RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
NCSTN-208ENST00000438008 RICTORQ6R327 1708 aa28.29■■■□□ 2.12
NCSTN-208ENST00000438008 PREX2Q70Z35 1606 aa28.27■■■□□ 2.12
NCSTN-208ENST00000438008 POGZQ7Z3K3 1410 aa28.26■■■□□ 2.12
NCSTN-208ENST00000438008 EHBP1L1Q8N3D4 1523 aa28.26■■■□□ 2.11
NCSTN-208ENST00000438008 CDC42BPBQ9Y5S2 1711 aa28.26■■■□□ 2.11
NCSTN-208ENST00000438008 ZMYM4Q5VZL5 1548 aa28.24■■■□□ 2.11
NCSTN-208ENST00000438008 GPATCH8Q9UKJ3 1502 aaKnown RBP28.24■■■□□ 2.11
NCSTN-208ENST00000438008 MAGI2Q86UL8 1455 aa28.21■■■□□ 2.11
NCSTN-208ENST00000438008 CDC42BPAQ5VT25 1732 aa28.21■■■□□ 2.11
NCSTN-208ENST00000438008 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
NCSTN-208ENST00000438008 CCNB3Q8WWL7 1395 aa28.2■■■□□ 2.1
NCSTN-208ENST00000438008 MAP3K1Q13233 1512 aa28.18■■■□□ 2.1
NCSTN-208ENST00000438008 ZNF518AQ6AHZ1 1483 aa28.17■■■□□ 2.1
NCSTN-208ENST00000438008 ARHGEF40Q8TER5 1519 aa28.16■■■□□ 2.1
NCSTN-208ENST00000438008 ABCC1P33527 1531 aa28.15■■■□□ 2.1
NCSTN-208ENST00000438008 CFDP1Q9UEE9 299 aaPredicted RBP28.15■■■□□ 2.1
NCSTN-208ENST00000438008 AFAP1Q8N556 730 aa28.14■■■□□ 2.1
NCSTN-208ENST00000438008 ZFYVE16Q7Z3T8 1539 aa28.13■■■□□ 2.09
NCSTN-208ENST00000438008 ARHGEF12Q9NZN5 1544 aa28.13■■■□□ 2.09
NCSTN-208ENST00000438008 LRRC9Q6ZRR7 1453 aa28.13■■■□□ 2.09
NCSTN-208ENST00000438008 YEATS2Q9ULM3 1422 aa28.12■■■□□ 2.09
NCSTN-208ENST00000438008 KDM5CP41229 1560 aa28.11■■■□□ 2.09
NCSTN-208ENST00000438008 ZNF777Q9ULD5 760 aaPredicted RBP28.11■■■□□ 2.09
NCSTN-208ENST00000438008 NCOA2Q15596 1464 aa28.1■■■□□ 2.09
NCSTN-208ENST00000438008 TRAPPC8Q9Y2L5 1435 aa28.09■■■□□ 2.09
NCSTN-208ENST00000438008 SAMD9LQ8IVG5 1584 aa28.09■■■□□ 2.09
NCSTN-208ENST00000438008 KIAA1107Q9UPP5 1409 aa28.09■■■□□ 2.09
NCSTN-208ENST00000438008 SUPT6HQ7KZ85 1726 aaKnown RBP28.07■■■□□ 2.08
NCSTN-208ENST00000438008 PLEKHH2Q8IVE3 1493 aa28.07■■■□□ 2.08
NCSTN-208ENST00000438008 KANK4Q5T7N3 995 aaPredicted RBP28.06■■■□□ 2.08
NCSTN-208ENST00000438008 ITSN2Q9NZM3 1697 aa28.06■■■□□ 2.08
NCSTN-208ENST00000438008 MLH3Q9UHC1 1453 aa28.05■■■□□ 2.08
NCSTN-208ENST00000438008 ATP10AO60312 1499 aa28.03■■■□□ 2.08
NCSTN-208ENST00000438008 ARID4BQ4LE39 1312 aaPredicted RBP28.03■■■□□ 2.08
NCSTN-208ENST00000438008 APLP2Q06481 763 aa28.03■■■□□ 2.08
NCSTN-208ENST00000438008 HNRNPMP52272 730 aaKnown RBP eCLIP28.02■■■□□ 2.08
NCSTN-208ENST00000438008 SYCP2Q9BX26 1530 aa28.02■■■□□ 2.08
NCSTN-208ENST00000438008 HECW2Q9P2P5 1572 aa28.01■■■□□ 2.07
NCSTN-208ENST00000438008 C9orf84Q5VXU9 1444 aa27.99■■■□□ 2.07
NCSTN-208ENST00000438008 ZNF644Q9H582 1327 aaPredicted RBP27.98■■■□□ 2.07
NCSTN-208ENST00000438008 MYT1LQ9UL68 1186 aa27.97■■■□□ 2.07
NCSTN-208ENST00000438008 ADAMTSL3P82987 1691 aa27.97■■■□□ 2.07
NCSTN-208ENST00000438008 BCORL1Q5H9F3 1711 aa27.96■■■□□ 2.07
NCSTN-208ENST00000438008 MBD5Q9P267 1494 aa27.94■■■□□ 2.06
NCSTN-208ENST00000438008 DIP2CQ9Y2E4 1556 aa27.93■■■□□ 2.06
NCSTN-208ENST00000438008 SPAG9O60271 1321 aaKnown RBP27.92■■■□□ 2.06
NCSTN-208ENST00000438008 SIGLEC1Q9BZZ2 1709 aa27.92■■■□□ 2.06
NCSTN-208ENST00000438008 REREQ9P2R6 1566 aa27.91■■■□□ 2.06
NCSTN-208ENST00000438008 KIDINS220Q9ULH0 1771 aa27.9■■■□□ 2.06
NCSTN-208ENST00000438008 ABCA6Q8N139 1617 aa27.89■■■□□ 2.06
NCSTN-208ENST00000438008 CAMSAP2Q08AD1 1489 aa27.88■■■□□ 2.05
NCSTN-208ENST00000438008 MYOM3Q5VTT5 1437 aa27.87■■■□□ 2.05
NCSTN-208ENST00000438008 RSPH4AQ5TD94 716 aa27.87■■■□□ 2.05
NCSTN-208ENST00000438008 MIA2Q96PC5 1412 aa27.86■■■□□ 2.05
NCSTN-208ENST00000438008 PTPRMP28827 1452 aa27.84■■■□□ 2.05
NCSTN-208ENST00000438008 MADDQ8WXG6 1647 aa27.84■■■□□ 2.05
NCSTN-208ENST00000438008 AGLP35573 1532 aa27.83■■■□□ 2.05
NCSTN-208ENST00000438008 ATP7AQ04656 1500 aa27.83■■■□□ 2.05
NCSTN-208ENST00000438008 INO80Q9ULG1 1556 aaPredicted RBP27.83■■■□□ 2.05
NCSTN-208ENST00000438008 MLECQ14165 292 aa27.82■■■□□ 2.04
NCSTN-208ENST00000438008 RTEL1-TNFRSF6BF6WH68 1400 aa27.82■■■□□ 2.04
NCSTN-208ENST00000438008 CCDC141Q6ZP82 1450 aa27.81■■■□□ 2.04
NCSTN-208ENST00000438008 ARHGEF5Q12774 1597 aa27.78■■■□□ 2.04
NCSTN-208ENST00000438008 A2MP01023 1474 aa27.74■■■□□ 2.03
NCSTN-208ENST00000438008 RIMS1Q86UR5 1692 aaKnown RBP27.73■■■□□ 2.03
NCSTN-208ENST00000438008 TSPY4P0CV99 314 aa27.72■■■□□ 2.03
NCSTN-208ENST00000438008 TSPY10P0CW01 314 aa27.72■■■□□ 2.03
NCSTN-208ENST00000438008 PLXNC1O60486 1568 aa27.71■■■□□ 2.03
NCSTN-208ENST00000438008 FGD6Q6ZV73 1430 aa27.69■■■□□ 2.02
NCSTN-208ENST00000438008 FER1L4A9Z1Z3 1794 aa27.68■■■□□ 2.02
NCSTN-208ENST00000438008 ADGBQ8N7X0 1667 aa27.67■■■□□ 2.02
NCSTN-208ENST00000438008 DHX29Q7Z478 1369 aaKnown RBP27.66■■■□□ 2.02
NCSTN-208ENST00000438008 TCOF1Q13428 1488 aaKnown RBP27.65■■■□□ 2.02
NCSTN-208ENST00000438008 PTPN23Q9H3S7 1636 aa27.65■■■□□ 2.02
NCSTN-208ENST00000438008 MAST1Q9Y2H9 1570 aa27.64■■■□□ 2.01
NCSTN-208ENST00000438008 ESF1Q9H501 851 aaKnown RBP27.6■■■□□ 2.01
NCSTN-208ENST00000438008 CNTLNQ9NXG0 1405 aa27.59■■■□□ 2.01
NCSTN-208ENST00000438008 ABCC5O15440 1437 aa27.58■■■□□ 2.01
NCSTN-208ENST00000438008 PPP6R1Q9UPN7 881 aa27.58■■■□□ 2.01
NCSTN-208ENST00000438008 PLPPR3Q6T4P5 718 aa27.56■■■□□ 2
NCSTN-208ENST00000438008 SHANK2Q9UPX8 1470 aa27.56■■■□□ 2
NCSTN-208ENST00000438008 CEBPAP49715 358 aaPredicted RBP27.55■■■□□ 2
NCSTN-208ENST00000438008 GGT6Q6P531 493 aa27.55■■■□□ 2
NCSTN-208ENST00000438008 DAPK1P53355 1430 aa27.54■■■□□ 2
NCSTN-208ENST00000438008 KIF3BO15066 747 aa27.52■■■□□ 2
NCSTN-208ENST00000438008 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
NCSTN-208ENST00000438008 LMTK3Q96Q04 1460 aa27.49■■□□□ 1.99
NCSTN-208ENST00000438008 CROCC2H7BZ55 1655 aa27.48■■□□□ 1.99
NCSTN-208ENST00000438008 ZMYM3Q14202 1370 aa27.48■■□□□ 1.99
NCSTN-208ENST00000438008 FAM50AQ14320 339 aaKnown RBP27.47■■□□□ 1.99
NCSTN-208ENST00000438008 MROH2AA6NES4 1674 aa27.46■■□□□ 1.99
NCSTN-208ENST00000438008 C3P01024 1663 aa27.46■■□□□ 1.99
NCSTN-208ENST00000438008 PPARGC1BQ86YN6 1023 aaKnown RBP27.45■■□□□ 1.98
NCSTN-208ENST00000438008 DUOX2Q9NRD8 1548 aa27.45■■□□□ 1.98
NCSTN-208ENST00000438008 KIF15Q9NS87 1388 aa27.44■■□□□ 1.98
NCSTN-208ENST00000438008 FAM135AQ9P2D6 1515 aa27.42■■□□□ 1.98
NCSTN-208ENST00000438008 CLTCQ00610 1675 aaKnown RBP27.41■■□□□ 1.98
NCSTN-208ENST00000438008 ANKRD30AQ9BXX3 1397 aa27.41■■□□□ 1.98
NCSTN-208ENST00000438008 RRP7BPQ9NSQ0 103 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms