RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 PREX2Q70Z35 1606 aa17.33■□□□□ 0.37
PCOTH-203ENST00000435039 TTC37Q6PGP7 1564 aa17.33■□□□□ 0.37
PCOTH-203ENST00000435039 TCOF1Q13428 1488 aaKnown RBP17.32■□□□□ 0.36
PCOTH-203ENST00000435039 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
PCOTH-203ENST00000435039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCOTH-203ENST00000435039 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
PCOTH-203ENST00000435039 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
PCOTH-203ENST00000435039 ABCA9Q8IUA7 1624 aa17.28■□□□□ 0.36
PCOTH-203ENST00000435039 TEX14Q8IWB6 1497 aa17.27■□□□□ 0.36
PCOTH-203ENST00000435039 ARAP3Q8WWN8 1544 aa17.26■□□□□ 0.35
PCOTH-203ENST00000435039 CDC42BPBQ9Y5S2 1711 aa17.25■□□□□ 0.35
PCOTH-203ENST00000435039 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
PCOTH-203ENST00000435039 CAMSAP2Q08AD1 1489 aa17.23■□□□□ 0.35
PCOTH-203ENST00000435039 DNMT1P26358 1616 aaKnown RBP17.21■□□□□ 0.35
PCOTH-203ENST00000435039 CROCC2H7BZ55 1655 aa17.2■□□□□ 0.34
PCOTH-203ENST00000435039 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
PCOTH-203ENST00000435039 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
PCOTH-203ENST00000435039 ARHGEF5Q12774 1597 aa17.16■□□□□ 0.34
PCOTH-203ENST00000435039 CFAP74Q9C0B2 1584 aa17.16■□□□□ 0.34
PCOTH-203ENST00000435039 PLCH2O75038 1416 aa17.16■□□□□ 0.34
PCOTH-203ENST00000435039 FAM50AQ14320 339 aaKnown RBP17.16■□□□□ 0.34
PCOTH-203ENST00000435039 CD109Q6YHK3 1445 aa17.15■□□□□ 0.34
PCOTH-203ENST00000435039 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
PCOTH-203ENST00000435039 PLEKHH2Q8IVE3 1493 aa17.15■□□□□ 0.34
PCOTH-203ENST00000435039 ADGBQ8N7X0 1667 aa17.14■□□□□ 0.33
PCOTH-203ENST00000435039 ABCC1P33527 1531 aa17.14■□□□□ 0.33
PCOTH-203ENST00000435039 AKNAQ7Z591 1439 aa17.13■□□□□ 0.33
PCOTH-203ENST00000435039 SHANK2Q9UPX8 1470 aa17.13■□□□□ 0.33
PCOTH-203ENST00000435039 KCNH8Q96L42 1107 aa17.13■□□□□ 0.33
PCOTH-203ENST00000435039 DAPK1P53355 1430 aa17.13■□□□□ 0.33
PCOTH-203ENST00000435039 GCC2Q8IWJ2 1684 aa17.12■□□□□ 0.33
PCOTH-203ENST00000435039 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
PCOTH-203ENST00000435039 KIAA1107Q9UPP5 1409 aa17.09■□□□□ 0.33
PCOTH-203ENST00000435039 CCDC141Q6ZP82 1450 aa17.09■□□□□ 0.33
PCOTH-203ENST00000435039 FANCAO15360 1455 aa17.08■□□□□ 0.32
PCOTH-203ENST00000435039 ABCC5O15440 1437 aa17.08■□□□□ 0.32
PCOTH-203ENST00000435039 PTPRKQ15262 1439 aa17.08■□□□□ 0.32
PCOTH-203ENST00000435039 MAST1Q9Y2H9 1570 aa17.07■□□□□ 0.32
PCOTH-203ENST00000435039 ADGRL2O95490 1459 aa17.07■□□□□ 0.32
PCOTH-203ENST00000435039 MBD5Q9P267 1494 aa17.07■□□□□ 0.32
PCOTH-203ENST00000435039 HFM1A2PYH4 1435 aa17.06■□□□□ 0.32
PCOTH-203ENST00000435039 ZNF644Q9H582 1327 aaPredicted RBP17.06■□□□□ 0.32
PCOTH-203ENST00000435039 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
PCOTH-203ENST00000435039 HECW2Q9P2P5 1572 aa17.04■□□□□ 0.32
PCOTH-203ENST00000435039 ITGAEP38570 1179 aa17.04■□□□□ 0.32
PCOTH-203ENST00000435039 EFCAB2Q5VUJ9 269 aa17.03■□□□□ 0.32
PCOTH-203ENST00000435039 ZNF777Q9ULD5 760 aaPredicted RBP17.03■□□□□ 0.32
PCOTH-203ENST00000435039 NEO1Q92859 1461 aa17.03■□□□□ 0.32
PCOTH-203ENST00000435039 C9orf84Q5VXU9 1444 aa17.02■□□□□ 0.31
PCOTH-203ENST00000435039 PLXNC1O60486 1568 aa17.02■□□□□ 0.31
PCOTH-203ENST00000435039 SETD5Q9C0A6 1442 aa17.01■□□□□ 0.31
PCOTH-203ENST00000435039 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
PCOTH-203ENST00000435039 NAIPQ13075 1403 aa17■□□□□ 0.31
PCOTH-203ENST00000435039 RSPH4AQ5TD94 716 aa16.99■□□□□ 0.31
PCOTH-203ENST00000435039 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
PCOTH-203ENST00000435039 ZFYVE16Q7Z3T8 1539 aa16.97■□□□□ 0.31
PCOTH-203ENST00000435039 RAB3GAP2Q9H2M9 1393 aa16.97■□□□□ 0.31
PCOTH-203ENST00000435039 KDM5CP41229 1560 aa16.95■□□□□ 0.3
PCOTH-203ENST00000435039 ANKRD30AQ9BXX3 1397 aa16.95■□□□□ 0.3
PCOTH-203ENST00000435039 NCOA1Q15788 1441 aa16.95■□□□□ 0.3
PCOTH-203ENST00000435039 ZNF518AQ6AHZ1 1483 aa16.94■□□□□ 0.3
PCOTH-203ENST00000435039 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
PCOTH-203ENST00000435039 POGZQ7Z3K3 1410 aa16.94■□□□□ 0.3
PCOTH-203ENST00000435039 TRAPPC8Q9Y2L5 1435 aa16.94■□□□□ 0.3
PCOTH-203ENST00000435039 FRMPD1Q5SYB0 1578 aa16.94■□□□□ 0.3
PCOTH-203ENST00000435039 HRCP23327 699 aa16.92■□□□□ 0.3
PCOTH-203ENST00000435039 HNRNPMP52272 730 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCOTH-203ENST00000435039 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
PCOTH-203ENST00000435039 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
PCOTH-203ENST00000435039 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
PCOTH-203ENST00000435039 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
PCOTH-203ENST00000435039 RTEL1-TNFRSF6BF6WH68 1400 aa16.91■□□□□ 0.3
PCOTH-203ENST00000435039 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
PCOTH-203ENST00000435039 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
PCOTH-203ENST00000435039 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
PCOTH-203ENST00000435039 CHIC2Q9UKJ5 165 aa16.9■□□□□ 0.3
PCOTH-203ENST00000435039 KIF15Q9NS87 1388 aa16.89■□□□□ 0.29
PCOTH-203ENST00000435039 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
PCOTH-203ENST00000435039 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
PCOTH-203ENST00000435039 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
PCOTH-203ENST00000435039 ZMYM4Q5VZL5 1548 aa16.87■□□□□ 0.29
PCOTH-203ENST00000435039 BCORL1Q5H9F3 1711 aa16.87■□□□□ 0.29
PCOTH-203ENST00000435039 KIDINS220Q9ULH0 1771 aa16.87■□□□□ 0.29
PCOTH-203ENST00000435039 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
PCOTH-203ENST00000435039 PTPRMP28827 1452 aa16.86■□□□□ 0.29
PCOTH-203ENST00000435039 DHX57Q6P158 1386 aaKnown RBP16.85■□□□□ 0.29
PCOTH-203ENST00000435039 ERBINQ96RT1 1412 aa16.85■□□□□ 0.29
PCOTH-203ENST00000435039 ANKRD50Q9ULJ7 1429 aa16.85■□□□□ 0.29
PCOTH-203ENST00000435039 MLH3Q9UHC1 1453 aa16.85■□□□□ 0.29
PCOTH-203ENST00000435039 SPAG9O60271 1321 aaKnown RBP16.84■□□□□ 0.29
PCOTH-203ENST00000435039 ARHGEF40Q8TER5 1519 aa16.84■□□□□ 0.29
PCOTH-203ENST00000435039 UNC13BO14795 1591 aa16.84■□□□□ 0.29
PCOTH-203ENST00000435039 EIF2AK4Q9P2K8 1649 aaKnown RBP16.84■□□□□ 0.29
PCOTH-203ENST00000435039 MADDQ8WXG6 1647 aa16.83■□□□□ 0.28
PCOTH-203ENST00000435039 KDM5DQ9BY66 1539 aa16.83■□□□□ 0.28
PCOTH-203ENST00000435039 ABCA6Q8N139 1617 aa16.81■□□□□ 0.28
PCOTH-203ENST00000435039 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
PCOTH-203ENST00000435039 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
PCOTH-203ENST00000435039 CLSPNQ9HAW4 1339 aa16.79■□□□□ 0.28
PCOTH-203ENST00000435039 DEPDC5O75140 1603 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms