RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 ARSIQ5FYB1 569 aa13.31□□□□□ -0.28
HMGN1P6-201ENST00000438508 HCSTQ9UBK5 93 aa13.31□□□□□ -0.28
HMGN1P6-201ENST00000438508 PBX2P40425 430 aa13.29□□□□□ -0.28
HMGN1P6-201ENST00000438508 EFCAB3Q8N7B9 438 aa13.29□□□□□ -0.28
HMGN1P6-201ENST00000438508 SOX12O15370 315 aa13.21□□□□□ -0.29
HMGN1P6-201ENST00000438508 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
HMGN1P6-201ENST00000438508 KHSRPQ92945 711 aaKnown RBP eCLIP13.17□□□□□ -0.3
HMGN1P6-201ENST00000438508 POTEEQ6S8J3 1075 aa13.16□□□□□ -0.3
HMGN1P6-201ENST00000438508 MS4A4AQ96JQ5 239 aa13.16□□□□□ -0.3
HMGN1P6-201ENST00000438508 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
HMGN1P6-201ENST00000438508 CIZ1Q9ULV3 898 aaPredicted RBP13.14□□□□□ -0.31
HMGN1P6-201ENST00000438508 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
HMGN1P6-201ENST00000438508 RGS20O76081 388 aa13.09□□□□□ -0.31
HMGN1P6-201ENST00000438508 ADGRD1Q6QNK2 874 aa13.06□□□□□ -0.32
HMGN1P6-201ENST00000438508 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
HMGN1P6-201ENST00000438508 SLC34A2O95436 690 aa13.03□□□□□ -0.32
HMGN1P6-201ENST00000438508 NUDT7P0C024 238 aa13.03□□□□□ -0.32
HMGN1P6-201ENST00000438508 LHX6Q9UPM6 363 aa13.03□□□□□ -0.32
HMGN1P6-201ENST00000438508 TK2O00142 265 aa13.02□□□□□ -0.33
HMGN1P6-201ENST00000438508 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
HMGN1P6-201ENST00000438508 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
HMGN1P6-201ENST00000438508 KIF3CO14782 793 aa13.01□□□□□ -0.33
HMGN1P6-201ENST00000438508 MYO15BQ96JP2 1530 aa13.01□□□□□ -0.33
HMGN1P6-201ENST00000438508 ARHGAP33O14559 1287 aa13□□□□□ -0.33
HMGN1P6-201ENST00000438508 HRO43593 1189 aa12.99□□□□□ -0.33
HMGN1P6-201ENST00000438508 DCAF8L2P0C7V8 631 aa12.98□□□□□ -0.33
HMGN1P6-201ENST00000438508 IFFO2Q5TF58 517 aa12.98□□□□□ -0.33
HMGN1P6-201ENST00000438508 PSDA5PKW4 1024 aaPredicted RBP12.96□□□□□ -0.33
HMGN1P6-201ENST00000438508 PCDHGA4Q9Y5G9 962 aa12.96□□□□□ -0.33
HMGN1P6-201ENST00000438508 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
HMGN1P6-201ENST00000438508 NLRP6P59044 892 aa12.91□□□□□ -0.34
HMGN1P6-201ENST00000438508 C2orf72A6NCS6 295 aa12.9□□□□□ -0.34
HMGN1P6-201ENST00000438508 RIOK3O14730 519 aaKnown RBP12.9□□□□□ -0.34
HMGN1P6-201ENST00000438508 FBXO22Q8NEZ5 403 aa12.9□□□□□ -0.34
HMGN1P6-201ENST00000438508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
HMGN1P6-201ENST00000438508 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
HMGN1P6-201ENST00000438508 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
HMGN1P6-201ENST00000438508 ABCC9O60706 1549 aa12.87□□□□□ -0.35
HMGN1P6-201ENST00000438508 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
HMGN1P6-201ENST00000438508 NACADO15069 1562 aa12.85□□□□□ -0.35
HMGN1P6-201ENST00000438508 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
HMGN1P6-201ENST00000438508 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
HMGN1P6-201ENST00000438508 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
HMGN1P6-201ENST00000438508 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P6-201ENST00000438508 A0A0G2JS52 829 aa12.78□□□□□ -0.36
HMGN1P6-201ENST00000438508 PSEN2P49810 448 aa12.76□□□□□ -0.37
HMGN1P6-201ENST00000438508 STAC3Q96MF2 364 aa12.75□□□□□ -0.37
HMGN1P6-201ENST00000438508 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
HMGN1P6-201ENST00000438508 MFRPQ9BY79 579 aa12.72□□□□□ -0.37
HMGN1P6-201ENST00000438508 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
HMGN1P6-201ENST00000438508 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
HMGN1P6-201ENST00000438508 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
HMGN1P6-201ENST00000438508 PTPN5P54829 565 aa12.67□□□□□ -0.38
HMGN1P6-201ENST00000438508 VPS9D1Q9Y2B5 631 aa12.66□□□□□ -0.38
HMGN1P6-201ENST00000438508 SLC4A5Q9BY07 1137 aa12.65□□□□□ -0.38
HMGN1P6-201ENST00000438508 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
HMGN1P6-201ENST00000438508 THSD4Q6ZMP0 1018 aa12.63□□□□□ -0.39
HMGN1P6-201ENST00000438508 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
HMGN1P6-201ENST00000438508 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
HMGN1P6-201ENST00000438508 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
HMGN1P6-201ENST00000438508 SCRIBQ14160 1630 aa12.58□□□□□ -0.4
HMGN1P6-201ENST00000438508 KCNK17Q96T54 332 aa12.57□□□□□ -0.4
HMGN1P6-201ENST00000438508 Q6ZNB5 142 aa12.55□□□□□ -0.4
HMGN1P6-201ENST00000438508 STK24Q9Y6E0 443 aa12.55□□□□□ -0.4
HMGN1P6-201ENST00000438508 TBC1D12O60347 775 aa12.52□□□□□ -0.41
HMGN1P6-201ENST00000438508 FOXK1P85037 733 aa12.52□□□□□ -0.41
HMGN1P6-201ENST00000438508 ITGBL1O95965 494 aaPredicted RBP12.5□□□□□ -0.41
HMGN1P6-201ENST00000438508 WNT2BQ93097 391 aa12.48□□□□□ -0.41
HMGN1P6-201ENST00000438508 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
HMGN1P6-201ENST00000438508 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
HMGN1P6-201ENST00000438508 LAPTM4AQ15012 233 aa12.45□□□□□ -0.42
HMGN1P6-201ENST00000438508 PLPP6Q8IY26 295 aa12.45□□□□□ -0.42
HMGN1P6-201ENST00000438508 UNC13AQ9UPW8 1703 aa12.45□□□□□ -0.42
HMGN1P6-201ENST00000438508 GOLGA8CPA6NN73 597 aa12.44□□□□□ -0.42
HMGN1P6-201ENST00000438508 STK25O00506 426 aa12.43□□□□□ -0.42
HMGN1P6-201ENST00000438508 MRPL50Q8N5N7 158 aaKnown RBP12.42□□□□□ -0.42
HMGN1P6-201ENST00000438508 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
HMGN1P6-201ENST00000438508 ZBED2Q9BTP6 218 aa12.41□□□□□ -0.42
HMGN1P6-201ENST00000438508 LCE2BO14633 110 aa12.39□□□□□ -0.43
HMGN1P6-201ENST00000438508 PPP1R37O75864 691 aa12.39□□□□□ -0.43
HMGN1P6-201ENST00000438508 PTPREP23469 700 aa12.37□□□□□ -0.43
HMGN1P6-201ENST00000438508 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
HMGN1P6-201ENST00000438508 TRAF7Q6Q0C0 670 aa12.35□□□□□ -0.43
HMGN1P6-201ENST00000438508 DSG2Q14126 1118 aa12.34□□□□□ -0.43
HMGN1P6-201ENST00000438508 ZNF454Q8N9F8 522 aa12.34□□□□□ -0.43
HMGN1P6-201ENST00000438508 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
HMGN1P6-201ENST00000438508 RSF1Q96T23 1441 aaPredicted RBP12.32□□□□□ -0.44
HMGN1P6-201ENST00000438508 FOSBP53539 338 aa12.32□□□□□ -0.44
HMGN1P6-201ENST00000438508 NYAP1Q6ZVC0 841 aa12.32□□□□□ -0.44
HMGN1P6-201ENST00000438508 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
HMGN1P6-201ENST00000438508 CECR2Q9BXF3 1484 aa12.28□□□□□ -0.44
HMGN1P6-201ENST00000438508 KCNC4Q03721 635 aa12.25□□□□□ -0.45
HMGN1P6-201ENST00000438508 ANKK1Q8NFD2 765 aa12.25□□□□□ -0.45
HMGN1P6-201ENST00000438508 ANO8Q9HCE9 1232 aaPredicted RBP12.25□□□□□ -0.45
HMGN1P6-201ENST00000438508 GFRA3O60609 400 aa12.23□□□□□ -0.45
HMGN1P6-201ENST00000438508 JPH4Q96JJ6 628 aa12.23□□□□□ -0.45
HMGN1P6-201ENST00000438508 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
HMGN1P6-201ENST00000438508 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
HMGN1P6-201ENST00000438508 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
HMGN1P6-201ENST00000438508 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms