RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 L3MBTL3Q96JM7 780 aaPredicted RBP9.77□□□□□ -0.85
HMGB1P45-201ENST00000435986 NLRP6P59044 892 aa9.76□□□□□ -0.85
HMGB1P45-201ENST00000435986 LCE2DQ5TA82 110 aaPredicted RBP9.76□□□□□ -0.85
HMGB1P45-201ENST00000435986 TMEM121BQ9BXQ6 578 aaPredicted RBP9.74□□□□□ -0.85
HMGB1P45-201ENST00000435986 BOLA1Q9Y3E2 137 aa9.74□□□□□ -0.85
HMGB1P45-201ENST00000435986 SLAIN1Q8ND83 568 aa9.73□□□□□ -0.85
HMGB1P45-201ENST00000435986 FAM163AQ96GL9 167 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P45-201ENST00000435986 MICALL2Q8IY33 904 aa9.7□□□□□ -0.86
HMGB1P45-201ENST00000435986 TULP1O00294 542 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P45-201ENST00000435986 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.69□□□□□ -0.86
HMGB1P45-201ENST00000435986 C3orf67Q6ZVT6 689 aa9.68□□□□□ -0.86
HMGB1P45-201ENST00000435986 G3V3G9 751 aa9.65□□□□□ -0.86
HMGB1P45-201ENST00000435986 PPP1R37O75864 691 aa9.65□□□□□ -0.86
HMGB1P45-201ENST00000435986 POTEMA6NI47 508 aa9.63□□□□□ -0.87
HMGB1P45-201ENST00000435986 TMEM92Q6UXU6 159 aa9.63□□□□□ -0.87
HMGB1P45-201ENST00000435986 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
HMGB1P45-201ENST00000435986 ST18O60284 1047 aa9.59□□□□□ -0.87
HMGB1P45-201ENST00000435986 CADPS2Q86UW7 1296 aa9.59□□□□□ -0.87
HMGB1P45-201ENST00000435986 ARHGEF1Q92888 912 aaKnown RBP9.58□□□□□ -0.88
HMGB1P45-201ENST00000435986 PDE4AP27815 886 aa9.57□□□□□ -0.88
HMGB1P45-201ENST00000435986 E2F4Q16254 413 aa9.57□□□□□ -0.88
HMGB1P45-201ENST00000435986 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
HMGB1P45-201ENST00000435986 KIF3CO14782 793 aa9.54□□□□□ -0.88
HMGB1P45-201ENST00000435986 HOXB3P14651 431 aaPredicted RBP9.51□□□□□ -0.89
HMGB1P45-201ENST00000435986 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
HMGB1P45-201ENST00000435986 SNPHO15079 494 aa9.5□□□□□ -0.89
HMGB1P45-201ENST00000435986 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
HMGB1P45-201ENST00000435986 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
HMGB1P45-201ENST00000435986 C2orf72A6NCS6 295 aa9.49□□□□□ -0.89
HMGB1P45-201ENST00000435986 LMOD2Q6P5Q4 547 aa9.48□□□□□ -0.89
HMGB1P45-201ENST00000435986 DDX27Q96GQ7 796 aaKnown RBP9.48□□□□□ -0.89
HMGB1P45-201ENST00000435986 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.46□□□□□ -0.9
HMGB1P45-201ENST00000435986 TMC2Q8TDI7 906 aa9.44□□□□□ -0.9
HMGB1P45-201ENST00000435986 POTEB3A0JP26 581 aa9.43□□□□□ -0.9
HMGB1P45-201ENST00000435986 MFSD10Q14728 455 aa9.43□□□□□ -0.9
HMGB1P45-201ENST00000435986 POTEBQ6S5H4 581 aa9.43□□□□□ -0.9
HMGB1P45-201ENST00000435986 CRISPLD2Q9H0B8 497 aa9.43□□□□□ -0.9
HMGB1P45-201ENST00000435986 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P45-201ENST00000435986 NCKAP5LQ9HCH0 1330 aa9.42□□□□□ -0.9
HMGB1P45-201ENST00000435986 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
HMGB1P45-201ENST00000435986 FOXK1P85037 733 aa9.4□□□□□ -0.9
HMGB1P45-201ENST00000435986 DSG2Q14126 1118 aa9.39□□□□□ -0.91
HMGB1P45-201ENST00000435986 CDAN1Q8IWY9 1227 aa9.39□□□□□ -0.91
HMGB1P45-201ENST00000435986 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
HMGB1P45-201ENST00000435986 ARIH1Q9Y4X5 557 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P45-201ENST00000435986 TESPA1A2RU30 521 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P45-201ENST00000435986 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P45-201ENST00000435986 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
HMGB1P45-201ENST00000435986 SEMA3EO15041 775 aa9.36□□□□□ -0.91
HMGB1P45-201ENST00000435986 SLC34A2O95436 690 aa9.36□□□□□ -0.91
HMGB1P45-201ENST00000435986 GPR153Q6NV75 609 aa9.36□□□□□ -0.91
HMGB1P45-201ENST00000435986 ZNF710Q8N1W2 664 aa9.36□□□□□ -0.91
HMGB1P45-201ENST00000435986 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
HMGB1P45-201ENST00000435986 EMP3P54852 163 aa9.35□□□□□ -0.91
HMGB1P45-201ENST00000435986 CAMK2BQ13554 666 aa9.35□□□□□ -0.91
HMGB1P45-201ENST00000435986 PPP1R15BQ5SWA1 713 aa9.35□□□□□ -0.91
HMGB1P45-201ENST00000435986 PLPP6Q8IY26 295 aa9.35□□□□□ -0.91
HMGB1P45-201ENST00000435986 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
HMGB1P45-201ENST00000435986 ERICH6Q7L0X2 663 aa9.34□□□□□ -0.91
HMGB1P45-201ENST00000435986 KHSRPQ92945 711 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGB1P45-201ENST00000435986 TMEM132AQ24JP5 1023 aa9.32□□□□□ -0.92
HMGB1P45-201ENST00000435986 SPDYE16A6NNV3 312 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P45-201ENST00000435986 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
HMGB1P45-201ENST00000435986 ZC3H15Q8WU90 426 aaKnown RBP9.31□□□□□ -0.92
HMGB1P45-201ENST00000435986 HS3ST6Q96QI5 342 aa9.31□□□□□ -0.92
HMGB1P45-201ENST00000435986 PTCD2Q8WV60 388 aaKnown RBP9.3□□□□□ -0.92
HMGB1P45-201ENST00000435986 PCDH10Q9P2E7 1040 aa9.3□□□□□ -0.92
HMGB1P45-201ENST00000435986 PCDHGA4Q9Y5G9 962 aa9.3□□□□□ -0.92
HMGB1P45-201ENST00000435986 KDM4FA0A1W2PPD8 638 aa9.26□□□□□ -0.93
HMGB1P45-201ENST00000435986 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
HMGB1P45-201ENST00000435986 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
HMGB1P45-201ENST00000435986 DAXXQ9UER7 740 aaPredicted RBP9.26□□□□□ -0.93
HMGB1P45-201ENST00000435986 OXER1Q8TDS5 423 aa9.25□□□□□ -0.93
HMGB1P45-201ENST00000435986 NUDT7P0C024 238 aa9.24□□□□□ -0.93
HMGB1P45-201ENST00000435986 VARS2Q5ST30 1063 aaKnown RBP9.23□□□□□ -0.93
HMGB1P45-201ENST00000435986 GPIHBP1Q8IV16 184 aa9.23□□□□□ -0.93
HMGB1P45-201ENST00000435986 GTF3C3Q9Y5Q9 886 aa9.23□□□□□ -0.93
HMGB1P45-201ENST00000435986 ERBB3P21860 1342 aa9.23□□□□□ -0.93
HMGB1P45-201ENST00000435986 EMILIN3Q9NT22 766 aa9.22□□□□□ -0.93
HMGB1P45-201ENST00000435986 ZNF316A6NFI3 1004 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P45-201ENST00000435986 DPYSL4O14531 572 aa9.21□□□□□ -0.94
HMGB1P45-201ENST00000435986 ZMYND10O75800 440 aa9.21□□□□□ -0.94
HMGB1P45-201ENST00000435986 MAP3K9P80192 1104 aa9.21□□□□□ -0.94
HMGB1P45-201ENST00000435986 KRI1Q8N9T8 703 aaKnown RBP9.21□□□□□ -0.94
HMGB1P45-201ENST00000435986 UPF1Q92900 1129 aaKnown RBP eCLIP9.21□□□□□ -0.94
HMGB1P45-201ENST00000435986 PDIA6Q15084 440 aa9.2□□□□□ -0.94
HMGB1P45-201ENST00000435986 NEUROD2Q15784 382 aa9.2□□□□□ -0.94
HMGB1P45-201ENST00000435986 SLC24A3Q9HC58 644 aa9.2□□□□□ -0.94
HMGB1P45-201ENST00000435986 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
HMGB1P45-201ENST00000435986 BARGINQ6ZT62 677 aa9.18□□□□□ -0.94
HMGB1P45-201ENST00000435986 TBC1D12O60347 775 aa9.17□□□□□ -0.94
HMGB1P45-201ENST00000435986 SPNS2Q8IVW8 549 aa9.17□□□□□ -0.94
HMGB1P45-201ENST00000435986 AK7Q96M32 723 aa9.17□□□□□ -0.94
HMGB1P45-201ENST00000435986 MLLT3P42568 568 aaPredicted RBP9.16□□□□□ -0.94
HMGB1P45-201ENST00000435986 BRPF1P55201 1214 aaPredicted RBP9.16□□□□□ -0.94
HMGB1P45-201ENST00000435986 RBM26Q5T8P6 1007 aaKnown RBP9.15□□□□□ -0.94
HMGB1P45-201ENST00000435986 ZNF687Q8N1G0 1237 aa9.14□□□□□ -0.95
HMGB1P45-201ENST00000435986 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P45-201ENST00000435986 EVI5O60447 810 aa9.12□□□□□ -0.95
HMGB1P45-201ENST00000435986 POTEEQ6S8J3 1075 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms