RNA–Protein interactions for RNA: ENST00000438748.5

POLR1B-208, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-208ENST00000438748 NEO1Q92859 1461 aa19.32■□□□□ 0.68
POLR1B-208ENST00000438748 KDM6BO15054 1643 aa19.31■□□□□ 0.68
POLR1B-208ENST00000438748 EFCAB2Q5VUJ9 269 aa19.3■□□□□ 0.68
POLR1B-208ENST00000438748 CDC42BPBQ9Y5S2 1711 aa19.3■□□□□ 0.68
POLR1B-208ENST00000438748 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
POLR1B-208ENST00000438748 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
POLR1B-208ENST00000438748 PHLDB1Q86UU1 1377 aa19.28■□□□□ 0.68
POLR1B-208ENST00000438748 AKNAQ7Z591 1439 aa19.27■□□□□ 0.68
POLR1B-208ENST00000438748 CFDP1Q9UEE9 299 aaPredicted RBP19.27■□□□□ 0.68
POLR1B-208ENST00000438748 ZNF777Q9ULD5 760 aaPredicted RBP19.27■□□□□ 0.68
POLR1B-208ENST00000438748 ADGRL1O94910 1474 aa19.26■□□□□ 0.67
POLR1B-208ENST00000438748 MYOM3Q5VTT5 1437 aa19.24■□□□□ 0.67
POLR1B-208ENST00000438748 SAMD9LQ8IVG5 1584 aa19.22■□□□□ 0.67
POLR1B-208ENST00000438748 ABCC1P33527 1531 aa19.21■□□□□ 0.67
POLR1B-208ENST00000438748 DENND4BO75064 1496 aaPredicted RBP19.21■□□□□ 0.67
POLR1B-208ENST00000438748 SCAPERQ9BY12 1400 aa19.2■□□□□ 0.66
POLR1B-208ENST00000438748 PLEKHH2Q8IVE3 1493 aa19.2■□□□□ 0.66
POLR1B-208ENST00000438748 CAMSAP2Q08AD1 1489 aa19.18■□□□□ 0.66
POLR1B-208ENST00000438748 SYCP2Q9BX26 1530 aa19.18■□□□□ 0.66
POLR1B-208ENST00000438748 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
POLR1B-208ENST00000438748 COL17A1Q9UMD9 1497 aaPredicted RBP19.17■□□□□ 0.66
POLR1B-208ENST00000438748 POGZQ7Z3K3 1410 aa19.16■□□□□ 0.66
POLR1B-208ENST00000438748 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
POLR1B-208ENST00000438748 PTPN23Q9H3S7 1636 aa19.14■□□□□ 0.66
POLR1B-208ENST00000438748 RICTORQ6R327 1708 aa19.14■□□□□ 0.66
POLR1B-208ENST00000438748 RAPGEF3O95398 923 aa19.14■□□□□ 0.65
POLR1B-208ENST00000438748 ZNF518AQ6AHZ1 1483 aa19.14■□□□□ 0.65
POLR1B-208ENST00000438748 FRMPD1Q5SYB0 1578 aa19.14■□□□□ 0.65
POLR1B-208ENST00000438748 ZNF644Q9H582 1327 aaPredicted RBP19.13■□□□□ 0.65
POLR1B-208ENST00000438748 KIAA1107Q9UPP5 1409 aa19.12■□□□□ 0.65
POLR1B-208ENST00000438748 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
POLR1B-208ENST00000438748 ARHGEF12Q9NZN5 1544 aa19.11■□□□□ 0.65
POLR1B-208ENST00000438748 HNRNPMP52272 730 aaKnown RBP eCLIP19.11■□□□□ 0.65
POLR1B-208ENST00000438748 TRAPPC8Q9Y2L5 1435 aa19.09■□□□□ 0.65
POLR1B-208ENST00000438748 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
POLR1B-208ENST00000438748 ZMYM4Q5VZL5 1548 aa19.08■□□□□ 0.64
POLR1B-208ENST00000438748 CCDC141Q6ZP82 1450 aa19.08■□□□□ 0.64
POLR1B-208ENST00000438748 AFAP1Q8N556 730 aa19.07■□□□□ 0.64
POLR1B-208ENST00000438748 TCOF1Q13428 1488 aaKnown RBP19.07■□□□□ 0.64
POLR1B-208ENST00000438748 KDM5CP41229 1560 aa19.06■□□□□ 0.64
POLR1B-208ENST00000438748 HECW2Q9P2P5 1572 aa19.06■□□□□ 0.64
POLR1B-208ENST00000438748 ARHGEF5Q12774 1597 aa19.06■□□□□ 0.64
POLR1B-208ENST00000438748 ZFYVE16Q7Z3T8 1539 aa19.05■□□□□ 0.64
POLR1B-208ENST00000438748 MBD5Q9P267 1494 aa19.04■□□□□ 0.64
POLR1B-208ENST00000438748 ARHGEF40Q8TER5 1519 aa19.04■□□□□ 0.64
POLR1B-208ENST00000438748 SPAG9O60271 1321 aaKnown RBP19.03■□□□□ 0.64
POLR1B-208ENST00000438748 MAGI2Q86UL8 1455 aa19.03■□□□□ 0.64
POLR1B-208ENST00000438748 RSPH4AQ5TD94 716 aa19.02■□□□□ 0.64
POLR1B-208ENST00000438748 DNMT1P26358 1616 aaKnown RBP19.01■□□□□ 0.63
POLR1B-208ENST00000438748 ATP7AQ04656 1500 aa19■□□□□ 0.63
POLR1B-208ENST00000438748 TSPY4P0CV99 314 aa19■□□□□ 0.63
POLR1B-208ENST00000438748 TSPY10P0CW01 314 aa19■□□□□ 0.63
POLR1B-208ENST00000438748 MLH3Q9UHC1 1453 aa19■□□□□ 0.63
POLR1B-208ENST00000438748 CROCC2H7BZ55 1655 aa18.99■□□□□ 0.63
POLR1B-208ENST00000438748 INO80Q9ULG1 1556 aaPredicted RBP18.99■□□□□ 0.63
POLR1B-208ENST00000438748 DAPK1P53355 1430 aa18.99■□□□□ 0.63
POLR1B-208ENST00000438748 RRBP1Q9P2E9 1410 aaKnown RBP18.99■□□□□ 0.63
POLR1B-208ENST00000438748 YEATS2Q9ULM3 1422 aa18.99■□□□□ 0.63
POLR1B-208ENST00000438748 ABCA6Q8N139 1617 aa18.97■□□□□ 0.63
POLR1B-208ENST00000438748 KIDINS220Q9ULH0 1771 aa18.97■□□□□ 0.63
POLR1B-208ENST00000438748 C9orf84Q5VXU9 1444 aa18.97■□□□□ 0.63
POLR1B-208ENST00000438748 ABCC5O15440 1437 aa18.96■□□□□ 0.63
POLR1B-208ENST00000438748 DIP2CQ9Y2E4 1556 aa18.96■□□□□ 0.63
POLR1B-208ENST00000438748 SHANK2Q9UPX8 1470 aa18.96■□□□□ 0.63
POLR1B-208ENST00000438748 MAST1Q9Y2H9 1570 aa18.94■□□□□ 0.62
POLR1B-208ENST00000438748 RTEL1-TNFRSF6BF6WH68 1400 aa18.94■□□□□ 0.62
POLR1B-208ENST00000438748 ITGAEP38570 1179 aa18.94■□□□□ 0.62
POLR1B-208ENST00000438748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.93■□□□□ 0.62
POLR1B-208ENST00000438748 ATP10AO60312 1499 aa18.93■□□□□ 0.62
POLR1B-208ENST00000438748 ARID4BQ4LE39 1312 aaPredicted RBP18.91■□□□□ 0.62
POLR1B-208ENST00000438748 ADGBQ8N7X0 1667 aa18.91■□□□□ 0.62
POLR1B-208ENST00000438748 CHIC2Q9UKJ5 165 aa18.9■□□□□ 0.62
POLR1B-208ENST00000438748 PLXNC1O60486 1568 aa18.89■□□□□ 0.62
POLR1B-208ENST00000438748 A2MP01023 1474 aa18.88■□□□□ 0.61
POLR1B-208ENST00000438748 ANKRD30AQ9BXX3 1397 aa18.87■□□□□ 0.61
POLR1B-208ENST00000438748 REREQ9P2R6 1566 aa18.87■□□□□ 0.61
POLR1B-208ENST00000438748 KIF15Q9NS87 1388 aa18.85■□□□□ 0.61
POLR1B-208ENST00000438748 ADGRL2O95490 1459 aa18.84■□□□□ 0.61
POLR1B-208ENST00000438748 RRP7BPQ9NSQ0 103 aa18.83■□□□□ 0.6
POLR1B-208ENST00000438748 PTPRKQ15262 1439 aa18.83■□□□□ 0.6
POLR1B-208ENST00000438748 DUOX2Q9NRD8 1548 aa18.82■□□□□ 0.6
POLR1B-208ENST00000438748 SIGLEC1Q9BZZ2 1709 aa18.82■□□□□ 0.6
POLR1B-208ENST00000438748 MLECQ14165 292 aa18.81■□□□□ 0.6
POLR1B-208ENST00000438748 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
POLR1B-208ENST00000438748 AGLP35573 1532 aa18.8■□□□□ 0.6
POLR1B-208ENST00000438748 NCOA1Q15788 1441 aa18.8■□□□□ 0.6
POLR1B-208ENST00000438748 ROCK1Q13464 1354 aa18.79■□□□□ 0.6
POLR1B-208ENST00000438748 BCORL1Q5H9F3 1711 aa18.78■□□□□ 0.6
POLR1B-208ENST00000438748 ERBINQ96RT1 1412 aa18.77■□□□□ 0.6
POLR1B-208ENST00000438748 EIF2AK4Q9P2K8 1649 aaKnown RBP18.77■□□□□ 0.6
POLR1B-208ENST00000438748 KIF3BO15066 747 aa18.76■□□□□ 0.59
POLR1B-208ENST00000438748 GGT6Q6P531 493 aa18.73■□□□□ 0.59
POLR1B-208ENST00000438748 ESF1Q9H501 851 aaKnown RBP18.73■□□□□ 0.59
POLR1B-208ENST00000438748 ANKRD50Q9ULJ7 1429 aa18.73■□□□□ 0.59
POLR1B-208ENST00000438748 FER1L4A9Z1Z3 1794 aa18.72■□□□□ 0.59
POLR1B-208ENST00000438748 GCC2Q8IWJ2 1684 aa18.72■□□□□ 0.59
POLR1B-208ENST00000438748 MADDQ8WXG6 1647 aa18.71■□□□□ 0.59
POLR1B-208ENST00000438748 ADAMTSL3P82987 1691 aa18.7■□□□□ 0.58
POLR1B-208ENST00000438748 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
POLR1B-208ENST00000438748 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms