RNA–Protein interactions for RNA: ENST00000436803.5

LINC00472-204, long intergenic non-protein coding RNA 472, humanhuman

TSL 5 BASIC

Gene LINC00472, Length 667 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-204ENST00000436803 MAGI2Q86UL8 1455 aa36.5■■■■□ 3.43
LINC00472-204ENST00000436803 LRRIQ1Q96JM4 1722 aa36.5■■■■□ 3.43
LINC00472-204ENST00000436803 FMN1Q68DA7 1419 aa36.49■■■■□ 3.43
LINC00472-204ENST00000436803 SCAPERQ9BY12 1400 aa36.49■■■■□ 3.43
LINC00472-204ENST00000436803 UBTFP17480 764 aaKnown RBP36.48■■■■□ 3.43
LINC00472-204ENST00000436803 ATP1B4Q9UN42 357 aaPredicted RBP36.45■■■■□ 3.43
LINC00472-204ENST00000436803 PLPPR3Q6T4P5 718 aa36.44■■■■□ 3.42
LINC00472-204ENST00000436803 FBXO41Q8TF61 875 aa36.43■■■■□ 3.42
LINC00472-204ENST00000436803 MLECQ14165 292 aa36.39■■■■□ 3.42
LINC00472-204ENST00000436803 HSPA2P54652 639 aa36.36■■■■□ 3.41
LINC00472-204ENST00000436803 TROQ12816 1431 aaPredicted RBP36.34■■■■□ 3.41
LINC00472-204ENST00000436803 ATP10AO60312 1499 aa36.33■■■■□ 3.41
LINC00472-204ENST00000436803 ARHGEF12Q9NZN5 1544 aa36.33■■■■□ 3.41
LINC00472-204ENST00000436803 C9orf84Q5VXU9 1444 aa36.32■■■■□ 3.4
LINC00472-204ENST00000436803 ARHGAP5Q13017 1502 aa36.31■■■■□ 3.4
LINC00472-204ENST00000436803 EFCAB2Q5VUJ9 269 aa36.31■■■■□ 3.4
LINC00472-204ENST00000436803 CHIC1Q5VXU3 224 aa36.3■■■■□ 3.4
LINC00472-204ENST00000436803 CDC42BPBQ9Y5S2 1711 aa36.3■■■■□ 3.4
LINC00472-204ENST00000436803 CDK11AQ9UQ88 783 aaPredicted RBP36.29■■■■□ 3.4
LINC00472-204ENST00000436803 KDM5CP41229 1560 aa36.28■■■■□ 3.4
LINC00472-204ENST00000436803 ZNF518AQ6AHZ1 1483 aa36.26■■■■□ 3.4
LINC00472-204ENST00000436803 CLIP1P30622 1438 aa36.24■■■■□ 3.39
LINC00472-204ENST00000436803 PREX1Q8TCU6 1659 aa36.23■■■■□ 3.39
LINC00472-204ENST00000436803 DIP2CQ9Y2E4 1556 aa36.21■■■■□ 3.39
LINC00472-204ENST00000436803 PREX2Q70Z35 1606 aa36.2■■■■□ 3.39
LINC00472-204ENST00000436803 ABCA6Q8N139 1617 aa36.18■■■■□ 3.38
LINC00472-204ENST00000436803 AFAP1Q8N556 730 aa36.17■■■■□ 3.38
LINC00472-204ENST00000436803 ITSN2Q9NZM3 1697 aa36.14■■■■□ 3.38
LINC00472-204ENST00000436803 ABCC1P33527 1531 aa36.12■■■■□ 3.37
LINC00472-204ENST00000436803 CDC42BPAQ5VT25 1732 aa36.11■■■■□ 3.37
LINC00472-204ENST00000436803 REREQ9P2R6 1566 aa36.11■■■■□ 3.37
LINC00472-204ENST00000436803 CEBPAP49715 358 aaPredicted RBP36.11■■■■□ 3.37
LINC00472-204ENST00000436803 CCDC18Q5T9S5 1454 aa36.1■■■■□ 3.37
LINC00472-204ENST00000436803 CASKIN1Q8WXD9 1431 aa36.09■■■■□ 3.37
LINC00472-204ENST00000436803 MYT1LQ9UL68 1186 aa36.06■■■■□ 3.36
LINC00472-204ENST00000436803 TRAPPC8Q9Y2L5 1435 aa36.06■■■■□ 3.36
LINC00472-204ENST00000436803 MLH3Q9UHC1 1453 aa36.05■■■■□ 3.36
LINC00472-204ENST00000436803 STRCQ7RTU9 1775 aa36.04■■■■□ 3.36
LINC00472-204ENST00000436803 C3P01024 1663 aa36.04■■■■□ 3.36
LINC00472-204ENST00000436803 SETD1BQ9UPS6 1966 aaKnown RBP36.04■■■■□ 3.36
LINC00472-204ENST00000436803 KIDINS220Q9ULH0 1771 aa36.03■■■■□ 3.36
LINC00472-204ENST00000436803 AGLP35573 1532 aa35.97■■■■□ 3.35
LINC00472-204ENST00000436803 CERKQ8TCT0 537 aa35.96■■■■□ 3.35
LINC00472-204ENST00000436803 FYCO1Q9BQS8 1478 aa35.96■■■■□ 3.35
LINC00472-204ENST00000436803 UHRF1BP1Q6BDS2 1440 aa35.94■■■■□ 3.34
LINC00472-204ENST00000436803 SAMD9LQ8IVG5 1584 aa35.92■■■■□ 3.34
LINC00472-204ENST00000436803 SYCP2Q9BX26 1530 aa35.87■■■■□ 3.33
LINC00472-204ENST00000436803 SUPT6HQ7KZ85 1726 aaKnown RBP35.81■■■■□ 3.32
LINC00472-204ENST00000436803 GPATCH8Q9UKJ3 1502 aaKnown RBP35.81■■■■□ 3.32
LINC00472-204ENST00000436803 ZNF777Q9ULD5 760 aaPredicted RBP35.79■■■■□ 3.32
LINC00472-204ENST00000436803 MROH2AA6NES4 1674 aa35.77■■■■□ 3.32
LINC00472-204ENST00000436803 ESF1Q9H501 851 aaKnown RBP35.76■■■■□ 3.32
LINC00472-204ENST00000436803 CNTLNQ9NXG0 1405 aa35.74■■■■□ 3.31
LINC00472-204ENST00000436803 INO80Q9ULG1 1556 aaPredicted RBP35.73■■■■□ 3.31
LINC00472-204ENST00000436803 DMRT2Q9Y5R5 561 aa35.73■■■■□ 3.31
LINC00472-204ENST00000436803 ATP7AQ04656 1500 aa35.73■■■■□ 3.31
LINC00472-204ENST00000436803 HNRNPMP52272 730 aaKnown RBP eCLIP35.7■■■■□ 3.31
LINC00472-204ENST00000436803 CLTCQ00610 1675 aaKnown RBP35.68■■■■□ 3.3
LINC00472-204ENST00000436803 PTPRTO14522 1441 aa35.68■■■■□ 3.3
LINC00472-204ENST00000436803 SPAG9O60271 1321 aaKnown RBP35.68■■■■□ 3.3
LINC00472-204ENST00000436803 PLXNC1O60486 1568 aa35.68■■■■□ 3.3
LINC00472-204ENST00000436803 KIAA1107Q9UPP5 1409 aa35.64■■■■□ 3.3
LINC00472-204ENST00000436803 NCOA1Q15788 1441 aa35.63■■■■□ 3.29
LINC00472-204ENST00000436803 PLEKHH2Q8IVE3 1493 aa35.62■■■■□ 3.29
LINC00472-204ENST00000436803 CCNB3Q8WWL7 1395 aa35.62■■■■□ 3.29
LINC00472-204ENST00000436803 TIAM1Q13009 1591 aa35.6■■■■□ 3.29
LINC00472-204ENST00000436803 NPATQ14207 1427 aa35.6■■■■□ 3.29
LINC00472-204ENST00000436803 CFDP1Q9UEE9 299 aaPredicted RBP35.6■■■■□ 3.29
LINC00472-204ENST00000436803 CAMSAP1Q5T5Y3 1602 aa35.6■■■■□ 3.29
LINC00472-204ENST00000436803 LTBP4Q8N2S1 1624 aa35.6■■■■□ 3.29
LINC00472-204ENST00000436803 A2MP01023 1474 aa35.59■■■■□ 3.29
LINC00472-204ENST00000436803 ZMYM3Q14202 1370 aa35.58■■■■□ 3.29
LINC00472-204ENST00000436803 MTUS2Q5JR59 1369 aa35.58■■■■□ 3.29
LINC00472-204ENST00000436803 ADGBQ8N7X0 1667 aa35.58■■■■□ 3.29
LINC00472-204ENST00000436803 MYO3AQ8NEV4 1616 aa35.57■■■■□ 3.28
LINC00472-204ENST00000436803 ZNF142P52746 1687 aaPredicted RBP35.56■■■■□ 3.28
LINC00472-204ENST00000436803 EHBP1L1Q8N3D4 1523 aa35.53■■■■□ 3.28
LINC00472-204ENST00000436803 ZNF644Q9H582 1327 aaPredicted RBP35.48■■■■□ 3.27
LINC00472-204ENST00000436803 CEP170BQ9Y4F5 1589 aaPredicted RBP35.46■■■■□ 3.27
LINC00472-204ENST00000436803 PTPRKQ15262 1439 aa35.45■■■■□ 3.27
LINC00472-204ENST00000436803 MBD5Q9P267 1494 aa35.45■■■■□ 3.27
LINC00472-204ENST00000436803 GGT6Q6P531 493 aa35.44■■■■□ 3.26
LINC00472-204ENST00000436803 IQSEC2Q5JU85 1478 aa35.41■■■■□ 3.26
LINC00472-204ENST00000436803 CEP162Q5TB80 1403 aa35.4■■■■□ 3.26
LINC00472-204ENST00000436803 NCKAP5LQ9HCH0 1330 aa35.39■■■■□ 3.26
LINC00472-204ENST00000436803 PLA2R1Q13018 1463 aa35.37■■■■□ 3.25
LINC00472-204ENST00000436803 DISP3Q9P2K9 1392 aa35.36■■■■□ 3.25
LINC00472-204ENST00000436803 TCOF1Q13428 1488 aaKnown RBP35.34■■■■□ 3.25
LINC00472-204ENST00000436803 RTEL1-TNFRSF6BF6WH68 1400 aa35.33■■■■□ 3.25
LINC00472-204ENST00000436803 ZNF335Q9H4Z2 1342 aaPredicted RBP35.32■■■■□ 3.24
LINC00472-204ENST00000436803 SPATA31D1Q6ZQQ2 1576 aa35.3■■■■□ 3.24
LINC00472-204ENST00000436803 CAMSAP2Q08AD1 1489 aa35.29■■■■□ 3.24
LINC00472-204ENST00000436803 NCOA2Q15596 1464 aa35.29■■■■□ 3.24
LINC00472-204ENST00000436803 DNMT1P26358 1616 aaKnown RBP35.28■■■■□ 3.24
LINC00472-204ENST00000436803 CCDC141Q6ZP82 1450 aa35.28■■■■□ 3.24
LINC00472-204ENST00000436803 DHX29Q7Z478 1369 aaKnown RBP35.27■■■■□ 3.24
LINC00472-204ENST00000436803 ILDR2Q71H61 639 aa35.27■■■■□ 3.24
LINC00472-204ENST00000436803 PPP6R1Q9UPN7 881 aa35.27■■■■□ 3.24
LINC00472-204ENST00000436803 A2ML1A8K2U0 1454 aa35.25■■■■□ 3.23
LINC00472-204ENST00000436803 PKD2Q13563 968 aa35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms