RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 TEX14Q8IWB6 1497 aa16.38■□□□□ 0.21
HLA-DMB-259ENST00000438510 CCNB3Q8WWL7 1395 aa16.38■□□□□ 0.21
HLA-DMB-259ENST00000438510 ARHGAP5Q13017 1502 aa16.36■□□□□ 0.21
HLA-DMB-259ENST00000438510 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
HLA-DMB-259ENST00000438510 PLCH2O75038 1416 aa16.36■□□□□ 0.21
HLA-DMB-259ENST00000438510 MYOM3Q5VTT5 1437 aa16.34■□□□□ 0.21
HLA-DMB-259ENST00000438510 FANCAO15360 1455 aa16.33■□□□□ 0.2
HLA-DMB-259ENST00000438510 NEO1Q92859 1461 aa16.33■□□□□ 0.2
HLA-DMB-259ENST00000438510 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
HLA-DMB-259ENST00000438510 PHLDB1Q86UU1 1377 aa16.3■□□□□ 0.2
HLA-DMB-259ENST00000438510 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
HLA-DMB-259ENST00000438510 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
HLA-DMB-259ENST00000438510 PTPN23Q9H3S7 1636 aa16.29■□□□□ 0.2
HLA-DMB-259ENST00000438510 EFCAB2Q5VUJ9 269 aa16.28■□□□□ 0.2
HLA-DMB-259ENST00000438510 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
HLA-DMB-259ENST00000438510 ABCC1P33527 1531 aa16.28■□□□□ 0.2
HLA-DMB-259ENST00000438510 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
HLA-DMB-259ENST00000438510 PLEKHH2Q8IVE3 1493 aa16.27■□□□□ 0.19
HLA-DMB-259ENST00000438510 CAMSAP2Q08AD1 1489 aa16.26■□□□□ 0.19
HLA-DMB-259ENST00000438510 AKNAQ7Z591 1439 aa16.26■□□□□ 0.19
HLA-DMB-259ENST00000438510 ADGRL1O94910 1474 aa16.25■□□□□ 0.19
HLA-DMB-259ENST00000438510 KDM6BO15054 1643 aa16.24■□□□□ 0.19
HLA-DMB-259ENST00000438510 TCOF1Q13428 1488 aaKnown RBP16.23■□□□□ 0.19
HLA-DMB-259ENST00000438510 RICTORQ6R327 1708 aa16.23■□□□□ 0.19
HLA-DMB-259ENST00000438510 SYCP2Q9BX26 1530 aa16.23■□□□□ 0.19
HLA-DMB-259ENST00000438510 ZNF777Q9ULD5 760 aaPredicted RBP16.22■□□□□ 0.19
HLA-DMB-259ENST00000438510 ARHGEF5Q12774 1597 aa16.21■□□□□ 0.18
HLA-DMB-259ENST00000438510 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.18
HLA-DMB-259ENST00000438510 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
HLA-DMB-259ENST00000438510 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
HLA-DMB-259ENST00000438510 DENND4BO75064 1496 aaPredicted RBP16.19■□□□□ 0.18
HLA-DMB-259ENST00000438510 DNMT1P26358 1616 aaKnown RBP16.19■□□□□ 0.18
HLA-DMB-259ENST00000438510 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
HLA-DMB-259ENST00000438510 POGZQ7Z3K3 1410 aa16.18■□□□□ 0.18
HLA-DMB-259ENST00000438510 FRMPD1Q5SYB0 1578 aa16.17■□□□□ 0.18
HLA-DMB-259ENST00000438510 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
HLA-DMB-259ENST00000438510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.18
HLA-DMB-259ENST00000438510 ARHGEF12Q9NZN5 1544 aa16.16■□□□□ 0.18
HLA-DMB-259ENST00000438510 KDM5CP41229 1560 aa16.16■□□□□ 0.18
HLA-DMB-259ENST00000438510 ZNF644Q9H582 1327 aaPredicted RBP16.16■□□□□ 0.18
HLA-DMB-259ENST00000438510 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
HLA-DMB-259ENST00000438510 ZMYM4Q5VZL5 1548 aa16.15■□□□□ 0.18
HLA-DMB-259ENST00000438510 HECW2Q9P2P5 1572 aa16.15■□□□□ 0.18
HLA-DMB-259ENST00000438510 MBD5Q9P267 1494 aa16.15■□□□□ 0.18
HLA-DMB-259ENST00000438510 ADGBQ8N7X0 1667 aa16.14■□□□□ 0.17
HLA-DMB-259ENST00000438510 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
HLA-DMB-259ENST00000438510 RSPH4AQ5TD94 716 aa16.13■□□□□ 0.17
HLA-DMB-259ENST00000438510 INO80Q9ULG1 1556 aaPredicted RBP16.13■□□□□ 0.17
HLA-DMB-259ENST00000438510 MAST1Q9Y2H9 1570 aa16.13■□□□□ 0.17
HLA-DMB-259ENST00000438510 TRAPPC8Q9Y2L5 1435 aa16.12■□□□□ 0.17
HLA-DMB-259ENST00000438510 COL17A1Q9UMD9 1497 aaPredicted RBP16.12■□□□□ 0.17
HLA-DMB-259ENST00000438510 SHANK2Q9UPX8 1470 aa16.11■□□□□ 0.17
HLA-DMB-259ENST00000438510 HNRNPMP52272 730 aaKnown RBP eCLIP16.11■□□□□ 0.17
HLA-DMB-259ENST00000438510 DAPK1P53355 1430 aa16.11■□□□□ 0.17
HLA-DMB-259ENST00000438510 KIDINS220Q9ULH0 1771 aa16.1■□□□□ 0.17
HLA-DMB-259ENST00000438510 ATP7AQ04656 1500 aa16.09■□□□□ 0.17
HLA-DMB-259ENST00000438510 ZFYVE16Q7Z3T8 1539 aa16.09■□□□□ 0.17
HLA-DMB-259ENST00000438510 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
HLA-DMB-259ENST00000438510 RAPGEF3O95398 923 aa16.08■□□□□ 0.16
HLA-DMB-259ENST00000438510 ABCC5O15440 1437 aa16.08■□□□□ 0.16
HLA-DMB-259ENST00000438510 MLH3Q9UHC1 1453 aa16.08■□□□□ 0.16
HLA-DMB-259ENST00000438510 ARHGEF40Q8TER5 1519 aa16.07■□□□□ 0.16
HLA-DMB-259ENST00000438510 PLXNC1O60486 1568 aa16.07■□□□□ 0.16
HLA-DMB-259ENST00000438510 C9orf84Q5VXU9 1444 aa16.06■□□□□ 0.16
HLA-DMB-259ENST00000438510 AFAP1Q8N556 730 aa16.06■□□□□ 0.16
HLA-DMB-259ENST00000438510 ABCA6Q8N139 1617 aa16.05■□□□□ 0.16
HLA-DMB-259ENST00000438510 RTEL1-TNFRSF6BF6WH68 1400 aa16.05■□□□□ 0.16
HLA-DMB-259ENST00000438510 SPAG9O60271 1321 aaKnown RBP16.05■□□□□ 0.16
HLA-DMB-259ENST00000438510 TSPY4P0CV99 314 aa16.05■□□□□ 0.16
HLA-DMB-259ENST00000438510 TSPY10P0CW01 314 aa16.05■□□□□ 0.16
HLA-DMB-259ENST00000438510 DIP2CQ9Y2E4 1556 aa16.04■□□□□ 0.16
HLA-DMB-259ENST00000438510 ADGRL2O95490 1459 aa16.03■□□□□ 0.16
HLA-DMB-259ENST00000438510 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
HLA-DMB-259ENST00000438510 GCC2Q8IWJ2 1684 aa16.01■□□□□ 0.15
HLA-DMB-259ENST00000438510 REREQ9P2R6 1566 aa16■□□□□ 0.15
HLA-DMB-259ENST00000438510 ITGAEP38570 1179 aa15.99■□□□□ 0.15
HLA-DMB-259ENST00000438510 YEATS2Q9ULM3 1422 aa15.99■□□□□ 0.15
HLA-DMB-259ENST00000438510 ANKRD30AQ9BXX3 1397 aa15.99■□□□□ 0.15
HLA-DMB-259ENST00000438510 PTPRKQ15262 1439 aa15.98■□□□□ 0.15
HLA-DMB-259ENST00000438510 ROCK1Q13464 1354 aa15.98■□□□□ 0.15
HLA-DMB-259ENST00000438510 DUOX2Q9NRD8 1548 aa15.97■□□□□ 0.15
HLA-DMB-259ENST00000438510 EIF2AK4Q9P2K8 1649 aaKnown RBP15.97■□□□□ 0.15
HLA-DMB-259ENST00000438510 ATP10AO60312 1499 aa15.97■□□□□ 0.15
HLA-DMB-259ENST00000438510 TRIM26Q12899 539 aaPredicted RBP15.96■□□□□ 0.15
HLA-DMB-259ENST00000438510 NCOA1Q15788 1441 aa15.95■□□□□ 0.14
HLA-DMB-259ENST00000438510 BCORL1Q5H9F3 1711 aa15.95■□□□□ 0.14
HLA-DMB-259ENST00000438510 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
HLA-DMB-259ENST00000438510 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
HLA-DMB-259ENST00000438510 A2MP01023 1474 aa15.95■□□□□ 0.14
HLA-DMB-259ENST00000438510 SIGLEC1Q9BZZ2 1709 aa15.92■□□□□ 0.14
HLA-DMB-259ENST00000438510 ERBINQ96RT1 1412 aa15.92■□□□□ 0.14
HLA-DMB-259ENST00000438510 AGLP35573 1532 aa15.91■□□□□ 0.14
HLA-DMB-259ENST00000438510 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
HLA-DMB-259ENST00000438510 DHX29Q7Z478 1369 aaKnown RBP15.89■□□□□ 0.13
HLA-DMB-259ENST00000438510 RRP7BPQ9NSQ0 103 aa15.89■□□□□ 0.13
HLA-DMB-259ENST00000438510 RNF17Q9BXT8 1623 aaKnown RBP15.89■□□□□ 0.13
HLA-DMB-259ENST00000438510 NAIPQ13075 1403 aa15.88■□□□□ 0.13
HLA-DMB-259ENST00000438510 DEPDC5O75140 1603 aa15.88■□□□□ 0.13
HLA-DMB-259ENST00000438510 ANKRD50Q9ULJ7 1429 aa15.87■□□□□ 0.13
HLA-DMB-259ENST00000438510 UNC13BO14795 1591 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms