RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 ARHGAP35Q9NRY4 1499 aa28.51■■■□□ 2.15
TOP2B-204ENST00000435706 AMER1Q5JTC6 1135 aaPredicted RBP28.51■■■□□ 2.15
TOP2B-204ENST00000435706 KIAA2012Q0VF49 1180 aa28.5■■■□□ 2.15
TOP2B-204ENST00000435706 ZBTB7CA1YPR0 619 aa28.49■■■□□ 2.15
TOP2B-204ENST00000435706 MCCP23508 829 aa28.49■■■□□ 2.15
TOP2B-204ENST00000435706 DRC7Q8IY82 874 aa28.49■■■□□ 2.15
TOP2B-204ENST00000435706 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
TOP2B-204ENST00000435706 RWDD1Q9H446 243 aaPredicted RBP28.49■■■□□ 2.15
TOP2B-204ENST00000435706 GSE1Q14687 1217 aa28.46■■■□□ 2.15
TOP2B-204ENST00000435706 KCNJ4P48050 445 aa28.46■■■□□ 2.15
TOP2B-204ENST00000435706 HSP90AA2PQ14568 343 aaPredicted RBP28.45■■■□□ 2.15
TOP2B-204ENST00000435706 C14orf37Q86TY3 774 aa28.44■■■□□ 2.14
TOP2B-204ENST00000435706 FGD1P98174 961 aa28.44■■■□□ 2.14
TOP2B-204ENST00000435706 FOXD1Q16676 465 aa28.43■■■□□ 2.14
TOP2B-204ENST00000435706 OS9Q13438 667 aaPredicted RBP28.42■■■□□ 2.14
TOP2B-204ENST00000435706 PDE4AP27815 886 aa28.4■■■□□ 2.14
TOP2B-204ENST00000435706 MORC1Q86VD1 984 aa28.4■■■□□ 2.14
TOP2B-204ENST00000435706 PMFBP1Q8TBY8 1022 aa28.4■■■□□ 2.14
TOP2B-204ENST00000435706 MFAP1P55081 439 aaKnown RBP28.4■■■□□ 2.14
TOP2B-204ENST00000435706 PDE3BQ13370 1112 aa28.39■■■□□ 2.13
TOP2B-204ENST00000435706 BAZ1AQ9NRL2 1556 aaPredicted RBP28.38■■■□□ 2.13
TOP2B-204ENST00000435706 DHX57Q6P158 1386 aaKnown RBP28.37■■■□□ 2.13
TOP2B-204ENST00000435706 IPO8O15397 1037 aaKnown RBP28.36■■■□□ 2.13
TOP2B-204ENST00000435706 CARMIL1Q5VZK9 1371 aa28.36■■■□□ 2.13
TOP2B-204ENST00000435706 CECR2Q9BXF3 1484 aa28.36■■■□□ 2.13
TOP2B-204ENST00000435706 MPHOSPH9Q99550 1183 aa28.35■■■□□ 2.13
TOP2B-204ENST00000435706 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
TOP2B-204ENST00000435706 PKD2Q13563 968 aa28.34■■■□□ 2.13
TOP2B-204ENST00000435706 POGKQ9P215 609 aa28.34■■■□□ 2.13
TOP2B-204ENST00000435706 SYAP1Q96A49 352 aaPredicted RBP28.33■■■□□ 2.13
TOP2B-204ENST00000435706 ABCC8Q09428 1581 aa28.33■■■□□ 2.13
TOP2B-204ENST00000435706 TAOK2Q9UL54 1235 aa28.33■■■□□ 2.13
TOP2B-204ENST00000435706 PLEKHG5O94827 1062 aa28.33■■■□□ 2.12
TOP2B-204ENST00000435706 ITPRIPQ8IWB1 547 aa28.32■■■□□ 2.12
TOP2B-204ENST00000435706 NAP1L2Q9ULW6 460 aaPredicted RBP28.32■■■□□ 2.12
TOP2B-204ENST00000435706 VSIG10Q8N0Z9 540 aa28.31■■■□□ 2.12
TOP2B-204ENST00000435706 SLC4A3P48751 1232 aa28.3■■■□□ 2.12
TOP2B-204ENST00000435706 GOLGA2Q08379 1002 aa28.3■■■□□ 2.12
TOP2B-204ENST00000435706 CALD1Q05682 793 aaKnown RBP28.29■■■□□ 2.12
TOP2B-204ENST00000435706 ROCK2O75116 1388 aaKnown RBP28.27■■■□□ 2.12
TOP2B-204ENST00000435706 NLRP13Q86W25 1043 aa28.27■■■□□ 2.12
TOP2B-204ENST00000435706 FAM161AQ3B820 660 aa28.26■■■□□ 2.12
TOP2B-204ENST00000435706 ZBED9Q6R2W3 1325 aa28.26■■■□□ 2.11
TOP2B-204ENST00000435706 L3MBTL2Q969R5 705 aa28.26■■■□□ 2.11
TOP2B-204ENST00000435706 APBB1O00213 710 aa28.25■■■□□ 2.11
TOP2B-204ENST00000435706 FMN1Q68DA7 1419 aa28.24■■■□□ 2.11
TOP2B-204ENST00000435706 DDX11L8A8MPP1 907 aa28.24■■■□□ 2.11
TOP2B-204ENST00000435706 CUX2O14529 1486 aa28.24■■■□□ 2.11
TOP2B-204ENST00000435706 CENPQQ7L2Z9 268 aaPredicted RBP28.23■■■□□ 2.11
TOP2B-204ENST00000435706 EXOC6Q8TAG9 804 aa28.22■■■□□ 2.11
TOP2B-204ENST00000435706 HAP1P54257 671 aaPredicted RBP28.21■■■□□ 2.11
TOP2B-204ENST00000435706 NACADO15069 1562 aa28.2■■■□□ 2.11
TOP2B-204ENST00000435706 RRP1P56182 461 aaKnown RBP28.2■■■□□ 2.1
TOP2B-204ENST00000435706 FOXD4L1Q9NU39 408 aa28.19■■■□□ 2.1
TOP2B-204ENST00000435706 A0A0G2JS52 829 aa28.18■■■□□ 2.1
TOP2B-204ENST00000435706 PRKRIP1Q9H875 184 aaPredicted RBP28.17■■■□□ 2.1
TOP2B-204ENST00000435706 CENPJQ9HC77 1338 aaPredicted RBP28.17■■■□□ 2.1
TOP2B-204ENST00000435706 U2AF1L5P0DN76 240 aaPredicted RBP28.16■■■□□ 2.1
TOP2B-204ENST00000435706 U2AF1Q01081 240 aaKnown RBP eCLIP28.16■■■□□ 2.1
TOP2B-204ENST00000435706 KIAA1211Q6ZU35 1233 aa28.16■■■□□ 2.1
TOP2B-204ENST00000435706 TNNT3P45378 269 aaPredicted RBP28.15■■■□□ 2.1
TOP2B-204ENST00000435706 CLUAP1Q96AJ1 413 aa28.14■■■□□ 2.1
TOP2B-204ENST00000435706 SMC4Q9NTJ3 1288 aa28.13■■■□□ 2.09
TOP2B-204ENST00000435706 MYBBP1AQ9BQG0 1328 aaKnown RBP28.13■■■□□ 2.09
TOP2B-204ENST00000435706 KIF15Q9NS87 1388 aa28.13■■■□□ 2.09
TOP2B-204ENST00000435706 PHLDB1Q86UU1 1377 aa28.12■■■□□ 2.09
TOP2B-204ENST00000435706 SRPK2P78362 688 aaKnown RBP28.12■■■□□ 2.09
TOP2B-204ENST00000435706 PLIN1O60240 522 aa28.11■■■□□ 2.09
TOP2B-204ENST00000435706 CCDC146Q8IYE0 955 aa28.11■■■□□ 2.09
TOP2B-204ENST00000435706 EIF4G1Q04637 1599 aaKnown RBP28.09■■■□□ 2.09
TOP2B-204ENST00000435706 CRBNQ96SW2 442 aa28.08■■■□□ 2.09
TOP2B-204ENST00000435706 HTATSF1O43719 755 aaKnown RBP28.07■■■□□ 2.08
TOP2B-204ENST00000435706 SKOR2Q2VWA4 1001 aaPredicted RBP28.06■■■□□ 2.08
TOP2B-204ENST00000435706 KANK1Q14678 1352 aa28.06■■■□□ 2.08
TOP2B-204ENST00000435706 NUP155O75694 1391 aa28.05■■■□□ 2.08
TOP2B-204ENST00000435706 MROH2BQ7Z745 1585 aa28.05■■■□□ 2.08
TOP2B-204ENST00000435706 PHF14O94880 888 aa28.05■■■□□ 2.08
TOP2B-204ENST00000435706 DDX49Q9Y6V7 483 aaKnown RBP28.04■■■□□ 2.08
TOP2B-204ENST00000435706 ST18O60284 1047 aa28■■■□□ 2.07
TOP2B-204ENST00000435706 SAFB2Q14151 953 aaKnown RBP eCLIP28■■■□□ 2.07
TOP2B-204ENST00000435706 CSPP1Q1MSJ5 1256 aa28■■■□□ 2.07
TOP2B-204ENST00000435706 TULP1O00294 542 aaPredicted RBP27.99■■■□□ 2.07
TOP2B-204ENST00000435706 RTF1Q92541 710 aaKnown RBP27.99■■■□□ 2.07
TOP2B-204ENST00000435706 GNL2Q13823 731 aaKnown RBP27.97■■■□□ 2.07
TOP2B-204ENST00000435706 NOL8Q76FK4 1167 aaKnown RBP27.96■■■□□ 2.07
TOP2B-204ENST00000435706 TPM4P67936 248 aa27.95■■■□□ 2.06
TOP2B-204ENST00000435706 ANKRD30AQ9BXX3 1397 aa27.95■■■□□ 2.06
TOP2B-204ENST00000435706 NFKBIBQ15653 356 aa27.95■■■□□ 2.06
TOP2B-204ENST00000435706 HDGFL2Q7Z4V5 671 aaPredicted RBP27.94■■■□□ 2.06
TOP2B-204ENST00000435706 FOXD4L5Q5VV16 416 aaPredicted RBP27.93■■■□□ 2.06
TOP2B-204ENST00000435706 FOXD4L4Q8WXT5 416 aaPredicted RBP27.93■■■□□ 2.06
TOP2B-204ENST00000435706 TRIM6-TRIM34B2RNG4 842 aa27.93■■■□□ 2.06
TOP2B-204ENST00000435706 EIF3AQ14152 1382 aaKnown RBP27.92■■■□□ 2.06
TOP2B-204ENST00000435706 HMMRO75330 724 aa27.92■■■□□ 2.06
TOP2B-204ENST00000435706 SOX12O15370 315 aa27.91■■■□□ 2.06
TOP2B-204ENST00000435706 CGNL1Q0VF96 1302 aa27.91■■■□□ 2.06
TOP2B-204ENST00000435706 ST20-MTHFSA0A0A6YYL1 179 aa27.89■■■□□ 2.06
TOP2B-204ENST00000435706 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.05
TOP2B-204ENST00000435706 CHMP5Q9NZZ3 219 aa27.88■■■□□ 2.05
TOP2B-204ENST00000435706 FAM13BQ9NYF5 915 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms