RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 PREX2Q70Z35 1606 aa20.82■□□□□ 0.92
HLA-W-207ENST00000439514 SCAPERQ9BY12 1400 aa20.82■□□□□ 0.92
HLA-W-207ENST00000439514 ZMYM4Q5VZL5 1548 aa20.82■□□□□ 0.92
HLA-W-207ENST00000439514 RICTORQ6R327 1708 aa20.81■□□□□ 0.92
HLA-W-207ENST00000439514 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
HLA-W-207ENST00000439514 POGZQ7Z3K3 1410 aa20.8■□□□□ 0.92
HLA-W-207ENST00000439514 ZNF518AQ6AHZ1 1483 aa20.78■□□□□ 0.92
HLA-W-207ENST00000439514 ARHGEF40Q8TER5 1519 aa20.77■□□□□ 0.92
HLA-W-207ENST00000439514 CDC42BPBQ9Y5S2 1711 aa20.76■□□□□ 0.91
HLA-W-207ENST00000439514 CCNB3Q8WWL7 1395 aa20.76■□□□□ 0.91
HLA-W-207ENST00000439514 MAP3K1Q13233 1512 aa20.76■□□□□ 0.91
HLA-W-207ENST00000439514 CDC42BPAQ5VT25 1732 aa20.75■□□□□ 0.91
HLA-W-207ENST00000439514 KDM4FA0A1W2PPD8 638 aa20.74■□□□□ 0.91
HLA-W-207ENST00000439514 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
HLA-W-207ENST00000439514 PLEKHH2Q8IVE3 1493 aa20.74■□□□□ 0.91
HLA-W-207ENST00000439514 ZFYVE16Q7Z3T8 1539 aa20.73■□□□□ 0.91
HLA-W-207ENST00000439514 GPATCH8Q9UKJ3 1502 aaKnown RBP20.73■□□□□ 0.91
HLA-W-207ENST00000439514 ABCC1P33527 1531 aa20.72■□□□□ 0.91
HLA-W-207ENST00000439514 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.91
HLA-W-207ENST00000439514 APLP2Q06481 763 aa20.7■□□□□ 0.9
HLA-W-207ENST00000439514 CFDP1Q9UEE9 299 aaPredicted RBP20.7■□□□□ 0.9
HLA-W-207ENST00000439514 KDM5CP41229 1560 aa20.7■□□□□ 0.9
HLA-W-207ENST00000439514 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
HLA-W-207ENST00000439514 KIAA1107Q9UPP5 1409 aa20.68■□□□□ 0.9
HLA-W-207ENST00000439514 LRRC9Q6ZRR7 1453 aa20.66■□□□□ 0.9
HLA-W-207ENST00000439514 HECW2Q9P2P5 1572 aa20.65■□□□□ 0.9
HLA-W-207ENST00000439514 MLH3Q9UHC1 1453 aa20.65■□□□□ 0.9
HLA-W-207ENST00000439514 ARID4BQ4LE39 1312 aaPredicted RBP20.65■□□□□ 0.9
HLA-W-207ENST00000439514 ATP10AO60312 1499 aa20.64■□□□□ 0.89
HLA-W-207ENST00000439514 NCOA2Q15596 1464 aa20.64■□□□□ 0.89
HLA-W-207ENST00000439514 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
HLA-W-207ENST00000439514 SAMD9LQ8IVG5 1584 aa20.63■□□□□ 0.89
HLA-W-207ENST00000439514 C9orf84Q5VXU9 1444 aa20.63■□□□□ 0.89
HLA-W-207ENST00000439514 AFAP1Q8N556 730 aa20.63■□□□□ 0.89
HLA-W-207ENST00000439514 YEATS2Q9ULM3 1422 aa20.62■□□□□ 0.89
HLA-W-207ENST00000439514 MYT1LQ9UL68 1186 aa20.62■□□□□ 0.89
HLA-W-207ENST00000439514 TRAPPC8Q9Y2L5 1435 aa20.61■□□□□ 0.89
HLA-W-207ENST00000439514 SYCP2Q9BX26 1530 aa20.6■□□□□ 0.89
HLA-W-207ENST00000439514 ARHGEF12Q9NZN5 1544 aa20.6■□□□□ 0.89
HLA-W-207ENST00000439514 BCORL1Q5H9F3 1711 aa20.59■□□□□ 0.89
HLA-W-207ENST00000439514 REREQ9P2R6 1566 aa20.59■□□□□ 0.89
HLA-W-207ENST00000439514 RSPH4AQ5TD94 716 aa20.58■□□□□ 0.89
HLA-W-207ENST00000439514 ADAMTSL3P82987 1691 aa20.58■□□□□ 0.88
HLA-W-207ENST00000439514 SPAG9O60271 1321 aaKnown RBP20.55■□□□□ 0.88
HLA-W-207ENST00000439514 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
HLA-W-207ENST00000439514 HNRNPMP52272 730 aaKnown RBP eCLIP20.53■□□□□ 0.88
HLA-W-207ENST00000439514 MIA2Q96PC5 1412 aa20.53■□□□□ 0.88
HLA-W-207ENST00000439514 AGLP35573 1532 aa20.51■□□□□ 0.87
HLA-W-207ENST00000439514 KIDINS220Q9ULH0 1771 aa20.51■□□□□ 0.87
HLA-W-207ENST00000439514 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
HLA-W-207ENST00000439514 ABCA6Q8N139 1617 aa20.5■□□□□ 0.87
HLA-W-207ENST00000439514 ATP7AQ04656 1500 aa20.5■□□□□ 0.87
HLA-W-207ENST00000439514 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
HLA-W-207ENST00000439514 MYOM3Q5VTT5 1437 aa20.5■□□□□ 0.87
HLA-W-207ENST00000439514 MBD5Q9P267 1494 aa20.5■□□□□ 0.87
HLA-W-207ENST00000439514 RTEL1-TNFRSF6BF6WH68 1400 aa20.49■□□□□ 0.87
HLA-W-207ENST00000439514 PTPRMP28827 1452 aa20.49■□□□□ 0.87
HLA-W-207ENST00000439514 CCDC141Q6ZP82 1450 aa20.49■□□□□ 0.87
HLA-W-207ENST00000439514 INO80Q9ULG1 1556 aaPredicted RBP20.48■□□□□ 0.87
HLA-W-207ENST00000439514 MADDQ8WXG6 1647 aa20.48■□□□□ 0.87
HLA-W-207ENST00000439514 ZNF644Q9H582 1327 aaPredicted RBP20.47■□□□□ 0.87
HLA-W-207ENST00000439514 ARHGEF5Q12774 1597 aa20.46■□□□□ 0.87
HLA-W-207ENST00000439514 TSPY4P0CV99 314 aa20.43■□□□□ 0.86
HLA-W-207ENST00000439514 TSPY10P0CW01 314 aa20.43■□□□□ 0.86
HLA-W-207ENST00000439514 SIGLEC1Q9BZZ2 1709 aa20.43■□□□□ 0.86
HLA-W-207ENST00000439514 RIMS1Q86UR5 1692 aaKnown RBP20.42■□□□□ 0.86
HLA-W-207ENST00000439514 FER1L4A9Z1Z3 1794 aa20.42■□□□□ 0.86
HLA-W-207ENST00000439514 MLECQ14165 292 aa20.42■□□□□ 0.86
HLA-W-207ENST00000439514 A2MP01023 1474 aa20.42■□□□□ 0.86
HLA-W-207ENST00000439514 ADGBQ8N7X0 1667 aa20.42■□□□□ 0.86
HLA-W-207ENST00000439514 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
HLA-W-207ENST00000439514 CNTLNQ9NXG0 1405 aa20.39■□□□□ 0.85
HLA-W-207ENST00000439514 PLXNC1O60486 1568 aa20.38■□□□□ 0.85
HLA-W-207ENST00000439514 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
HLA-W-207ENST00000439514 MAST1Q9Y2H9 1570 aa20.35■□□□□ 0.85
HLA-W-207ENST00000439514 FGD6Q6ZV73 1430 aa20.35■□□□□ 0.85
HLA-W-207ENST00000439514 DHX29Q7Z478 1369 aaKnown RBP20.34■□□□□ 0.85
HLA-W-207ENST00000439514 PTPN23Q9H3S7 1636 aa20.34■□□□□ 0.85
HLA-W-207ENST00000439514 TCOF1Q13428 1488 aaKnown RBP20.32■□□□□ 0.84
HLA-W-207ENST00000439514 SHANK2Q9UPX8 1470 aa20.31■□□□□ 0.84
HLA-W-207ENST00000439514 FAM135AQ9P2D6 1515 aa20.3■□□□□ 0.84
HLA-W-207ENST00000439514 MROH2AA6NES4 1674 aa20.27■□□□□ 0.84
HLA-W-207ENST00000439514 DNMT1P26358 1616 aaKnown RBP20.25■□□□□ 0.83
HLA-W-207ENST00000439514 CROCC2H7BZ55 1655 aa20.24■□□□□ 0.83
HLA-W-207ENST00000439514 GGT6Q6P531 493 aa20.24■□□□□ 0.83
HLA-W-207ENST00000439514 DAPK1P53355 1430 aa20.24■□□□□ 0.83
HLA-W-207ENST00000439514 SETD1BQ9UPS6 1966 aaKnown RBP20.24■□□□□ 0.83
HLA-W-207ENST00000439514 KIF3BO15066 747 aa20.23■□□□□ 0.83
HLA-W-207ENST00000439514 ABCC5O15440 1437 aa20.23■□□□□ 0.83
HLA-W-207ENST00000439514 DUOX2Q9NRD8 1548 aa20.22■□□□□ 0.83
HLA-W-207ENST00000439514 EIF2AK4Q9P2K8 1649 aaKnown RBP20.22■□□□□ 0.83
HLA-W-207ENST00000439514 LMTK3Q96Q04 1460 aa20.22■□□□□ 0.83
HLA-W-207ENST00000439514 NPATQ14207 1427 aa20.21■□□□□ 0.83
HLA-W-207ENST00000439514 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
HLA-W-207ENST00000439514 C3P01024 1663 aa20.21■□□□□ 0.83
HLA-W-207ENST00000439514 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
HLA-W-207ENST00000439514 PREX1Q8TCU6 1659 aa20.2■□□□□ 0.82
HLA-W-207ENST00000439514 ZMYM3Q14202 1370 aa20.2■□□□□ 0.82
HLA-W-207ENST00000439514 KIF15Q9NS87 1388 aa20.19■□□□□ 0.82
HLA-W-207ENST00000439514 UHRF1BP1Q6BDS2 1440 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms