RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 APLP2Q06481 763 aa26.58■■□□□ 1.85
TARDBP-203ENST00000439080 COL17A1Q9UMD9 1497 aaPredicted RBP26.56■■□□□ 1.84
TARDBP-203ENST00000439080 GPATCH8Q9UKJ3 1502 aaKnown RBP26.56■■□□□ 1.84
TARDBP-203ENST00000439080 KANK4Q5T7N3 995 aaPredicted RBP26.55■■□□□ 1.84
TARDBP-203ENST00000439080 PHLDB1Q86UU1 1377 aa26.54■■□□□ 1.84
TARDBP-203ENST00000439080 AKNAQ7Z591 1439 aa26.53■■□□□ 1.84
TARDBP-203ENST00000439080 RICTORQ6R327 1708 aa26.53■■□□□ 1.84
TARDBP-203ENST00000439080 CCNB3Q8WWL7 1395 aa26.53■■□□□ 1.84
TARDBP-203ENST00000439080 FRMPD1Q5SYB0 1578 aa26.52■■□□□ 1.84
TARDBP-203ENST00000439080 ADGRL1O94910 1474 aa26.52■■□□□ 1.84
TARDBP-203ENST00000439080 SAMD9LQ8IVG5 1584 aa26.51■■□□□ 1.83
TARDBP-203ENST00000439080 ABCC1P33527 1531 aa26.5■■□□□ 1.83
TARDBP-203ENST00000439080 EFCAB2Q5VUJ9 269 aa26.46■■□□□ 1.83
TARDBP-203ENST00000439080 DENND4BO75064 1496 aaPredicted RBP26.44■■□□□ 1.82
TARDBP-203ENST00000439080 POGZQ7Z3K3 1410 aa26.42■■□□□ 1.82
TARDBP-203ENST00000439080 SYCP2Q9BX26 1530 aa26.41■■□□□ 1.82
TARDBP-203ENST00000439080 SCAPERQ9BY12 1400 aa26.41■■□□□ 1.82
TARDBP-203ENST00000439080 ZMYM4Q5VZL5 1548 aa26.4■■□□□ 1.82
TARDBP-203ENST00000439080 CFDP1Q9UEE9 299 aaPredicted RBP26.39■■□□□ 1.82
TARDBP-203ENST00000439080 MYOM3Q5VTT5 1437 aa26.38■■□□□ 1.81
TARDBP-203ENST00000439080 ARHGEF12Q9NZN5 1544 aa26.37■■□□□ 1.81
TARDBP-203ENST00000439080 KDM5CP41229 1560 aa26.36■■□□□ 1.81
TARDBP-203ENST00000439080 PLEKHH2Q8IVE3 1493 aa26.36■■□□□ 1.81
TARDBP-203ENST00000439080 RAPGEF3O95398 923 aa26.36■■□□□ 1.81
TARDBP-203ENST00000439080 CAMSAP2Q08AD1 1489 aa26.35■■□□□ 1.81
TARDBP-203ENST00000439080 ZNF518AQ6AHZ1 1483 aa26.35■■□□□ 1.81
TARDBP-203ENST00000439080 ZNF777Q9ULD5 760 aaPredicted RBP26.35■■□□□ 1.81
TARDBP-203ENST00000439080 ARHGEF40Q8TER5 1519 aa26.33■■□□□ 1.81
TARDBP-203ENST00000439080 HECW2Q9P2P5 1572 aa26.32■■□□□ 1.8
TARDBP-203ENST00000439080 KIAA1107Q9UPP5 1409 aa26.31■■□□□ 1.8
TARDBP-203ENST00000439080 PTPN23Q9H3S7 1636 aa26.3■■□□□ 1.8
TARDBP-203ENST00000439080 MIA2Q96PC5 1412 aa26.3■■□□□ 1.8
TARDBP-203ENST00000439080 TRAPPC8Q9Y2L5 1435 aa26.29■■□□□ 1.8
TARDBP-203ENST00000439080 ZFYVE16Q7Z3T8 1539 aa26.28■■□□□ 1.8
TARDBP-203ENST00000439080 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
TARDBP-203ENST00000439080 ZNF644Q9H582 1327 aaPredicted RBP26.27■■□□□ 1.8
TARDBP-203ENST00000439080 FGD6Q6ZV73 1430 aa26.26■■□□□ 1.79
TARDBP-203ENST00000439080 MAGI2Q86UL8 1455 aa26.25■■□□□ 1.79
TARDBP-203ENST00000439080 ARHGEF5Q12774 1597 aa26.25■■□□□ 1.79
TARDBP-203ENST00000439080 MBD5Q9P267 1494 aa26.24■■□□□ 1.79
TARDBP-203ENST00000439080 INO80Q9ULG1 1556 aaPredicted RBP26.24■■□□□ 1.79
TARDBP-203ENST00000439080 PPARGC1BQ86YN6 1023 aaKnown RBP26.23■■□□□ 1.79
TARDBP-203ENST00000439080 KIDINS220Q9ULH0 1771 aa26.23■■□□□ 1.79
TARDBP-203ENST00000439080 ABCA6Q8N139 1617 aa26.23■■□□□ 1.79
TARDBP-203ENST00000439080 AFAP1Q8N556 730 aa26.21■■□□□ 1.79
TARDBP-203ENST00000439080 CCDC141Q6ZP82 1450 aa26.21■■□□□ 1.79
TARDBP-203ENST00000439080 CROCC2H7BZ55 1655 aa26.21■■□□□ 1.79
TARDBP-203ENST00000439080 HNRNPMP52272 730 aaKnown RBP eCLIP26.2■■□□□ 1.797e-7■■□□□ 12.4
TARDBP-203ENST00000439080 TCOF1Q13428 1488 aaKnown RBP26.2■■□□□ 1.79
TARDBP-203ENST00000439080 YEATS2Q9ULM3 1422 aa26.2■■□□□ 1.78
TARDBP-203ENST00000439080 DIP2CQ9Y2E4 1556 aa26.2■■□□□ 1.78
TARDBP-203ENST00000439080 MLH3Q9UHC1 1453 aa26.19■■□□□ 1.78
TARDBP-203ENST00000439080 ATP7AQ04656 1500 aa26.18■■□□□ 1.78
TARDBP-203ENST00000439080 SIGLEC1Q9BZZ2 1709 aa26.16■■□□□ 1.78
TARDBP-203ENST00000439080 DNMT1P26358 1616 aaKnown RBP26.16■■□□□ 1.78
TARDBP-203ENST00000439080 ADGBQ8N7X0 1667 aa26.12■■□□□ 1.77
TARDBP-203ENST00000439080 MAST1Q9Y2H9 1570 aa26.12■■□□□ 1.77
TARDBP-203ENST00000439080 SPAG9O60271 1321 aaKnown RBP26.11■■□□□ 1.77
TARDBP-203ENST00000439080 REREQ9P2R6 1566 aa26.1■■□□□ 1.77
TARDBP-203ENST00000439080 MYT1LQ9UL68 1186 aa26.09■■□□□ 1.77
TARDBP-203ENST00000439080 C9orf84Q5VXU9 1444 aa26.09■■□□□ 1.77
TARDBP-203ENST00000439080 ATP10AO60312 1499 aa26.08■■□□□ 1.77
TARDBP-203ENST00000439080 SHANK2Q9UPX8 1470 aa26.07■■□□□ 1.76
TARDBP-203ENST00000439080 RSPH4AQ5TD94 716 aa26.06■■□□□ 1.76
TARDBP-203ENST00000439080 RTEL1-TNFRSF6BF6WH68 1400 aa26.05■■□□□ 1.76
TARDBP-203ENST00000439080 DAPK1P53355 1430 aa26.05■■□□□ 1.76
TARDBP-203ENST00000439080 PLXNC1O60486 1568 aa26.04■■□□□ 1.76
TARDBP-203ENST00000439080 BCORL1Q5H9F3 1711 aa26.04■■□□□ 1.76
TARDBP-203ENST00000439080 ABCC5O15440 1437 aa26.03■■□□□ 1.76
TARDBP-203ENST00000439080 FAM50AQ14320 339 aaKnown RBP26.01■■□□□ 1.75
TARDBP-203ENST00000439080 RRBP1Q9P2E9 1410 aaKnown RBP26.01■■□□□ 1.75
TARDBP-203ENST00000439080 TSPY4P0CV99 314 aa25.97■■□□□ 1.75
TARDBP-203ENST00000439080 TSPY10P0CW01 314 aa25.97■■□□□ 1.75
TARDBP-203ENST00000439080 A2MP01023 1474 aa25.97■■□□□ 1.75
TARDBP-203ENST00000439080 AGLP35573 1532 aa25.96■■□□□ 1.75
TARDBP-203ENST00000439080 ADAMTSL3P82987 1691 aa25.96■■□□□ 1.75
TARDBP-203ENST00000439080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.95■■□□□ 1.741e-6■■■□□ 15.4
TARDBP-203ENST00000439080 ARID4BQ4LE39 1312 aaPredicted RBP25.94■■□□□ 1.74
TARDBP-203ENST00000439080 FER1L4A9Z1Z3 1794 aa25.93■■□□□ 1.74
TARDBP-203ENST00000439080 MADDQ8WXG6 1647 aa25.93■■□□□ 1.74
TARDBP-203ENST00000439080 ADGRL2O95490 1459 aa25.9■■□□□ 1.74
TARDBP-203ENST00000439080 EIF2AK4Q9P2K8 1649 aaKnown RBP25.89■■□□□ 1.73
TARDBP-203ENST00000439080 DUOX2Q9NRD8 1548 aa25.87■■□□□ 1.73
TARDBP-203ENST00000439080 RIMS1Q86UR5 1692 aaKnown RBP25.87■■□□□ 1.73
TARDBP-203ENST00000439080 PTPRKQ15262 1439 aa25.86■■□□□ 1.73
TARDBP-203ENST00000439080 KDM4FA0A1W2PPD8 638 aa25.85■■□□□ 1.73
TARDBP-203ENST00000439080 DHX29Q7Z478 1369 aaKnown RBP25.85■■□□□ 1.73
TARDBP-203ENST00000439080 KIF15Q9NS87 1388 aa25.85■■□□□ 1.73
TARDBP-203ENST00000439080 ANKRD30AQ9BXX3 1397 aa25.83■■□□□ 1.73
TARDBP-203ENST00000439080 CHIC2Q9UKJ5 165 aa25.82■■□□□ 1.72
TARDBP-203ENST00000439080 RNF17Q9BXT8 1623 aaKnown RBP25.82■■□□□ 1.72
TARDBP-203ENST00000439080 NCOA1Q15788 1441 aa25.81■■□□□ 1.72
TARDBP-203ENST00000439080 MLECQ14165 292 aa25.81■■□□□ 1.72
TARDBP-203ENST00000439080 ERBINQ96RT1 1412 aa25.79■■□□□ 1.72
TARDBP-203ENST00000439080 ITGAEP38570 1179 aa25.79■■□□□ 1.72
TARDBP-203ENST00000439080 RRP7BPQ9NSQ0 103 aa25.77■■□□□ 1.72
TARDBP-203ENST00000439080 ROCK1Q13464 1354 aa25.76■■□□□ 1.71
TARDBP-203ENST00000439080 CLTCQ00610 1675 aaKnown RBP25.76■■□□□ 1.71
TARDBP-203ENST00000439080 GCC2Q8IWJ2 1684 aa25.76■■□□□ 1.71
TARDBP-203ENST00000439080 DEPDC5O75140 1603 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms