RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
CTDSPL-204ENST00000435525 MYOM3Q5VTT5 1437 aa25.42■■□□□ 1.66
CTDSPL-204ENST00000435525 CFAP74Q9C0B2 1584 aa25.41■■□□□ 1.66
CTDSPL-204ENST00000435525 ITSN2Q9NZM3 1697 aa25.39■■□□□ 1.66
CTDSPL-204ENST00000435525 TSPOAP1O95153 1857 aa25.38■■□□□ 1.65
CTDSPL-204ENST00000435525 MIA2Q96PC5 1412 aa25.38■■□□□ 1.65
CTDSPL-204ENST00000435525 PREX2Q70Z35 1606 aa25.38■■□□□ 1.65
CTDSPL-204ENST00000435525 AKNAQ7Z591 1439 aa25.37■■□□□ 1.65
CTDSPL-204ENST00000435525 PLEKHH2Q8IVE3 1493 aa25.36■■□□□ 1.65
CTDSPL-204ENST00000435525 CDC42BPAQ5VT25 1732 aa25.32■■□□□ 1.64
CTDSPL-204ENST00000435525 ADGRL1O94910 1474 aa25.32■■□□□ 1.64
CTDSPL-204ENST00000435525 PPRC1Q5VV67 1664 aaKnown RBP25.32■■□□□ 1.64
CTDSPL-204ENST00000435525 FGD6Q6ZV73 1430 aa25.3■■□□□ 1.64
CTDSPL-204ENST00000435525 SCAPERQ9BY12 1400 aa25.29■■□□□ 1.64
CTDSPL-204ENST00000435525 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
CTDSPL-204ENST00000435525 KIAA1107Q9UPP5 1409 aa25.29■■□□□ 1.64
CTDSPL-204ENST00000435525 DENND4BO75064 1496 aaPredicted RBP25.28■■□□□ 1.64
CTDSPL-204ENST00000435525 RSPH4AQ5TD94 716 aa25.28■■□□□ 1.64
CTDSPL-204ENST00000435525 FAM50AQ14320 339 aaKnown RBP25.25■■□□□ 1.63
CTDSPL-204ENST00000435525 CAMSAP2Q08AD1 1489 aa25.24■■□□□ 1.63
CTDSPL-204ENST00000435525 ZNF644Q9H582 1327 aaPredicted RBP25.24■■□□□ 1.63
CTDSPL-204ENST00000435525 HNRNPMP52272 730 aaKnown RBP eCLIP25.23■■□□□ 1.637e-7■■■■□ 19.6
CTDSPL-204ENST00000435525 KDM6BO15054 1643 aa25.23■■□□□ 1.63
CTDSPL-204ENST00000435525 SAMD9LQ8IVG5 1584 aa25.22■■□□□ 1.63
CTDSPL-204ENST00000435525 ABCC1P33527 1531 aa25.22■■□□□ 1.63
CTDSPL-204ENST00000435525 RAPGEF3O95398 923 aa25.2■■□□□ 1.62
CTDSPL-204ENST00000435525 MYT1LQ9UL68 1186 aa25.2■■□□□ 1.62
CTDSPL-204ENST00000435525 ZNF518AQ6AHZ1 1483 aa25.2■■□□□ 1.62
CTDSPL-204ENST00000435525 POGZQ7Z3K3 1410 aa25.2■■□□□ 1.62
CTDSPL-204ENST00000435525 PTPN23Q9H3S7 1636 aa25.19■■□□□ 1.62
CTDSPL-204ENST00000435525 TSPY4P0CV99 314 aa25.19■■□□□ 1.62
CTDSPL-204ENST00000435525 TSPY10P0CW01 314 aa25.19■■□□□ 1.62
CTDSPL-204ENST00000435525 TCOF1Q13428 1488 aaKnown RBP25.19■■□□□ 1.62
CTDSPL-204ENST00000435525 SYCP2Q9BX26 1530 aa25.17■■□□□ 1.62
CTDSPL-204ENST00000435525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.16■■□□□ 1.62
CTDSPL-204ENST00000435525 AFAP1Q8N556 730 aa25.15■■□□□ 1.62
CTDSPL-204ENST00000435525 RRBP1Q9P2E9 1410 aaKnown RBP25.14■■□□□ 1.62
CTDSPL-204ENST00000435525 CCDC141Q6ZP82 1450 aa25.14■■□□□ 1.61
CTDSPL-204ENST00000435525 COL17A1Q9UMD9 1497 aaPredicted RBP25.14■■□□□ 1.61
CTDSPL-204ENST00000435525 SPAG9O60271 1321 aaKnown RBP25.13■■□□□ 1.61
CTDSPL-204ENST00000435525 TRAPPC8Q9Y2L5 1435 aa25.13■■□□□ 1.61
CTDSPL-204ENST00000435525 MBD5Q9P267 1494 aa25.13■■□□□ 1.61
CTDSPL-204ENST00000435525 ARHGEF12Q9NZN5 1544 aa25.12■■□□□ 1.61
CTDSPL-204ENST00000435525 ARHGEF5Q12774 1597 aa25.1■■□□□ 1.61
CTDSPL-204ENST00000435525 MAGI2Q86UL8 1455 aa25.09■■□□□ 1.61
CTDSPL-204ENST00000435525 DAPK1P53355 1430 aa25.05■■□□□ 1.6
CTDSPL-204ENST00000435525 ZMYM4Q5VZL5 1548 aa25.05■■□□□ 1.6
CTDSPL-204ENST00000435525 MLH3Q9UHC1 1453 aa25.04■■□□□ 1.6
CTDSPL-204ENST00000435525 KDM5CP41229 1560 aa25.04■■□□□ 1.6
CTDSPL-204ENST00000435525 RTEL1-TNFRSF6BF6WH68 1400 aa25.03■■□□□ 1.6
CTDSPL-204ENST00000435525 RICTORQ6R327 1708 aa25.03■■□□□ 1.6
CTDSPL-204ENST00000435525 ITGAEP38570 1179 aa25.03■■□□□ 1.6
CTDSPL-204ENST00000435525 ABCC5O15440 1437 aa25.03■■□□□ 1.6
CTDSPL-204ENST00000435525 FRMPD1Q5SYB0 1578 aa25.02■■□□□ 1.6
CTDSPL-204ENST00000435525 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
CTDSPL-204ENST00000435525 C9orf84Q5VXU9 1444 aa25.01■■□□□ 1.59
CTDSPL-204ENST00000435525 ZFYVE16Q7Z3T8 1539 aa25■■□□□ 1.59
CTDSPL-204ENST00000435525 HECW2Q9P2P5 1572 aa25■■□□□ 1.59
CTDSPL-204ENST00000435525 DNMT1P26358 1616 aaKnown RBP25■■□□□ 1.59
CTDSPL-204ENST00000435525 ANKRD30AQ9BXX3 1397 aa24.98■■□□□ 1.59
CTDSPL-204ENST00000435525 ATP7AQ04656 1500 aa24.97■■□□□ 1.59
CTDSPL-204ENST00000435525 CHIC2Q9UKJ5 165 aa24.97■■□□□ 1.59
CTDSPL-204ENST00000435525 MAST1Q9Y2H9 1570 aa24.93■■□□□ 1.58
CTDSPL-204ENST00000435525 ATP10AO60312 1499 aa24.93■■□□□ 1.58
CTDSPL-204ENST00000435525 YEATS2Q9ULM3 1422 aa24.93■■□□□ 1.58
CTDSPL-204ENST00000435525 INO80Q9ULG1 1556 aaPredicted RBP24.92■■□□□ 1.58
CTDSPL-204ENST00000435525 ARHGEF40Q8TER5 1519 aa24.91■■□□□ 1.58
CTDSPL-204ENST00000435525 ROCK1Q13464 1354 aa24.9■■□□□ 1.58
CTDSPL-204ENST00000435525 TRIM26Q12899 539 aaPredicted RBP24.89■■□□□ 1.58
CTDSPL-204ENST00000435525 RRP7BPQ9NSQ0 103 aa24.89■■□□□ 1.58
CTDSPL-204ENST00000435525 ARID4BQ4LE39 1312 aaPredicted RBP24.88■■□□□ 1.57
CTDSPL-204ENST00000435525 KIF15Q9NS87 1388 aa24.88■■□□□ 1.57
CTDSPL-204ENST00000435525 CROCC2H7BZ55 1655 aa24.88■■□□□ 1.57
CTDSPL-204ENST00000435525 ADGRL2O95490 1459 aa24.87■■□□□ 1.57
CTDSPL-204ENST00000435525 NCOA1Q15788 1441 aa24.86■■□□□ 1.57
CTDSPL-204ENST00000435525 KIDINS220Q9ULH0 1771 aa24.86■■□□□ 1.57
CTDSPL-204ENST00000435525 A2MP01023 1474 aa24.85■■□□□ 1.57
CTDSPL-204ENST00000435525 DHX29Q7Z478 1369 aaKnown RBP24.85■■□□□ 1.57
CTDSPL-204ENST00000435525 PTPRKQ15262 1439 aa24.85■■□□□ 1.57
CTDSPL-204ENST00000435525 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
CTDSPL-204ENST00000435525 PLXNC1O60486 1568 aa24.84■■□□□ 1.57
CTDSPL-204ENST00000435525 ABCA6Q8N139 1617 aa24.82■■□□□ 1.56
CTDSPL-204ENST00000435525 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
CTDSPL-204ENST00000435525 ADGBQ8N7X0 1667 aa24.8■■□□□ 1.56
CTDSPL-204ENST00000435525 REREQ9P2R6 1566 aa24.8■■□□□ 1.56
CTDSPL-204ENST00000435525 ERBINQ96RT1 1412 aa24.78■■□□□ 1.56
CTDSPL-204ENST00000435525 KIF3BO15066 747 aa24.76■■□□□ 1.55
CTDSPL-204ENST00000435525 ANKRD50Q9ULJ7 1429 aa24.76■■□□□ 1.55
CTDSPL-204ENST00000435525 AGLP35573 1532 aa24.76■■□□□ 1.55
CTDSPL-204ENST00000435525 HFM1A2PYH4 1435 aa24.73■■□□□ 1.55
CTDSPL-204ENST00000435525 ACIN1Q9UKV3 1341 aaKnown RBP24.73■■□□□ 1.55
CTDSPL-204ENST00000435525 ESF1Q9H501 851 aaKnown RBP24.73■■□□□ 1.55
CTDSPL-204ENST00000435525 MLECQ14165 292 aa24.71■■□□□ 1.55
CTDSPL-204ENST00000435525 GGT6Q6P531 493 aa24.7■■□□□ 1.54
CTDSPL-204ENST00000435525 PPP6R1Q9UPN7 881 aa24.7■■□□□ 1.54
CTDSPL-204ENST00000435525 NAIPQ13075 1403 aa24.69■■□□□ 1.54
CTDSPL-204ENST00000435525 KANK1Q14678 1352 aa24.67■■□□□ 1.54
CTDSPL-204ENST00000435525 EIF2AK4Q9P2K8 1649 aaKnown RBP24.66■■□□□ 1.54
CTDSPL-204ENST00000435525 SETD5Q9C0A6 1442 aa24.65■■□□□ 1.54
CTDSPL-204ENST00000435525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms