000441350 ABCC5O15440 1437 aa31.91■■■□□ 2.7
VPS13B-204ENST00000441350 DAPK1P53355 1430 aa31.91■■■□□ 2.7
VPS13B-204ENST00000441350 NEO1Q92859 1461 aa31.9■■■□□ 2.7
VPS13B-204ENST00000441350 PTPRKQ15262 1439 aa31.9■■■□□ 2.7
VPS13B-204ENST00000441350 AKNAQ7Z591 1439 aa31.9■■■□□ 2.7
VPS13B-204ENST00000441350 HNRNPMP52272 730 aaKnown RBP eCLIP31.89■■■□□ 2.73e-7■■■■■ 30.9
VPS13B-204ENST00000441350 ARHGEF12Q9NZN5 1544 aa31.89■■■□□ 2.7
VPS13B-204ENST00000441350 TSPOAP1O95153 1857 aa31.88■■■□□ 2.69
VPS13B-204ENST00000441350 RSPH4AQ5TD94 716 aa31.86■■■□□ 2.69
VPS13B-204ENST00000441350 ADGRL1O94910 1474 aa31.85■■■□□ 2.69
VPS13B-204ENST00000441350 TEX14Q8IWB6 1497 aa31.84■■■□□ 2.69
VPS13B-204ENST00000441350 CROCC2H7BZ55 1655 aa31.83■■■□□ 2.69
VPS13B-204ENST00000441350 CCDC141Q6ZP82 1450 aa31.83■■■□□ 2.69
VPS13B-204ENST00000441350 SCAPERQ9BY12 1400 aa31.82■■■□□ 2.68
VPS13B-204ENST00000441350 SHANK2Q9UPX8 1470 aa31.79■■■□□ 2.68
VPS13B-204ENST00000441350 TRAPPC8Q9Y2L5 1435 aa31.79■■■□□ 2.68
VPS13B-204ENST00000441350 TRHP20396 242 aaPredicted RBP31.78■■■□□ 2.68
VPS13B-204ENST00000441350 CHIC2Q9UKJ5 165 aa31.74■■■□□ 2.67
VPS13B-204ENST00000441350 C9orf84Q5VXU9 1444 aa31.73■■■□□ 2.67
VPS13B-204ENST00000441350 TSPY4P0CV99 314 aa31.73■■■□□ 2.67
VPS13B-204ENST00000441350 TSPY10P0CW01 314 aa31.73■■■□□ 2.67
VPS13B-204ENST00000441350 ROCK1Q13464 1354 aa31.72■■■□□ 2.67
VPS13B-204ENST00000441350 MAST1Q9Y2H9 1570 aa31.72■■■□□ 2.67
VPS13B-204ENST00000441350 ADGRL2O95490 1459 aa31.71■■■□□ 2.67
VPS13B-204ENST00000441350 AFAP1Q8N556 730 aa31.71■■■□□ 2.67
VPS13B-204ENST00000441350 ADGBQ8N7X0 1667 aa31.7■■■□□ 2.67
VPS13B-204ENST00000441350 POGZQ7Z3K3 1410 aa31.7■■■□□ 2.66
VPS13B-204ENST00000441350 DENND4BO75064 1496 aaPredicted RBP31.69■■■□□ 2.66
VPS13B-204ENST00000441350 ZNF518AQ6AHZ1 1483 aa31.69■■■□□ 2.66
VPS13B-204ENST00000441350 HFM1A2PYH4 1435 aa31.67■■■□□ 2.66
VPS13B-204ENST00000441350 NCOA1Q15788 1441 aa31.67■■■□□ 2.66
VPS13B-204ENST00000441350 KDM5CP41229 1560 aa31.64■■■□□ 2.66
VPS13B-204ENST00000441350 RICTORQ6R327 1708 aa31.64■■■□□ 2.65
VPS13B-204ENST00000441350 ANKRD30AQ9BXX3 1397 aa31.63■■■□□ 2.65
VPS13B-204ENST00000441350 NAIPQ13075 1403 aa31.63■■■□□ 2.65
VPS13B-204ENST00000441350 RRP7BPQ9NSQ0 103 aa31.63■■■□□ 2.65
VPS13B-204ENST00000441350 RTEL1-TNFRSF6BF6WH68 1400 aa31.63■■■□□ 2.65
VPS13B-204ENST00000441350 SPAG9O60271 1321 aaKnown RBP31.62■■■□□ 2.65
VPS13B-204ENST00000441350 SETD5Q9C0A6 1442 aa31.61■■■□□ 2.65
VPS13B-204ENST00000441350 GCC2Q8IWJ2 1684 aa31.6■■■□□ 2.65
VPS13B-204ENST00000441350 INO80Q9ULG1 1556 aaPredicted RBP31.6■■■□□ 2.65
VPS13B-204ENST00000441350 ZFYVE16Q7Z3T8 1539 aa31.6■■■□□ 2.65
VPS13B-204ENST00000441350 RAPGEF3O95398 923 aa31.6■■■□□ 2.65
VPS13B-204ENST00000441350 PLXNC1O60486 1568 aa31.59■■■□□ 2.65
VPS13B-204ENST00000441350 FRMPD1Q5SYB0 1578 aa31.59■■■□□ 2.65
VPS13B-204ENST00000441350 ATP7AQ04656 1500 aa31.57■■■□□ 2.64
VPS13B-204ENST00000441350 COL17A1Q9UMD9 1497 aaPredicted RBP31.56■■■□□ 2.64
VPS13B-204ENST00000441350 MLH3Q9UHC1 1453 aa31.56■■■□□ 2.64
VPS13B-204ENST00000441350 KIDINS220Q9ULH0 1771 aa31.54■■■□□ 2.64
VPS13B-204ENST00000441350 RAB3GAP2Q9H2M9 1393 aa31.53■■■□□ 2.64
VPS13B-204ENST00000441350 KIF15Q9NS87 1388 aa31.53■■■□□ 2.64
VPS13B-204ENST00000441350 HECW2Q9P2P5 1572 aa31.53■■■□□ 2.64
VPS13B-204ENST00000441350 ZMYM4Q5VZL5 1548 aa31.51■■■□□ 2.64
VPS13B-204ENST00000441350 HRCP23327 699 aa31.49■■■□□ 2.63
VPS13B-204ENST00000441350 KDM6BO15054 1643 aa31.46■■■□□ 2.63
VPS13B-204ENST00000441350 ANKRD50Q9ULJ7 1429 aa31.45■■■□□ 2.63
VPS13B-204ENST00000441350 DUOX2Q9NRD8 1548 aa31.45■■■□□ 2.62
VPS13B-204ENST00000441350 MYT1LQ9UL68 1186 aa31.43■■■□□ 2.62
VPS13B-204ENST00000441350 MAGI2Q86UL8 1455 aa31.43■■■□□ 2.62
VPS13B-204ENST00000441350 ABCA6Q8N139 1617 aa31.4■■■□□ 2.62
VPS13B-204ENST00000441350 ERBINQ96RT1 1412 aa31.37■■■□□ 2.61
VPS13B-204ENST00000441350 DIP2CQ9Y2E4 1556 aa31.37■■■□□ 2.61
VPS13B-204ENST00000441350 YEATS2Q9ULM3 1422 aa31.37■■■□□ 2.61
VPS13B-204ENST00000441350 DHX29Q7Z478 1369 aaKnown RBP31.35■■■□□ 2.61
VPS13B-204ENST00000441350 A2MP01023 1474 aa31.33■■■□□ 2.61
VPS13B-204ENST00000441350 ACIN1Q9UKV3 1341 aaKnown RBP31.33■■■□□ 2.61
VPS13B-204ENST00000441350 EIF2AK4Q9P2K8 1649 aaKnown RBP31.27■■■□□ 2.6
VPS13B-204ENST00000441350 ARHGEF40Q8TER5 1519 aa31.27■■■□□ 2.6
VPS13B-204ENST00000441350 ATP10AO60312 1499 aa31.27■■■□□ 2.6
VPS13B-204ENST00000441350 REREQ9P2R6 1566 aa31.24■■■□□ 2.59
VPS13B-204ENST00000441350 UNC13BO14795 1591 aa31.22■■■□□ 2.59
VPS13B-204ENST00000441350 DHX57Q6P158 1386 aaKnown RBP31.22■■■□□ 2.59
VPS13B-204ENST00000441350 BCORL1Q5H9F3 1711 aa31.21■■■□□ 2.59
VPS13B-204ENST00000441350 TRIM52Q96A61 297 aa31.21■■■□□ 2.59
VPS13B-204ENST00000441350 DEPDC5O75140 1603 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms