RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 CDK13Q14004 1512 aaKnown RBP20.54■□□□□ 0.88
TMCO3-202ENST00000434316 ERICH6BQ5W0A0 696 aa20.54■□□□□ 0.88
TMCO3-202ENST00000434316 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
TMCO3-202ENST00000434316 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.88
TMCO3-202ENST00000434316 ERICH6Q7L0X2 663 aa20.52■□□□□ 0.88
TMCO3-202ENST00000434316 ZBED9Q6R2W3 1325 aa20.5■□□□□ 0.87
TMCO3-202ENST00000434316 KIF7Q2M1P5 1343 aa20.49■□□□□ 0.87
TMCO3-202ENST00000434316 ANKRD30BQ9BXX2 1392 aa20.49■□□□□ 0.87
TMCO3-202ENST00000434316 MIA2Q96PC5 1412 aa20.49■□□□□ 0.87
TMCO3-202ENST00000434316 RPRD2Q5VT52 1461 aaKnown RBP20.47■□□□□ 0.87
TMCO3-202ENST00000434316 TEX14Q8IWB6 1497 aa20.47■□□□□ 0.87
TMCO3-202ENST00000434316 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
TMCO3-202ENST00000434316 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
TMCO3-202ENST00000434316 ZNF644Q9H582 1327 aaPredicted RBP20.43■□□□□ 0.86
TMCO3-202ENST00000434316 DAPK1P53355 1430 aa20.43■□□□□ 0.86
TMCO3-202ENST00000434316 SLC4A1APQ9BWU0 796 aaKnown RBP20.42■□□□□ 0.86
TMCO3-202ENST00000434316 WDR62O43379 1518 aa20.42■□□□□ 0.86
TMCO3-202ENST00000434316 IQGAP2Q13576 1575 aa20.42■□□□□ 0.86
TMCO3-202ENST00000434316 TARBP1Q13395 1621 aaKnown RBP20.4■□□□□ 0.86
TMCO3-202ENST00000434316 ABCC5O15440 1437 aa20.4■□□□□ 0.86
TMCO3-202ENST00000434316 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
TMCO3-202ENST00000434316 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
TMCO3-202ENST00000434316 ROCK1Q13464 1354 aa20.38■□□□□ 0.85
TMCO3-202ENST00000434316 SENP3-EIF4A1A0A087X0R7 540 aa20.37■□□□□ 0.85
TMCO3-202ENST00000434316 POLR3GLQ9BT43 218 aa20.37■□□□□ 0.85
TMCO3-202ENST00000434316 POLR1AO95602 1720 aaPredicted RBP20.36■□□□□ 0.85
TMCO3-202ENST00000434316 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
TMCO3-202ENST00000434316 DNMT1P26358 1616 aaKnown RBP20.34■□□□□ 0.85
TMCO3-202ENST00000434316 DHX29Q7Z478 1369 aaKnown RBP20.34■□□□□ 0.85
TMCO3-202ENST00000434316 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
TMCO3-202ENST00000434316 SMG6Q86US8 1419 aaKnown RBP20.31■□□□□ 0.84
TMCO3-202ENST00000434316 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
TMCO3-202ENST00000434316 PZPP20742 1482 aa20.3■□□□□ 0.84
TMCO3-202ENST00000434316 BCORL1Q5H9F3 1711 aa20.29■□□□□ 0.84
TMCO3-202ENST00000434316 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
TMCO3-202ENST00000434316 USP47Q96K76 1375 aa20.27■□□□□ 0.84
TMCO3-202ENST00000434316 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
TMCO3-202ENST00000434316 NUP153P49790 1475 aaKnown RBP20.25■□□□□ 0.83
TMCO3-202ENST00000434316 MBD5Q9P267 1494 aa20.25■□□□□ 0.83
TMCO3-202ENST00000434316 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
TMCO3-202ENST00000434316 CCDC136Q96JN2 1154 aa20.23■□□□□ 0.83
TMCO3-202ENST00000434316 RNF123Q5XPI4 1314 aa20.23■□□□□ 0.83
TMCO3-202ENST00000434316 DISP1Q96F81 1524 aa20.21■□□□□ 0.83
TMCO3-202ENST00000434316 DEKP35659 375 aaKnown RBP20.21■□□□□ 0.83
TMCO3-202ENST00000434316 PKD2Q13563 968 aa20.21■□□□□ 0.83
TMCO3-202ENST00000434316 NBR1Q14596 966 aa20.2■□□□□ 0.82
TMCO3-202ENST00000434316 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
TMCO3-202ENST00000434316 KIAA1107Q9UPP5 1409 aa20.2■□□□□ 0.82
TMCO3-202ENST00000434316 ZNF777Q9ULD5 760 aaPredicted RBP20.2■□□□□ 0.82
TMCO3-202ENST00000434316 CAMSAP2Q08AD1 1489 aa20.2■□□□□ 0.82
TMCO3-202ENST00000434316 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
TMCO3-202ENST00000434316 PNISRQ8TF01 805 aaKnown RBP20.19■□□□□ 0.82
TMCO3-202ENST00000434316 CFDP1Q9UEE9 299 aaPredicted RBP20.19■□□□□ 0.82
TMCO3-202ENST00000434316 KDM5CP41229 1560 aa20.18■□□□□ 0.82
TMCO3-202ENST00000434316 RAPGEF6Q8TEU7 1601 aa20.17■□□□□ 0.82
TMCO3-202ENST00000434316 TMC1Q8TDI8 760 aa20.16■□□□□ 0.82
TMCO3-202ENST00000434316 KIF14Q15058 1648 aa20.16■□□□□ 0.82
TMCO3-202ENST00000434316 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
TMCO3-202ENST00000434316 ZNF608Q9ULD9 1512 aaPredicted RBP20.14■□□□□ 0.81
TMCO3-202ENST00000434316 KIAA0586Q9BVV6 1533 aa20.13■□□□□ 0.81
TMCO3-202ENST00000434316 TROQ12816 1431 aaPredicted RBP20.13■□□□□ 0.81
TMCO3-202ENST00000434316 ADGBQ8N7X0 1667 aa20.12■□□□□ 0.81
TMCO3-202ENST00000434316 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
TMCO3-202ENST00000434316 CARD11Q9BXL7 1154 aa20.11■□□□□ 0.81
TMCO3-202ENST00000434316 ARID4BQ4LE39 1312 aaPredicted RBP20.11■□□□□ 0.81
TMCO3-202ENST00000434316 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
TMCO3-202ENST00000434316 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
TMCO3-202ENST00000434316 ADGRL2O95490 1459 aa20.09■□□□□ 0.81
TMCO3-202ENST00000434316 IPO9Q96P70 1041 aaKnown RBP20.09■□□□□ 0.81
TMCO3-202ENST00000434316 RALGAPBQ86X10 1494 aa20.08■□□□□ 0.81
TMCO3-202ENST00000434316 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.8
TMCO3-202ENST00000434316 ANKRD50Q9ULJ7 1429 aa20.07■□□□□ 0.8
TMCO3-202ENST00000434316 ROCK2O75116 1388 aaKnown RBP20.07■□□□□ 0.8
TMCO3-202ENST00000434316 ANKRD30AQ9BXX3 1397 aa20.07■□□□□ 0.8
TMCO3-202ENST00000434316 KIF15Q9NS87 1388 aa20.07■□□□□ 0.8
TMCO3-202ENST00000434316 PLB1Q6P1J6 1458 aa20.07■□□□□ 0.8
TMCO3-202ENST00000434316 UHRF1BP1Q6BDS2 1440 aa20.07■□□□□ 0.8
TMCO3-202ENST00000434316 MRC2Q9UBG0 1479 aa20.06■□□□□ 0.8
TMCO3-202ENST00000434316 ITSN2Q9NZM3 1697 aa20.06■□□□□ 0.8
TMCO3-202ENST00000434316 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
TMCO3-202ENST00000434316 CROCC2H7BZ55 1655 aa20.06■□□□□ 0.8
TMCO3-202ENST00000434316 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
TMCO3-202ENST00000434316 NUP155O75694 1391 aa20.05■□□□□ 0.8
TMCO3-202ENST00000434316 EXOC6Q8TAG9 804 aa20.03■□□□□ 0.8
TMCO3-202ENST00000434316 MYBBP1AQ9BQG0 1328 aaKnown RBP20.03■□□□□ 0.8
TMCO3-202ENST00000434316 RRP1P56182 461 aaKnown RBP20.02■□□□□ 0.8
TMCO3-202ENST00000434316 ZBTB47Q9UFB7 747 aaPredicted RBP20.02■□□□□ 0.8
TMCO3-202ENST00000434316 GRIN2AQ12879 1464 aa20.02■□□□□ 0.8
TMCO3-202ENST00000434316 BRD4O60885 1362 aaPredicted RBP20.02■□□□□ 0.79
TMCO3-202ENST00000434316 DCAF11Q8TEB1 546 aa20.01■□□□□ 0.79
TMCO3-202ENST00000434316 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
TMCO3-202ENST00000434316 RALBP1Q15311 655 aa19.99■□□□□ 0.79
TMCO3-202ENST00000434316 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
TMCO3-202ENST00000434316 NPM2Q86SE8 214 aaKnown RBP19.98■□□□□ 0.79
TMCO3-202ENST00000434316 RCAN3Q9UKA8 241 aa19.97■□□□□ 0.79
TMCO3-202ENST00000434316 ARHGEF12Q9NZN5 1544 aa19.97■□□□□ 0.79
TMCO3-202ENST00000434316 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
TMCO3-202ENST00000434316 E9PCH4 1651 aa19.94■□□□□ 0.78
TMCO3-202ENST00000434316 CDC42BPAQ5VT25 1732 aa19.94■□□□□ 0.78
TMCO3-202ENST00000434316 RTL5Q5HYW3 569 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms