RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 MYOM3Q5VTT5 1437 aa13.68□□□□□ -0.22
LINC01007-201ENST00000434537 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
LINC01007-201ENST00000434537 RAB3GAP2Q9H2M9 1393 aa13.67□□□□□ -0.22
LINC01007-201ENST00000434537 PLB1Q6P1J6 1458 aa13.66□□□□□ -0.22
LINC01007-201ENST00000434537 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
LINC01007-201ENST00000434537 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
LINC01007-201ENST00000434537 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
LINC01007-201ENST00000434537 PTPN23Q9H3S7 1636 aa13.63□□□□□ -0.23
LINC01007-201ENST00000434537 MAPKBP1O60336 1514 aa13.62□□□□□ -0.23
LINC01007-201ENST00000434537 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
LINC01007-201ENST00000434537 CLSPNQ9HAW4 1339 aa13.62□□□□□ -0.23
LINC01007-201ENST00000434537 DIP2BQ9P265 1576 aa13.61□□□□□ -0.23
LINC01007-201ENST00000434537 ADCY10Q96PN6 1610 aa13.61□□□□□ -0.23
LINC01007-201ENST00000434537 PTPRKQ15262 1439 aa13.6□□□□□ -0.23
LINC01007-201ENST00000434537 ABCA8O94911 1581 aa13.58□□□□□ -0.24
LINC01007-201ENST00000434537 TCOF1Q13428 1488 aaKnown RBP13.57□□□□□ -0.24
LINC01007-201ENST00000434537 FKBP8Q14318 412 aa13.57□□□□□ -0.24
LINC01007-201ENST00000434537 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
LINC01007-201ENST00000434537 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
LINC01007-201ENST00000434537 KDM6BO15054 1643 aa13.55□□□□□ -0.24
LINC01007-201ENST00000434537 MYT1Q01538 1121 aa13.55□□□□□ -0.24
LINC01007-201ENST00000434537 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
LINC01007-201ENST00000434537 HFM1A2PYH4 1435 aa13.54□□□□□ -0.24
LINC01007-201ENST00000434537 KIF14Q15058 1648 aa13.53□□□□□ -0.24
LINC01007-201ENST00000434537 PTPRGP23470 1445 aa13.52□□□□□ -0.24
LINC01007-201ENST00000434537 ATP10BO94823 1461 aa13.52□□□□□ -0.25
LINC01007-201ENST00000434537 NAIPQ13075 1403 aa13.51□□□□□ -0.25
LINC01007-201ENST00000434537 KDM4FA0A1W2PPD8 638 aa13.51□□□□□ -0.25
LINC01007-201ENST00000434537 ACIN1Q9UKV3 1341 aaKnown RBP13.51□□□□□ -0.25
LINC01007-201ENST00000434537 DIEXFQ68CQ4 756 aaKnown RBP13.51□□□□□ -0.25
LINC01007-201ENST00000434537 TSPOAP1O95153 1857 aa13.5□□□□□ -0.25
LINC01007-201ENST00000434537 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
LINC01007-201ENST00000434537 CHIC2Q9UKJ5 165 aa13.49□□□□□ -0.25
LINC01007-201ENST00000434537 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
LINC01007-201ENST00000434537 NEUROD1Q13562 356 aa13.48□□□□□ -0.25
LINC01007-201ENST00000434537 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
LINC01007-201ENST00000434537 ZNF644Q9H582 1327 aaPredicted RBP13.48□□□□□ -0.25
LINC01007-201ENST00000434537 ITSN2Q9NZM3 1697 aa13.48□□□□□ -0.25
LINC01007-201ENST00000434537 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
LINC01007-201ENST00000434537 GCC2Q8IWJ2 1684 aa13.47□□□□□ -0.25
LINC01007-201ENST00000434537 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
LINC01007-201ENST00000434537 PLEKHD1A6NEE1 506 aa13.46□□□□□ -0.25
LINC01007-201ENST00000434537 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
LINC01007-201ENST00000434537 DNMT1P26358 1616 aaKnown RBP13.46□□□□□ -0.25
LINC01007-201ENST00000434537 DAPK1P53355 1430 aa13.45□□□□□ -0.26
LINC01007-201ENST00000434537 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
LINC01007-201ENST00000434537 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
LINC01007-201ENST00000434537 CAMSAP2Q08AD1 1489 aa13.44□□□□□ -0.26
LINC01007-201ENST00000434537 CDC42BPAQ5VT25 1732 aa13.44□□□□□ -0.26
LINC01007-201ENST00000434537 ABCC5O15440 1437 aa13.43□□□□□ -0.26
LINC01007-201ENST00000434537 ABCC2Q92887 1545 aa13.43□□□□□ -0.26
LINC01007-201ENST00000434537 CFDP1Q9UEE9 299 aaPredicted RBP13.43□□□□□ -0.26
LINC01007-201ENST00000434537 SIN3AQ96ST3 1273 aa13.42□□□□□ -0.26
LINC01007-201ENST00000434537 GLI2P10070 1586 aa13.42□□□□□ -0.26
LINC01007-201ENST00000434537 ASXL2Q76L83 1435 aa13.41□□□□□ -0.26
LINC01007-201ENST00000434537 PPRC1Q5VV67 1664 aaKnown RBP13.41□□□□□ -0.26
LINC01007-201ENST00000434537 NPM2Q86SE8 214 aaKnown RBP13.41□□□□□ -0.26
LINC01007-201ENST00000434537 ZNF777Q9ULD5 760 aaPredicted RBP13.4□□□□□ -0.26
LINC01007-201ENST00000434537 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.27
LINC01007-201ENST00000434537 CENPBP07199 599 aaPredicted RBP13.39□□□□□ -0.27
LINC01007-201ENST00000434537 ROCK1Q13464 1354 aa13.39□□□□□ -0.27
LINC01007-201ENST00000434537 CROCC2H7BZ55 1655 aa13.38□□□□□ -0.27
LINC01007-201ENST00000434537 C14orf37Q86TY3 774 aa13.37□□□□□ -0.27
LINC01007-201ENST00000434537 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
LINC01007-201ENST00000434537 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
LINC01007-201ENST00000434537 EIF5BO60841 1220 aaKnown RBP13.36□□□□□ -0.27
LINC01007-201ENST00000434537 ADGBQ8N7X0 1667 aa13.35□□□□□ -0.27
LINC01007-201ENST00000434537 CDC42BPBQ9Y5S2 1711 aa13.35□□□□□ -0.27
LINC01007-201ENST00000434537 DENND4BO75064 1496 aaPredicted RBP13.35□□□□□ -0.27
LINC01007-201ENST00000434537 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
LINC01007-201ENST00000434537 ZCCHC11Q5TAX3 1644 aaKnown RBP13.34□□□□□ -0.27
LINC01007-201ENST00000434537 TTC37Q6PGP7 1564 aa13.34□□□□□ -0.27
LINC01007-201ENST00000434537 TRIM52Q96A61 297 aa13.34□□□□□ -0.27
LINC01007-201ENST00000434537 PREX2Q70Z35 1606 aa13.34□□□□□ -0.27
LINC01007-201ENST00000434537 COL17A1Q9UMD9 1497 aaPredicted RBP13.33□□□□□ -0.28
LINC01007-201ENST00000434537 MAP3K4Q9Y6R4 1608 aa13.32□□□□□ -0.28
LINC01007-201ENST00000434537 NCOA1Q15788 1441 aa13.32□□□□□ -0.28
LINC01007-201ENST00000434537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC01007-201ENST00000434537 KDM5BQ9UGL1 1544 aa13.32□□□□□ -0.28
LINC01007-201ENST00000434537 ADGRL2O95490 1459 aa13.31□□□□□ -0.28
LINC01007-201ENST00000434537 SAMD9LQ8IVG5 1584 aa13.31□□□□□ -0.28
LINC01007-201ENST00000434537 TEX14Q8IWB6 1497 aa13.3□□□□□ -0.28
LINC01007-201ENST00000434537 MPHOSPH9Q99550 1183 aa13.29□□□□□ -0.28
LINC01007-201ENST00000434537 SHANK2Q9UPX8 1470 aa13.28□□□□□ -0.28
LINC01007-201ENST00000434537 C9orf84Q5VXU9 1444 aa13.28□□□□□ -0.28
LINC01007-201ENST00000434537 MYO5CQ9NQX4 1742 aa13.28□□□□□ -0.28
LINC01007-201ENST00000434537 HNRNPMP52272 730 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC01007-201ENST00000434537 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
LINC01007-201ENST00000434537 ARHGEF5Q12774 1597 aa13.27□□□□□ -0.28
LINC01007-201ENST00000434537 MBD5Q9P267 1494 aa13.27□□□□□ -0.28
LINC01007-201ENST00000434537 TONSLQ96HA7 1378 aa13.27□□□□□ -0.28
LINC01007-201ENST00000434537 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.28
LINC01007-201ENST00000434537 ARHGAP5Q13017 1502 aa13.27□□□□□ -0.29
LINC01007-201ENST00000434537 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
LINC01007-201ENST00000434537 FOXD1Q16676 465 aa13.26□□□□□ -0.29
LINC01007-201ENST00000434537 HECW2Q9P2P5 1572 aa13.26□□□□□ -0.29
LINC01007-201ENST00000434537 SYCP2Q9BX26 1530 aa13.25□□□□□ -0.29
LINC01007-201ENST00000434537 WDR7Q9Y4E6 1490 aa13.24□□□□□ -0.29
LINC01007-201ENST00000434537 CCDC141Q6ZP82 1450 aa13.24□□□□□ -0.29
LINC01007-201ENST00000434537 ANKRD50Q9ULJ7 1429 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms