RNA–Protein interactions for RNA: ENST00000434859.1

AP000477.1-202, humanhuman

TSL 3 BASIC

Gene AP000477.1, Length 847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000477.1-202ENST00000434859 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
AP000477.1-202ENST00000434859 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
AP000477.1-202ENST00000434859 C2orf72A6NCS6 295 aa12.29□□□□□ -0.44
AP000477.1-202ENST00000434859 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
AP000477.1-202ENST00000434859 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
AP000477.1-202ENST00000434859 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
AP000477.1-202ENST00000434859 EMP3P54852 163 aa12.25□□□□□ -0.45
AP000477.1-202ENST00000434859 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
AP000477.1-202ENST00000434859 POTEB3A0JP26 581 aa12.24□□□□□ -0.45
AP000477.1-202ENST00000434859 POTEBQ6S5H4 581 aa12.24□□□□□ -0.45
AP000477.1-202ENST00000434859 GTPBP6O43824 516 aaPredicted RBP12.23□□□□□ -0.45
AP000477.1-202ENST00000434859 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
AP000477.1-202ENST00000434859 GPR153Q6NV75 609 aa12.2□□□□□ -0.46
AP000477.1-202ENST00000434859 TMC2Q8TDI7 906 aa12.2□□□□□ -0.46
AP000477.1-202ENST00000434859 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
AP000477.1-202ENST00000434859 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
AP000477.1-202ENST00000434859 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
AP000477.1-202ENST00000434859 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
AP000477.1-202ENST00000434859 RYDENQ9NUL5 291 aaKnown RBP12.18□□□□□ -0.46
AP000477.1-202ENST00000434859 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
AP000477.1-202ENST00000434859 KHSRPQ92945 711 aaKnown RBP eCLIP12.15□□□□□ -0.46
AP000477.1-202ENST00000434859 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
AP000477.1-202ENST00000434859 SLC34A2O95436 690 aa12.1□□□□□ -0.47
AP000477.1-202ENST00000434859 FOXK1P85037 733 aa12.1□□□□□ -0.47
AP000477.1-202ENST00000434859 DSG2Q14126 1118 aa12.1□□□□□ -0.47
AP000477.1-202ENST00000434859 ERBB3P21860 1342 aa12.1□□□□□ -0.47
AP000477.1-202ENST00000434859 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
AP000477.1-202ENST00000434859 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
AP000477.1-202ENST00000434859 VARS2Q5ST30 1063 aaKnown RBP12.07□□□□□ -0.48
AP000477.1-202ENST00000434859 KRTAP3-3Q9BYR6 98 aa12.07□□□□□ -0.48
AP000477.1-202ENST00000434859 KRTAP3-2Q9BYR7 98 aa12.07□□□□□ -0.48
AP000477.1-202ENST00000434859 PCDHGA4Q9Y5G9 962 aa12.07□□□□□ -0.48
AP000477.1-202ENST00000434859 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
AP000477.1-202ENST00000434859 BBXQ8WY36 941 aaPredicted RBP12.06□□□□□ -0.48
AP000477.1-202ENST00000434859 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
AP000477.1-202ENST00000434859 NUDT7P0C024 238 aa12.03□□□□□ -0.48
AP000477.1-202ENST00000434859 CADPS2Q86UW7 1296 aa12.02□□□□□ -0.49
AP000477.1-202ENST00000434859 MMRN1Q13201 1228 aa12.01□□□□□ -0.49
AP000477.1-202ENST00000434859 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
AP000477.1-202ENST00000434859 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
AP000477.1-202ENST00000434859 KDM4FA0A1W2PPD8 638 aa11.99□□□□□ -0.49
AP000477.1-202ENST00000434859 PDE4AP27815 886 aa11.98□□□□□ -0.49
AP000477.1-202ENST00000434859 PPP1R15BQ5SWA1 713 aa11.97□□□□□ -0.49
AP000477.1-202ENST00000434859 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
AP000477.1-202ENST00000434859 ZNF687Q8N1G0 1237 aa11.96□□□□□ -0.49
AP000477.1-202ENST00000434859 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
AP000477.1-202ENST00000434859 MFSD10Q14728 455 aa11.93□□□□□ -0.5
AP000477.1-202ENST00000434859 OXER1Q8TDS5 423 aa11.93□□□□□ -0.5
AP000477.1-202ENST00000434859 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
AP000477.1-202ENST00000434859 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
AP000477.1-202ENST00000434859 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
AP000477.1-202ENST00000434859 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
AP000477.1-202ENST00000434859 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
AP000477.1-202ENST00000434859 TBC1D12O60347 775 aa11.86□□□□□ -0.51
AP000477.1-202ENST00000434859 PAXIP1Q6ZW49 1069 aaPredicted RBP11.85□□□□□ -0.51
AP000477.1-202ENST00000434859 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
AP000477.1-202ENST00000434859 EMILIN3Q9NT22 766 aa11.84□□□□□ -0.51
AP000477.1-202ENST00000434859 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
AP000477.1-202ENST00000434859 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
AP000477.1-202ENST00000434859 LSM11P83369 360 aaKnown RBP eCLIP11.78□□□□□ -0.52
AP000477.1-202ENST00000434859 PBX2P40425 430 aa11.77□□□□□ -0.53
AP000477.1-202ENST00000434859 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.53
AP000477.1-202ENST00000434859 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
AP000477.1-202ENST00000434859 EVI5O60447 810 aa11.76□□□□□ -0.53
AP000477.1-202ENST00000434859 CAMK2BQ13554 666 aa11.76□□□□□ -0.53
AP000477.1-202ENST00000434859 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
AP000477.1-202ENST00000434859 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
AP000477.1-202ENST00000434859 ARHGAP33O14559 1287 aa11.72□□□□□ -0.53
AP000477.1-202ENST00000434859 PSEN2P49810 448 aa11.72□□□□□ -0.53
AP000477.1-202ENST00000434859 ZNF454Q8N9F8 522 aa11.72□□□□□ -0.53
AP000477.1-202ENST00000434859 FOSBP53539 338 aa11.71□□□□□ -0.53
AP000477.1-202ENST00000434859 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.53
AP000477.1-202ENST00000434859 DPYSL4O14531 572 aa11.68□□□□□ -0.54
AP000477.1-202ENST00000434859 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
AP000477.1-202ENST00000434859 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
AP000477.1-202ENST00000434859 KCNK17Q96T54 332 aa11.65□□□□□ -0.54
AP000477.1-202ENST00000434859 ADGRD1Q6QNK2 874 aa11.64□□□□□ -0.55
AP000477.1-202ENST00000434859 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
AP000477.1-202ENST00000434859 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
AP000477.1-202ENST00000434859 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
AP000477.1-202ENST00000434859 PCDHGA10Q9Y5H3 936 aa11.63□□□□□ -0.55
AP000477.1-202ENST00000434859 PTGER2P43116 358 aa11.62□□□□□ -0.55
AP000477.1-202ENST00000434859 ADAM33Q9BZ11 813 aa11.62□□□□□ -0.55
AP000477.1-202ENST00000434859 ZDHHC16Q969W1 377 aa11.61□□□□□ -0.55
AP000477.1-202ENST00000434859 TK2O00142 265 aa11.6□□□□□ -0.55
AP000477.1-202ENST00000434859 HRO43593 1189 aa11.59□□□□□ -0.55
AP000477.1-202ENST00000434859 E2F4Q16254 413 aa11.59□□□□□ -0.55
AP000477.1-202ENST00000434859 WDR70Q9NW82 654 aa11.57□□□□□ -0.56
AP000477.1-202ENST00000434859 PHF14O94880 888 aa11.56□□□□□ -0.56
AP000477.1-202ENST00000434859 PTPREP23469 700 aa11.56□□□□□ -0.56
AP000477.1-202ENST00000434859 VPS9D1Q9Y2B5 631 aa11.56□□□□□ -0.56
AP000477.1-202ENST00000434859 PDIA6Q15084 440 aa11.55□□□□□ -0.56
AP000477.1-202ENST00000434859 DDX12PQ92771 950 aa11.54□□□□□ -0.56
AP000477.1-202ENST00000434859 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
AP000477.1-202ENST00000434859 ARIH1Q9Y4X5 557 aaPredicted RBP11.54□□□□□ -0.56
AP000477.1-202ENST00000434859 TYW1BQ6NUM6 668 aa11.53□□□□□ -0.56
AP000477.1-202ENST00000434859 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
AP000477.1-202ENST00000434859 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
AP000477.1-202ENST00000434859 COL9A1P20849 921 aa11.51□□□□□ -0.57
AP000477.1-202ENST00000434859 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms