RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
LSM3P3-201ENST00000436601 MAP3K1Q13233 1512 aa10.94□□□□□ -0.66
LSM3P3-201ENST00000436601 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
LSM3P3-201ENST00000436601 RAPGEF6Q8TEU7 1601 aa10.93□□□□□ -0.66
LSM3P3-201ENST00000436601 EPRSP07814 1512 aaKnown RBP10.93□□□□□ -0.66
LSM3P3-201ENST00000436601 DSG3P32926 999 aa10.92□□□□□ -0.66
LSM3P3-201ENST00000436601 UHRF1BP1LA0JNW5 1464 aa10.91□□□□□ -0.66
LSM3P3-201ENST00000436601 HECW1Q76N89 1606 aa10.91□□□□□ -0.66
LSM3P3-201ENST00000436601 TIAM1Q13009 1591 aa10.9□□□□□ -0.66
LSM3P3-201ENST00000436601 ATP10BO94823 1461 aa10.9□□□□□ -0.66
LSM3P3-201ENST00000436601 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
LSM3P3-201ENST00000436601 ABCC2Q92887 1545 aa10.89□□□□□ -0.67
LSM3P3-201ENST00000436601 CCDC18Q5T9S5 1454 aa10.89□□□□□ -0.67
LSM3P3-201ENST00000436601 LRRC9Q6ZRR7 1453 aa10.89□□□□□ -0.67
LSM3P3-201ENST00000436601 ECM2O94769 699 aaPredicted RBP10.89□□□□□ -0.67
LSM3P3-201ENST00000436601 VSIG10Q8N0Z9 540 aa10.89□□□□□ -0.67
LSM3P3-201ENST00000436601 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
LSM3P3-201ENST00000436601 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.89□□□□□ -0.67
LSM3P3-201ENST00000436601 CYB5RLQ6IPT4 315 aa10.87□□□□□ -0.67
LSM3P3-201ENST00000436601 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
LSM3P3-201ENST00000436601 RIMBP3CA6NJZ7 1639 aa10.87□□□□□ -0.67
LSM3P3-201ENST00000436601 RIMBP3BA6NNM3 1639 aa10.87□□□□□ -0.67
LSM3P3-201ENST00000436601 RIMBP3Q9UFD9 1639 aa10.87□□□□□ -0.67
LSM3P3-201ENST00000436601 MAGI3Q5TCQ9 1506 aa10.86□□□□□ -0.67
LSM3P3-201ENST00000436601 LRRIQ1Q96JM4 1722 aa10.86□□□□□ -0.67
LSM3P3-201ENST00000436601 KDM5BQ9UGL1 1544 aa10.85□□□□□ -0.67
LSM3P3-201ENST00000436601 BCANQ96GW7 911 aa10.85□□□□□ -0.67
LSM3P3-201ENST00000436601 CDK11AQ9UQ88 783 aaPredicted RBP10.85□□□□□ -0.67
LSM3P3-201ENST00000436601 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
LSM3P3-201ENST00000436601 CFAP43Q8NDM7 1665 aa10.85□□□□□ -0.67
LSM3P3-201ENST00000436601 ADCY10Q96PN6 1610 aa10.84□□□□□ -0.67
LSM3P3-201ENST00000436601 PLEKHD1A6NEE1 506 aa10.84□□□□□ -0.67
LSM3P3-201ENST00000436601 MIER1Q8N108 512 aa10.82□□□□□ -0.68
LSM3P3-201ENST00000436601 DNAJC5Q9H3Z4 198 aa10.82□□□□□ -0.68
LSM3P3-201ENST00000436601 TROQ12816 1431 aaPredicted RBP10.82□□□□□ -0.68
LSM3P3-201ENST00000436601 EHBP1L1Q8N3D4 1523 aa10.81□□□□□ -0.68
LSM3P3-201ENST00000436601 PHLDB1Q86UU1 1377 aa10.8□□□□□ -0.68
LSM3P3-201ENST00000436601 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
LSM3P3-201ENST00000436601 TRIM26Q12899 539 aaPredicted RBP10.8□□□□□ -0.68
LSM3P3-201ENST00000436601 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
LSM3P3-201ENST00000436601 PLEKHG5O94827 1062 aa10.79□□□□□ -0.68
LSM3P3-201ENST00000436601 POTEDQ86YR6 584 aa10.79□□□□□ -0.68
LSM3P3-201ENST00000436601 NCOA2Q15596 1464 aa10.79□□□□□ -0.68
LSM3P3-201ENST00000436601 ZCCHC11Q5TAX3 1644 aaKnown RBP10.78□□□□□ -0.68
LSM3P3-201ENST00000436601 ASXL2Q76L83 1435 aa10.76□□□□□ -0.69
LSM3P3-201ENST00000436601 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
LSM3P3-201ENST00000436601 RGL2O15211 777 aa10.75□□□□□ -0.69
LSM3P3-201ENST00000436601 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
LSM3P3-201ENST00000436601 WDR7Q9Y4E6 1490 aa10.74□□□□□ -0.69
LSM3P3-201ENST00000436601 CCNB3Q8WWL7 1395 aa10.74□□□□□ -0.69
LSM3P3-201ENST00000436601 MYOM3Q5VTT5 1437 aa10.74□□□□□ -0.69
LSM3P3-201ENST00000436601 RRBP1Q9P2E9 1410 aaKnown RBP10.74□□□□□ -0.69
LSM3P3-201ENST00000436601 KIF14Q15058 1648 aa10.73□□□□□ -0.69
LSM3P3-201ENST00000436601 PAXIP1Q6ZW49 1069 aaPredicted RBP10.73□□□□□ -0.69
LSM3P3-201ENST00000436601 PCGF6Q9BYE7 350 aa10.73□□□□□ -0.69
LSM3P3-201ENST00000436601 SUPT6HQ7KZ85 1726 aaKnown RBP10.72□□□□□ -0.69
LSM3P3-201ENST00000436601 GPATCH8Q9UKJ3 1502 aaKnown RBP10.72□□□□□ -0.69
LSM3P3-201ENST00000436601 FGD6Q6ZV73 1430 aa10.71□□□□□ -0.69
LSM3P3-201ENST00000436601 MAPKBP1O60336 1514 aa10.7□□□□□ -0.7
LSM3P3-201ENST00000436601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.7□□□□□ -0.7
LSM3P3-201ENST00000436601 MIA2Q96PC5 1412 aa10.7□□□□□ -0.7
LSM3P3-201ENST00000436601 CFAP44Q96MT7 982 aa10.7□□□□□ -0.7
LSM3P3-201ENST00000436601 ZNF644Q9H582 1327 aaPredicted RBP10.69□□□□□ -0.7
LSM3P3-201ENST00000436601 FAM50AQ14320 339 aaKnown RBP10.69□□□□□ -0.7
LSM3P3-201ENST00000436601 CFDP1Q9UEE9 299 aaPredicted RBP10.69□□□□□ -0.7
LSM3P3-201ENST00000436601 SPRYD3Q8NCJ5 442 aa10.68□□□□□ -0.7
LSM3P3-201ENST00000436601 CIZ1Q9ULV3 898 aaPredicted RBP10.68□□□□□ -0.7
LSM3P3-201ENST00000436601 PLCH2O75038 1416 aa10.67□□□□□ -0.7
LSM3P3-201ENST00000436601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.67□□□□□ -0.7
LSM3P3-201ENST00000436601 TTC37Q6PGP7 1564 aa10.67□□□□□ -0.7
LSM3P3-201ENST00000436601 TCOF1Q13428 1488 aaKnown RBP10.67□□□□□ -0.7
LSM3P3-201ENST00000436601 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
LSM3P3-201ENST00000436601 ZNF777Q9ULD5 760 aaPredicted RBP10.65□□□□□ -0.7
LSM3P3-201ENST00000436601 ITGAEP38570 1179 aa10.64□□□□□ -0.71
LSM3P3-201ENST00000436601 ABCA9Q8IUA7 1624 aa10.64□□□□□ -0.71
LSM3P3-201ENST00000436601 PTPN23Q9H3S7 1636 aa10.63□□□□□ -0.71
LSM3P3-201ENST00000436601 FAM69CQ0P6D2 419 aa10.63□□□□□ -0.71
LSM3P3-201ENST00000436601 EFCAB2Q5VUJ9 269 aa10.63□□□□□ -0.71
LSM3P3-201ENST00000436601 TAOK2Q9UL54 1235 aa10.63□□□□□ -0.71
LSM3P3-201ENST00000436601 CD109Q6YHK3 1445 aa10.63□□□□□ -0.71
LSM3P3-201ENST00000436601 PTPRKQ15262 1439 aa10.62□□□□□ -0.71
LSM3P3-201ENST00000436601 ARHGAP5Q13017 1502 aa10.62□□□□□ -0.71
LSM3P3-201ENST00000436601 CAMSAP2Q08AD1 1489 aa10.61□□□□□ -0.71
LSM3P3-201ENST00000436601 GLI2P10070 1586 aa10.61□□□□□ -0.71
LSM3P3-201ENST00000436601 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
LSM3P3-201ENST00000436601 HNRNPMP52272 730 aaKnown RBP eCLIP10.61□□□□□ -0.71
LSM3P3-201ENST00000436601 ARAP3Q8WWN8 1544 aa10.61□□□□□ -0.71
LSM3P3-201ENST00000436601 PREX2Q70Z35 1606 aa10.61□□□□□ -0.71
LSM3P3-201ENST00000436601 CDC42BPAQ5VT25 1732 aa10.61□□□□□ -0.71
LSM3P3-201ENST00000436601 ITSN2Q9NZM3 1697 aa10.6□□□□□ -0.71
LSM3P3-201ENST00000436601 ABCC5O15440 1437 aa10.6□□□□□ -0.71
LSM3P3-201ENST00000436601 MBD5Q9P267 1494 aa10.6□□□□□ -0.71
LSM3P3-201ENST00000436601 GSE1Q14687 1217 aa10.59□□□□□ -0.71
LSM3P3-201ENST00000436601 FANCAO15360 1455 aa10.59□□□□□ -0.71
LSM3P3-201ENST00000436601 SAMD9LQ8IVG5 1584 aa10.59□□□□□ -0.71
LSM3P3-201ENST00000436601 DIP2BQ9P265 1576 aa10.59□□□□□ -0.71
LSM3P3-201ENST00000436601 DAPK1P53355 1430 aa10.58□□□□□ -0.72
LSM3P3-201ENST00000436601 KIAA1107Q9UPP5 1409 aa10.58□□□□□ -0.72
LSM3P3-201ENST00000436601 ARHGEF12Q9NZN5 1544 aa10.58□□□□□ -0.72
LSM3P3-201ENST00000436601 CDC42BPBQ9Y5S2 1711 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms