RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 SCAPERQ9BY12 1400 aa26.45■■□□□ 1.82
SNRPD3-204ENST00000439775 EFCAB2Q5VUJ9 269 aa26.44■■□□□ 1.82
SNRPD3-204ENST00000439775 ZFYVE16Q7Z3T8 1539 aa26.44■■□□□ 1.82
SNRPD3-204ENST00000439775 BCORL1Q5H9F3 1711 aa26.42■■□□□ 1.82
SNRPD3-204ENST00000439775 ARHGAP5Q13017 1502 aa26.41■■□□□ 1.82
SNRPD3-204ENST00000439775 HECW2Q9P2P5 1572 aa26.4■■□□□ 1.82
SNRPD3-204ENST00000439775 YEATS2Q9ULM3 1422 aa26.39■■□□□ 1.82
SNRPD3-204ENST00000439775 PTPRMP28827 1452 aa26.37■■□□□ 1.81
SNRPD3-204ENST00000439775 ARID4BQ4LE39 1312 aaPredicted RBP26.37■■□□□ 1.81
SNRPD3-204ENST00000439775 ZNF518AQ6AHZ1 1483 aa26.36■■□□□ 1.81
SNRPD3-204ENST00000439775 PREX2Q70Z35 1606 aa26.36■■□□□ 1.81
SNRPD3-204ENST00000439775 MADDQ8WXG6 1647 aa26.34■■□□□ 1.81
SNRPD3-204ENST00000439775 CDC42BPBQ9Y5S2 1711 aa26.34■■□□□ 1.81
SNRPD3-204ENST00000439775 KDM5CP41229 1560 aa26.33■■□□□ 1.8
SNRPD3-204ENST00000439775 SIGLEC1Q9BZZ2 1709 aa26.31■■□□□ 1.8
SNRPD3-204ENST00000439775 CEP162Q5TB80 1403 aa26.28■■□□□ 1.8
SNRPD3-204ENST00000439775 ABCC1P33527 1531 aa26.28■■□□□ 1.8
SNRPD3-204ENST00000439775 C9orf84Q5VXU9 1444 aa26.27■■□□□ 1.8
SNRPD3-204ENST00000439775 ATP10AO60312 1499 aa26.27■■□□□ 1.8
SNRPD3-204ENST00000439775 CDC42BPAQ5VT25 1732 aa26.25■■□□□ 1.79
SNRPD3-204ENST00000439775 RIMS1Q86UR5 1692 aaKnown RBP26.22■■□□□ 1.79
SNRPD3-204ENST00000439775 AFAP1Q8N556 730 aa26.22■■□□□ 1.79
SNRPD3-204ENST00000439775 ARHGEF12Q9NZN5 1544 aa26.21■■□□□ 1.79
SNRPD3-204ENST00000439775 MLH3Q9UHC1 1453 aa26.21■■□□□ 1.79
SNRPD3-204ENST00000439775 ITSN2Q9NZM3 1697 aa26.21■■□□□ 1.79
SNRPD3-204ENST00000439775 REREQ9P2R6 1566 aa26.19■■□□□ 1.78
SNRPD3-204ENST00000439775 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
SNRPD3-204ENST00000439775 DIP2CQ9Y2E4 1556 aa26.18■■□□□ 1.78
SNRPD3-204ENST00000439775 TRAPPC8Q9Y2L5 1435 aa26.18■■□□□ 1.78
SNRPD3-204ENST00000439775 MTUS2Q5JR59 1369 aa26.17■■□□□ 1.78
SNRPD3-204ENST00000439775 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
SNRPD3-204ENST00000439775 EHBP1L1Q8N3D4 1523 aa26.14■■□□□ 1.78
SNRPD3-204ENST00000439775 ABCA6Q8N139 1617 aa26.14■■□□□ 1.78
SNRPD3-204ENST00000439775 FER1L4A9Z1Z3 1794 aa26.14■■□□□ 1.78
SNRPD3-204ENST00000439775 CCNB3Q8WWL7 1395 aa26.11■■□□□ 1.77
SNRPD3-204ENST00000439775 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
SNRPD3-204ENST00000439775 LMTK3Q96Q04 1460 aa26.11■■□□□ 1.77
SNRPD3-204ENST00000439775 MLECQ14165 292 aa26.1■■□□□ 1.77
SNRPD3-204ENST00000439775 KIAA1107Q9UPP5 1409 aa26.09■■□□□ 1.77
SNRPD3-204ENST00000439775 MYT1LQ9UL68 1186 aa26.09■■□□□ 1.77
SNRPD3-204ENST00000439775 PLEKHH2Q8IVE3 1493 aa26.09■■□□□ 1.77
SNRPD3-204ENST00000439775 AGLP35573 1532 aa26.08■■□□□ 1.77
SNRPD3-204ENST00000439775 KIDINS220Q9ULH0 1771 aa26.07■■□□□ 1.76
SNRPD3-204ENST00000439775 CFDP1Q9UEE9 299 aaPredicted RBP26.06■■□□□ 1.76
SNRPD3-204ENST00000439775 ZNF777Q9ULD5 760 aaPredicted RBP26.06■■□□□ 1.76
SNRPD3-204ENST00000439775 TIAM1Q13009 1591 aa26.06■■□□□ 1.76
SNRPD3-204ENST00000439775 VPS8Q8N3P4 1428 aa26.01■■□□□ 1.75
SNRPD3-204ENST00000439775 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
SNRPD3-204ENST00000439775 INO80Q9ULG1 1556 aaPredicted RBP25.99■■□□□ 1.75
SNRPD3-204ENST00000439775 ATP7AQ04656 1500 aa25.98■■□□□ 1.75
SNRPD3-204ENST00000439775 SPAG9O60271 1321 aaKnown RBP25.98■■□□□ 1.75
SNRPD3-204ENST00000439775 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
SNRPD3-204ENST00000439775 PLPPR3Q6T4P5 718 aa25.96■■□□□ 1.75
SNRPD3-204ENST00000439775 SUPT6HQ7KZ85 1726 aaKnown RBP25.95■■□□□ 1.74
SNRPD3-204ENST00000439775 NCOA2Q15596 1464 aa25.94■■□□□ 1.74
SNRPD3-204ENST00000439775 MBD5Q9P267 1494 aa25.92■■□□□ 1.74
SNRPD3-204ENST00000439775 PLXNC1O60486 1568 aa25.92■■□□□ 1.74
SNRPD3-204ENST00000439775 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
SNRPD3-204ENST00000439775 ZNF644Q9H582 1327 aaPredicted RBP25.89■■□□□ 1.74
SNRPD3-204ENST00000439775 CNTLNQ9NXG0 1405 aa25.89■■□□□ 1.74
SNRPD3-204ENST00000439775 MAP3K1Q13233 1512 aa25.88■■□□□ 1.73
SNRPD3-204ENST00000439775 LRRC9Q6ZRR7 1453 aa25.88■■□□□ 1.73
SNRPD3-204ENST00000439775 CEBPAP49715 358 aaPredicted RBP25.88■■□□□ 1.73
SNRPD3-204ENST00000439775 A2MP01023 1474 aa25.87■■□□□ 1.73
SNRPD3-204ENST00000439775 HSPA2P54652 639 aa25.87■■□□□ 1.73
SNRPD3-204ENST00000439775 C3P01024 1663 aa25.86■■□□□ 1.73
SNRPD3-204ENST00000439775 ILDR1Q86SU0 546 aaPredicted RBP25.85■■□□□ 1.73
SNRPD3-204ENST00000439775 ESF1Q9H501 851 aaKnown RBP25.85■■□□□ 1.73
SNRPD3-204ENST00000439775 RTEL1-TNFRSF6BF6WH68 1400 aa25.85■■□□□ 1.73
SNRPD3-204ENST00000439775 CAMSAP2Q08AD1 1489 aa25.85■■□□□ 1.73
SNRPD3-204ENST00000439775 ADGBQ8N7X0 1667 aa25.83■■□□□ 1.73
SNRPD3-204ENST00000439775 UHRF1BP1Q6BDS2 1440 aa25.82■■□□□ 1.72
SNRPD3-204ENST00000439775 CCDC141Q6ZP82 1450 aa25.82■■□□□ 1.72
SNRPD3-204ENST00000439775 MROH2AA6NES4 1674 aa25.82■■□□□ 1.72
SNRPD3-204ENST00000439775 RSPH4AQ5TD94 716 aa25.78■■□□□ 1.72
SNRPD3-204ENST00000439775 SETD1BQ9UPS6 1966 aaKnown RBP25.78■■□□□ 1.72
SNRPD3-204ENST00000439775 ARHGEF5Q12774 1597 aa25.77■■□□□ 1.72
SNRPD3-204ENST00000439775 NPATQ14207 1427 aa25.74■■□□□ 1.71
SNRPD3-204ENST00000439775 DHX29Q7Z478 1369 aaKnown RBP25.72■■□□□ 1.71
SNRPD3-204ENST00000439775 KANK4Q5T7N3 995 aaPredicted RBP25.72■■□□□ 1.71
SNRPD3-204ENST00000439775 ZMYM3Q14202 1370 aa25.71■■□□□ 1.71
SNRPD3-204ENST00000439775 PPP6R1Q9UPN7 881 aa25.71■■□□□ 1.71
SNRPD3-204ENST00000439775 CLTCQ00610 1675 aaKnown RBP25.71■■□□□ 1.71
SNRPD3-204ENST00000439775 MYOM3Q5VTT5 1437 aa25.7■■□□□ 1.7
SNRPD3-204ENST00000439775 MIA2Q96PC5 1412 aa25.7■■□□□ 1.7
SNRPD3-204ENST00000439775 GGT6Q6P531 493 aa25.68■■□□□ 1.7
SNRPD3-204ENST00000439775 STRCQ7RTU9 1775 aa25.65■■□□□ 1.7
SNRPD3-204ENST00000439775 FAM135AQ9P2D6 1515 aa25.65■■□□□ 1.7
SNRPD3-204ENST00000439775 MAST1Q9Y2H9 1570 aa25.65■■□□□ 1.7
SNRPD3-204ENST00000439775 TSPY4P0CV99 314 aa25.63■■□□□ 1.69
SNRPD3-204ENST00000439775 TSPY10P0CW01 314 aa25.63■■□□□ 1.69
SNRPD3-204ENST00000439775 FBXO41Q8TF61 875 aa25.63■■□□□ 1.69
SNRPD3-204ENST00000439775 PTPRKQ15262 1439 aa25.63■■□□□ 1.69
SNRPD3-204ENST00000439775 DMRT2Q9Y5R5 561 aa25.62■■□□□ 1.69
SNRPD3-204ENST00000439775 APLP2Q06481 763 aa25.6■■□□□ 1.69
SNRPD3-204ENST00000439775 KDM5DQ9BY66 1539 aa25.59■■□□□ 1.69
SNRPD3-204ENST00000439775 MYO3AQ8NEV4 1616 aa25.59■■□□□ 1.69
SNRPD3-204ENST00000439775 ZNF142P52746 1687 aaPredicted RBP25.58■■□□□ 1.69
SNRPD3-204ENST00000439775 NCOA1Q15788 1441 aa25.58■■□□□ 1.69
SNRPD3-204ENST00000439775 KIF3BO15066 747 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms