RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 ZMYM4Q5VZL5 1548 aa32.51■■■□□ 2.79
LMBR1-208ENST00000434278 ARHGEF40Q8TER5 1519 aa32.49■■■□□ 2.79
LMBR1-208ENST00000434278 POGZQ7Z3K3 1410 aa32.49■■■□□ 2.79
LMBR1-208ENST00000434278 CDC42BPBQ9Y5S2 1711 aa32.48■■■□□ 2.79
LMBR1-208ENST00000434278 PREX2Q70Z35 1606 aa32.44■■■□□ 2.78
LMBR1-208ENST00000434278 YEATS2Q9ULM3 1422 aa32.43■■■□□ 2.78
LMBR1-208ENST00000434278 ZFYVE16Q7Z3T8 1539 aa32.42■■■□□ 2.78
LMBR1-208ENST00000434278 MAGI2Q86UL8 1455 aa32.42■■■□□ 2.78
LMBR1-208ENST00000434278 CDC42BPAQ5VT25 1732 aa32.39■■■□□ 2.78
LMBR1-208ENST00000434278 ADAMTSL3P82987 1691 aa32.38■■■□□ 2.77
LMBR1-208ENST00000434278 ARID4BQ4LE39 1312 aaPredicted RBP32.38■■■□□ 2.77
LMBR1-208ENST00000434278 BCORL1Q5H9F3 1711 aa32.36■■■□□ 2.77
LMBR1-208ENST00000434278 AFAP1Q8N556 730 aa32.34■■■□□ 2.77
LMBR1-208ENST00000434278 ZNF518AQ6AHZ1 1483 aa32.34■■■□□ 2.77
LMBR1-208ENST00000434278 MTUS2Q5JR59 1369 aa32.32■■■□□ 2.77
LMBR1-208ENST00000434278 GPATCH8Q9UKJ3 1502 aaKnown RBP32.32■■■□□ 2.76
LMBR1-208ENST00000434278 SIGLEC1Q9BZZ2 1709 aa32.32■■■□□ 2.76
LMBR1-208ENST00000434278 ABCC1P33527 1531 aa32.31■■■□□ 2.76
LMBR1-208ENST00000434278 ARHGEF12Q9NZN5 1544 aa32.31■■■□□ 2.76
LMBR1-208ENST00000434278 KDM5CP41229 1560 aa32.31■■■□□ 2.76
LMBR1-208ENST00000434278 ITSN2Q9NZM3 1697 aa32.27■■■□□ 2.76
LMBR1-208ENST00000434278 TRAPPC8Q9Y2L5 1435 aa32.26■■■□□ 2.76
LMBR1-208ENST00000434278 MADDQ8WXG6 1647 aa32.26■■■□□ 2.76
LMBR1-208ENST00000434278 ATP10AO60312 1499 aa32.26■■■□□ 2.75
LMBR1-208ENST00000434278 PTPRMP28827 1452 aa32.25■■■□□ 2.75
LMBR1-208ENST00000434278 EHBP1L1Q8N3D4 1523 aa32.25■■■□□ 2.75
LMBR1-208ENST00000434278 ZNF777Q9ULD5 760 aaPredicted RBP32.24■■■□□ 2.75
LMBR1-208ENST00000434278 SAMD9LQ8IVG5 1584 aa32.24■■■□□ 2.75
LMBR1-208ENST00000434278 CCNB3Q8WWL7 1395 aa32.23■■■□□ 2.75
LMBR1-208ENST00000434278 VPS8Q8N3P4 1428 aa32.23■■■□□ 2.75
LMBR1-208ENST00000434278 HECW2Q9P2P5 1572 aa32.22■■■□□ 2.75
LMBR1-208ENST00000434278 C9orf84Q5VXU9 1444 aa32.21■■■□□ 2.75
LMBR1-208ENST00000434278 MLH3Q9UHC1 1453 aa32.19■■■□□ 2.74
LMBR1-208ENST00000434278 CFDP1Q9UEE9 299 aaPredicted RBP32.18■■■□□ 2.74
LMBR1-208ENST00000434278 MYT1LQ9UL68 1186 aa32.18■■■□□ 2.74
LMBR1-208ENST00000434278 TIAM1Q13009 1591 aa32.16■■■□□ 2.74
LMBR1-208ENST00000434278 DIP2CQ9Y2E4 1556 aa32.16■■■□□ 2.74
LMBR1-208ENST00000434278 SYCP2Q9BX26 1530 aa32.16■■■□□ 2.74
LMBR1-208ENST00000434278 RIMS1Q86UR5 1692 aaKnown RBP32.15■■■□□ 2.74
LMBR1-208ENST00000434278 MLECQ14165 292 aa32.15■■■□□ 2.74
LMBR1-208ENST00000434278 ABCA6Q8N139 1617 aa32.14■■■□□ 2.74
LMBR1-208ENST00000434278 HNRNPMP52272 730 aaKnown RBP eCLIP32.13■■■□□ 2.732e-6■■■□□ 18.8
LMBR1-208ENST00000434278 KIAA1107Q9UPP5 1409 aa32.09■■■□□ 2.73
LMBR1-208ENST00000434278 KIDINS220Q9ULH0 1771 aa32.09■■■□□ 2.73
LMBR1-208ENST00000434278 PLEKHH2Q8IVE3 1493 aa32.09■■■□□ 2.73
LMBR1-208ENST00000434278 NCOA2Q15596 1464 aa32.08■■■□□ 2.73
LMBR1-208ENST00000434278 REREQ9P2R6 1566 aa32.07■■■□□ 2.72
LMBR1-208ENST00000434278 SUPT6HQ7KZ85 1726 aaKnown RBP32.07■■■□□ 2.72
LMBR1-208ENST00000434278 ZNF644Q9H582 1327 aaPredicted RBP32.06■■■□□ 2.72
LMBR1-208ENST00000434278 FER1L4A9Z1Z3 1794 aa32.04■■■□□ 2.72
LMBR1-208ENST00000434278 LRRC9Q6ZRR7 1453 aa32.03■■■□□ 2.72
LMBR1-208ENST00000434278 SPAG9O60271 1321 aaKnown RBP32.01■■■□□ 2.72
LMBR1-208ENST00000434278 MAP3K1Q13233 1512 aa31.99■■■□□ 2.71
LMBR1-208ENST00000434278 PLPPR3Q6T4P5 718 aa31.98■■■□□ 2.71
LMBR1-208ENST00000434278 AGLP35573 1532 aa31.98■■■□□ 2.71
LMBR1-208ENST00000434278 KANK4Q5T7N3 995 aaPredicted RBP31.97■■■□□ 2.71
LMBR1-208ENST00000434278 MBD5Q9P267 1494 aa31.97■■■□□ 2.71
LMBR1-208ENST00000434278 ATP7AQ04656 1500 aa31.96■■■□□ 2.71
LMBR1-208ENST00000434278 INO80Q9ULG1 1556 aaPredicted RBP31.95■■■□□ 2.71
LMBR1-208ENST00000434278 CAMSAP2Q08AD1 1489 aa31.9■■■□□ 2.7
LMBR1-208ENST00000434278 LMTK3Q96Q04 1460 aa31.88■■■□□ 2.69
LMBR1-208ENST00000434278 CEBPAP49715 358 aaPredicted RBP31.86■■■□□ 2.69
LMBR1-208ENST00000434278 A2MP01023 1474 aa31.84■■■□□ 2.69
LMBR1-208ENST00000434278 PLXNC1O60486 1568 aa31.83■■■□□ 2.69
LMBR1-208ENST00000434278 CCDC141Q6ZP82 1450 aa31.81■■■□□ 2.68
LMBR1-208ENST00000434278 RTEL1-TNFRSF6BF6WH68 1400 aa31.81■■■□□ 2.68
LMBR1-208ENST00000434278 APLP2Q06481 763 aa31.79■■■□□ 2.68
LMBR1-208ENST00000434278 ADGBQ8N7X0 1667 aa31.78■■■□□ 2.68
LMBR1-208ENST00000434278 RSPH4AQ5TD94 716 aa31.77■■■□□ 2.68
LMBR1-208ENST00000434278 MYOM3Q5VTT5 1437 aa31.76■■■□□ 2.68
LMBR1-208ENST00000434278 ESF1Q9H501 851 aaKnown RBP31.76■■■□□ 2.67
LMBR1-208ENST00000434278 ARHGEF5Q12774 1597 aa31.76■■■□□ 2.67
LMBR1-208ENST00000434278 C3P01024 1663 aa31.74■■■□□ 2.67
LMBR1-208ENST00000434278 HSPA2P54652 639 aa31.73■■■□□ 2.67
LMBR1-208ENST00000434278 MIA2Q96PC5 1412 aa31.72■■■□□ 2.67
LMBR1-208ENST00000434278 CNTLNQ9NXG0 1405 aa31.71■■■□□ 2.67
LMBR1-208ENST00000434278 PREX1Q8TCU6 1659 aa31.69■■■□□ 2.66
LMBR1-208ENST00000434278 DHX29Q7Z478 1369 aaKnown RBP31.68■■■□□ 2.66
LMBR1-208ENST00000434278 GGT6Q6P531 493 aa31.67■■■□□ 2.66
LMBR1-208ENST00000434278 TSPY4P0CV99 314 aa31.66■■■□□ 2.66
LMBR1-208ENST00000434278 TSPY10P0CW01 314 aa31.66■■■□□ 2.66
LMBR1-208ENST00000434278 MROH2AA6NES4 1674 aa31.64■■■□□ 2.65
LMBR1-208ENST00000434278 CLTCQ00610 1675 aaKnown RBP31.63■■■□□ 2.65
LMBR1-208ENST00000434278 SETD1BQ9UPS6 1966 aaKnown RBP31.61■■■□□ 2.65
LMBR1-208ENST00000434278 ZMYM3Q14202 1370 aa31.61■■■□□ 2.65
LMBR1-208ENST00000434278 MAST1Q9Y2H9 1570 aa31.6■■■□□ 2.65
LMBR1-208ENST00000434278 UHRF1BP1Q6BDS2 1440 aa31.58■■■□□ 2.65
LMBR1-208ENST00000434278 KIF3BO15066 747 aa31.57■■■□□ 2.64
LMBR1-208ENST00000434278 PPP6R1Q9UPN7 881 aa31.56■■■□□ 2.64
LMBR1-208ENST00000434278 PTPN23Q9H3S7 1636 aa31.56■■■□□ 2.64
LMBR1-208ENST00000434278 FGD6Q6ZV73 1430 aa31.53■■■□□ 2.64
LMBR1-208ENST00000434278 NPATQ14207 1427 aa31.51■■■□□ 2.64
LMBR1-208ENST00000434278 TCOF1Q13428 1488 aaKnown RBP31.49■■■□□ 2.63
LMBR1-208ENST00000434278 ABCC5O15440 1437 aa31.49■■■□□ 2.63
LMBR1-208ENST00000434278 PTPRKQ15262 1439 aa31.47■■■□□ 2.63
LMBR1-208ENST00000434278 CROCC2H7BZ55 1655 aa31.45■■■□□ 2.63
LMBR1-208ENST00000434278 DAPK1P53355 1430 aa31.43■■■□□ 2.62
LMBR1-208ENST00000434278 SHANK2Q9UPX8 1470 aa31.43■■■□□ 2.62
LMBR1-208ENST00000434278 DNMT1P26358 1616 aaKnown RBP31.42■■■□□ 2.62
LMBR1-208ENST00000434278 KDM5DQ9BY66 1539 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms