RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
CPSF7-205ENST00000439958 DAPK1P53355 1430 aa21.79■■□□□ 1.08
CPSF7-205ENST00000439958 CAMSAP2Q08AD1 1489 aa21.78■■□□□ 1.08
CPSF7-205ENST00000439958 DIEXFQ68CQ4 756 aaKnown RBP21.78■■□□□ 1.08
CPSF7-205ENST00000439958 ABCC5O15440 1437 aa21.77■■□□□ 1.08
CPSF7-205ENST00000439958 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
CPSF7-205ENST00000439958 SHROOM2Q13796 1616 aa21.76■■□□□ 1.07
CPSF7-205ENST00000439958 ABCC2Q92887 1545 aa21.75■■□□□ 1.07
CPSF7-205ENST00000439958 TCOF1Q13428 1488 aaKnown RBP21.74■■□□□ 1.07
CPSF7-205ENST00000439958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.072e-8■□□□□ 11
CPSF7-205ENST00000439958 MPHOSPH9Q99550 1183 aa21.71■■□□□ 1.07
CPSF7-205ENST00000439958 ARHGAP5Q13017 1502 aa21.7■■□□□ 1.06
CPSF7-205ENST00000439958 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
CPSF7-205ENST00000439958 HIRIP3Q9BW71 556 aaPredicted RBP21.69■■□□□ 1.06
CPSF7-205ENST00000439958 MAPKBP1O60336 1514 aa21.67■■□□□ 1.06
CPSF7-205ENST00000439958 ANKRD30AQ9BXX3 1397 aa21.67■■□□□ 1.06
CPSF7-205ENST00000439958 EFCAB2Q5VUJ9 269 aa21.67■■□□□ 1.06
CPSF7-205ENST00000439958 ABCC10Q5T3U5 1492 aa21.65■■□□□ 1.06
CPSF7-205ENST00000439958 ITSN2Q9NZM3 1697 aa21.64■■□□□ 1.05
CPSF7-205ENST00000439958 C9orf84Q5VXU9 1444 aa21.62■■□□□ 1.05
CPSF7-205ENST00000439958 KDM6BO15054 1643 aa21.61■■□□□ 1.05
CPSF7-205ENST00000439958 ZNF326Q5BKZ1 582 aaKnown RBP21.61■■□□□ 1.05
CPSF7-205ENST00000439958 AFAP1Q8N556 730 aa21.61■■□□□ 1.05
CPSF7-205ENST00000439958 AKNAQ7Z591 1439 aa21.6■■□□□ 1.05
CPSF7-205ENST00000439958 NCOA1Q15788 1441 aa21.59■■□□□ 1.05
CPSF7-205ENST00000439958 ZCCHC11Q5TAX3 1644 aaKnown RBP21.59■■□□□ 1.05
CPSF7-205ENST00000439958 KIF15Q9NS87 1388 aa21.59■■□□□ 1.05
CPSF7-205ENST00000439958 TTC37Q6PGP7 1564 aa21.58■■□□□ 1.05
CPSF7-205ENST00000439958 DNMT1P26358 1616 aaKnown RBP21.58■■□□□ 1.05
CPSF7-205ENST00000439958 CDC42BPAQ5VT25 1732 aa21.58■■□□□ 1.04
CPSF7-205ENST00000439958 PKD2Q13563 968 aa21.58■■□□□ 1.04
CPSF7-205ENST00000439958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.57■■□□□ 1.04
CPSF7-205ENST00000439958 NUP155O75694 1391 aa21.57■■□□□ 1.04
CPSF7-205ENST00000439958 ANKRD50Q9ULJ7 1429 aa21.57■■□□□ 1.04
CPSF7-205ENST00000439958 ROCK1Q13464 1354 aa21.56■■□□□ 1.04
CPSF7-205ENST00000439958 ADCY10Q96PN6 1610 aa21.56■■□□□ 1.04
CPSF7-205ENST00000439958 KDM5BQ9UGL1 1544 aa21.56■■□□□ 1.04
CPSF7-205ENST00000439958 ASXL2Q76L83 1435 aa21.54■■□□□ 1.04
CPSF7-205ENST00000439958 SYCP2Q9BX26 1530 aa21.54■■□□□ 1.04
CPSF7-205ENST00000439958 UHRF1BP1LA0JNW5 1464 aa21.51■■□□□ 1.03
CPSF7-205ENST00000439958 WDR7Q9Y4E6 1490 aa21.51■■□□□ 1.03
CPSF7-205ENST00000439958 SPAG9O60271 1321 aaKnown RBP21.5■■□□□ 1.03
CPSF7-205ENST00000439958 RSPH4AQ5TD94 716 aa21.5■■□□□ 1.03
CPSF7-205ENST00000439958 CCDC141Q6ZP82 1450 aa21.5■■□□□ 1.03
CPSF7-205ENST00000439958 PPP1R15AO75807 674 aaPredicted RBP21.49■■□□□ 1.03
CPSF7-205ENST00000439958 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
CPSF7-205ENST00000439958 PLCH2O75038 1416 aa21.47■■□□□ 1.03
CPSF7-205ENST00000439958 SAMD9LQ8IVG5 1584 aa21.47■■□□□ 1.03
CPSF7-205ENST00000439958 CDC42BPBQ9Y5S2 1711 aa21.45■■□□□ 1.02
CPSF7-205ENST00000439958 L3MBTL2Q969R5 705 aa21.45■■□□□ 1.02
CPSF7-205ENST00000439958 MBD5Q9P267 1494 aa21.45■■□□□ 1.02
CPSF7-205ENST00000439958 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
CPSF7-205ENST00000439958 KDM2AQ9Y2K7 1162 aa21.43■■□□□ 1.02
CPSF7-205ENST00000439958 PREX2Q70Z35 1606 aa21.43■■□□□ 1.02
CPSF7-205ENST00000439958 TRAPPC8Q9Y2L5 1435 aa21.43■■□□□ 1.02
CPSF7-205ENST00000439958 FANCAO15360 1455 aa21.41■■□□□ 1.02
CPSF7-205ENST00000439958 MYO5CQ9NQX4 1742 aa21.41■■□□□ 1.02
CPSF7-205ENST00000439958 RGL3Q3MIN7 710 aa21.41■■□□□ 1.02
CPSF7-205ENST00000439958 MIER1Q8N108 512 aa21.4■■□□□ 1.02
CPSF7-205ENST00000439958 SCAPERQ9BY12 1400 aa21.39■■□□□ 1.02
CPSF7-205ENST00000439958 TIMELESSQ9UNS1 1208 aa21.38■■□□□ 1.01
CPSF7-205ENST00000439958 ARHGEF12Q9NZN5 1544 aa21.38■■□□□ 1.01
CPSF7-205ENST00000439958 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
CPSF7-205ENST00000439958 FAM69CQ0P6D2 419 aa21.38■■□□□ 1.01
CPSF7-205ENST00000439958 KIF3BO15066 747 aa21.37■■□□□ 1.01
CPSF7-205ENST00000439958 CD109Q6YHK3 1445 aa21.37■■□□□ 1.01
CPSF7-205ENST00000439958 PLEKHH2Q8IVE3 1493 aa21.36■■□□□ 1.01
CPSF7-205ENST00000439958 RAPGEF3O95398 923 aa21.36■■□□□ 1.01
CPSF7-205ENST00000439958 POLR3GLQ9BT43 218 aa21.36■■□□□ 1.01
CPSF7-205ENST00000439958 ADGRL2O95490 1459 aa21.35■■□□□ 1.01
CPSF7-205ENST00000439958 DENND4BO75064 1496 aaPredicted RBP21.35■■□□□ 1.01
CPSF7-205ENST00000439958 ADGRL1O94910 1474 aa21.35■■□□□ 1.01
CPSF7-205ENST00000439958 ANKRD30BQ9BXX2 1392 aa21.33■■□□□ 1
CPSF7-205ENST00000439958 SHANK2Q9UPX8 1470 aa21.33■■□□□ 1
CPSF7-205ENST00000439958 ADGBQ8N7X0 1667 aa21.32■■□□□ 1
CPSF7-205ENST00000439958 KIAA1107Q9UPP5 1409 aa21.32■■□□□ 1
CPSF7-205ENST00000439958 ACIN1Q9UKV3 1341 aaKnown RBP21.31■■□□□ 1
CPSF7-205ENST00000439958 PZPP20742 1482 aa21.31■■□□□ 1
CPSF7-205ENST00000439958 GGT6Q6P531 493 aa21.3■■□□□ 1
CPSF7-205ENST00000439958 CROCC2H7BZ55 1655 aa21.3■■□□□ 1
CPSF7-205ENST00000439958 CNGB1Q14028 1251 aaPredicted RBP21.29■■□□□ 1
CPSF7-205ENST00000439958 ARHGEF5Q12774 1597 aa21.29■■□□□ 1
CPSF7-205ENST00000439958 DCAF11Q8TEB1 546 aa21.28■■□□□ 1
CPSF7-205ENST00000439958 NBPF8Q3BBV2 869 aa21.24■□□□□ 0.99
CPSF7-205ENST00000439958 ABCC1P33527 1531 aa21.24■□□□□ 0.99
CPSF7-205ENST00000439958 HSPA5P11021 654 aaKnown RBP21.22■□□□□ 0.99
CPSF7-205ENST00000439958 EIF4G2P78344 907 aaKnown RBP eCLIP21.21■□□□□ 0.99
CPSF7-205ENST00000439958 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
CPSF7-205ENST00000439958 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
CPSF7-205ENST00000439958 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
CPSF7-205ENST00000439958 CHGAP10645 457 aaKnown RBP21.2■□□□□ 0.98
CPSF7-205ENST00000439958 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
CPSF7-205ENST00000439958 RPRD2Q5VT52 1461 aaKnown RBP21.19■□□□□ 0.98
CPSF7-205ENST00000439958 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
CPSF7-205ENST00000439958 ABCA9Q8IUA7 1624 aa21.16■□□□□ 0.98
CPSF7-205ENST00000439958 FAM135AQ9P2D6 1515 aa21.16■□□□□ 0.98
CPSF7-205ENST00000439958 KANK1Q14678 1352 aa21.15■□□□□ 0.98
CPSF7-205ENST00000439958 DUOX2Q9NRD8 1548 aa21.14■□□□□ 0.98
CPSF7-205ENST00000439958 MLECQ14165 292 aa21.12■□□□□ 0.97
CPSF7-205ENST00000439958 CARD11Q9BXL7 1154 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms