RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 ERBB3P21860 1342 aa13.03□□□□□ -0.32
CHEK2-217ENST00000439346 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
CHEK2-217ENST00000439346 MFRPQ9BY79 579 aa13.01□□□□□ -0.33
CHEK2-217ENST00000439346 STK25O00506 426 aa13□□□□□ -0.33
CHEK2-217ENST00000439346 RGL2O15211 777 aa12.99□□□□□ -0.33
CHEK2-217ENST00000439346 NLRP6P59044 892 aa12.99□□□□□ -0.33
CHEK2-217ENST00000439346 PKD2Q13563 968 aa12.99□□□□□ -0.33
CHEK2-217ENST00000439346 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
CHEK2-217ENST00000439346 RIMBP2O15034 1052 aa12.96□□□□□ -0.33
CHEK2-217ENST00000439346 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHEK2-217ENST00000439346 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
CHEK2-217ENST00000439346 ARSIQ5FYB1 569 aa12.93□□□□□ -0.34
CHEK2-217ENST00000439346 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
CHEK2-217ENST00000439346 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
CHEK2-217ENST00000439346 C2orf72A6NCS6 295 aa12.86□□□□□ -0.35
CHEK2-217ENST00000439346 PPP1R37O75864 691 aa12.83□□□□□ -0.36
CHEK2-217ENST00000439346 KIF3CO14782 793 aa12.82□□□□□ -0.36
CHEK2-217ENST00000439346 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
CHEK2-217ENST00000439346 NUDT7P0C024 238 aa12.77□□□□□ -0.37
CHEK2-217ENST00000439346 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
CHEK2-217ENST00000439346 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
CHEK2-217ENST00000439346 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
CHEK2-217ENST00000439346 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
CHEK2-217ENST00000439346 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
CHEK2-217ENST00000439346 PCDHGA4Q9Y5G9 962 aa12.7□□□□□ -0.38
CHEK2-217ENST00000439346 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
CHEK2-217ENST00000439346 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
CHEK2-217ENST00000439346 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
CHEK2-217ENST00000439346 SLC34A2O95436 690 aa12.62□□□□□ -0.39
CHEK2-217ENST00000439346 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHEK2-217ENST00000439346 CHGAP10645 457 aaKnown RBP12.61□□□□□ -0.39
CHEK2-217ENST00000439346 HS6ST3Q8IZP7 471 aa12.61□□□□□ -0.39
CHEK2-217ENST00000439346 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
CHEK2-217ENST00000439346 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
CHEK2-217ENST00000439346 DSG2Q14126 1118 aa12.54□□□□□ -0.4
CHEK2-217ENST00000439346 KDM4FA0A1W2PPD8 638 aa12.52□□□□□ -0.41
CHEK2-217ENST00000439346 FOXK1P85037 733 aa12.52□□□□□ -0.41
CHEK2-217ENST00000439346 GPHNQ9NQX3 736 aaPredicted RBP12.51□□□□□ -0.41
CHEK2-217ENST00000439346 PBX2P40425 430 aa12.5□□□□□ -0.41
CHEK2-217ENST00000439346 PTGER2P43116 358 aa12.5□□□□□ -0.41
CHEK2-217ENST00000439346 PTCD2Q8WV60 388 aaKnown RBP12.5□□□□□ -0.41
CHEK2-217ENST00000439346 PSEN2P49810 448 aa12.48□□□□□ -0.41
CHEK2-217ENST00000439346 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.41
CHEK2-217ENST00000439346 ARHGAP33O14559 1287 aa12.44□□□□□ -0.42
CHEK2-217ENST00000439346 UPF1Q92900 1129 aaKnown RBP eCLIP12.44□□□□□ -0.42
CHEK2-217ENST00000439346 ADGRD1Q6QNK2 874 aa12.43□□□□□ -0.42
CHEK2-217ENST00000439346 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
CHEK2-217ENST00000439346 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
CHEK2-217ENST00000439346 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
CHEK2-217ENST00000439346 PPP4R3BQ5MIZ7 849 aa12.36□□□□□ -0.43
CHEK2-217ENST00000439346 NCKAP5LQ9HCH0 1330 aa12.36□□□□□ -0.43
CHEK2-217ENST00000439346 TBC1D12O60347 775 aa12.35□□□□□ -0.43
CHEK2-217ENST00000439346 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
CHEK2-217ENST00000439346 KCNK17Q96T54 332 aa12.35□□□□□ -0.43
CHEK2-217ENST00000439346 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
CHEK2-217ENST00000439346 HRO43593 1189 aa12.33□□□□□ -0.44
CHEK2-217ENST00000439346 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
CHEK2-217ENST00000439346 ZNF454Q8N9F8 522 aa12.3□□□□□ -0.44
CHEK2-217ENST00000439346 TK2O00142 265 aa12.29□□□□□ -0.44
CHEK2-217ENST00000439346 KCTD12Q96CX2 325 aaKnown RBP12.29□□□□□ -0.44
CHEK2-217ENST00000439346 HCSTQ9UBK5 93 aa12.28□□□□□ -0.44
CHEK2-217ENST00000439346 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
CHEK2-217ENST00000439346 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
CHEK2-217ENST00000439346 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
CHEK2-217ENST00000439346 LARP6Q9BRS8 491 aaKnown RBP12.25□□□□□ -0.45
CHEK2-217ENST00000439346 PDE4AP27815 886 aa12.23□□□□□ -0.45
CHEK2-217ENST00000439346 VPS9D1Q9Y2B5 631 aa12.23□□□□□ -0.45
CHEK2-217ENST00000439346 FOSBP53539 338 aa12.21□□□□□ -0.45
CHEK2-217ENST00000439346 EVI5O60447 810 aa12.2□□□□□ -0.46
CHEK2-217ENST00000439346 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
CHEK2-217ENST00000439346 CADPS2Q86UW7 1296 aa12.19□□□□□ -0.46
CHEK2-217ENST00000439346 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
CHEK2-217ENST00000439346 KCNH8Q96L42 1107 aa12.19□□□□□ -0.46
CHEK2-217ENST00000439346 BCL2L12Q9HB09 334 aa12.19□□□□□ -0.46
CHEK2-217ENST00000439346 PTPN5P54829 565 aa12.17□□□□□ -0.46
CHEK2-217ENST00000439346 ADAM33Q9BZ11 813 aa12.17□□□□□ -0.46
CHEK2-217ENST00000439346 EMILIN3Q9NT22 766 aa12.17□□□□□ -0.46
CHEK2-217ENST00000439346 ANO8Q9HCE9 1232 aaPredicted RBP12.15□□□□□ -0.46
CHEK2-217ENST00000439346 PTPREP23469 700 aa12.14□□□□□ -0.47
CHEK2-217ENST00000439346 MAP3K9P80192 1104 aa12.13□□□□□ -0.47
CHEK2-217ENST00000439346 MFSD10Q14728 455 aa12.13□□□□□ -0.47
CHEK2-217ENST00000439346 JPH4Q96JJ6 628 aa12.13□□□□□ -0.47
CHEK2-217ENST00000439346 ZBED2Q9BTP6 218 aa12.12□□□□□ -0.47
CHEK2-217ENST00000439346 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
CHEK2-217ENST00000439346 BHMG1C9JSJ3 638 aaPredicted RBP12.1□□□□□ -0.47
CHEK2-217ENST00000439346 SLC4A5Q9BY07 1137 aa12.08□□□□□ -0.48
CHEK2-217ENST00000439346 PCDHGA10Q9Y5H3 936 aa12.07□□□□□ -0.48
CHEK2-217ENST00000439346 PROX2Q3B8N5 592 aa12.05□□□□□ -0.48
CHEK2-217ENST00000439346 THSD4Q6ZMP0 1018 aa12.05□□□□□ -0.48
CHEK2-217ENST00000439346 COL9A1P20849 921 aa12.04□□□□□ -0.48
CHEK2-217ENST00000439346 WNT2BQ93097 391 aa12.04□□□□□ -0.48
CHEK2-217ENST00000439346 GOLGA8CPA6NN73 597 aa12.03□□□□□ -0.48
CHEK2-217ENST00000439346 MRPL50Q8N5N7 158 aaKnown RBP12.03□□□□□ -0.48
CHEK2-217ENST00000439346 DPYSL4O14531 572 aa11.98□□□□□ -0.49
CHEK2-217ENST00000439346 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
CHEK2-217ENST00000439346 NBPF3Q9H094 633 aa11.96□□□□□ -0.49
CHEK2-217ENST00000439346 TYW1BQ6NUM6 668 aa11.95□□□□□ -0.5
CHEK2-217ENST00000439346 PHF14O94880 888 aa11.93□□□□□ -0.5
CHEK2-217ENST00000439346 RBM33Q96EV2 1170 aaKnown RBP11.93□□□□□ -0.5
CHEK2-217ENST00000439346 BCAMP50895 628 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms