RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 PREX2Q70Z35 1606 aa21.08■□□□□ 0.97
TRAPPC4-202ENST00000434101 SCAPERQ9BY12 1400 aa21.07■□□□□ 0.96
TRAPPC4-202ENST00000434101 ZMYM4Q5VZL5 1548 aa21.06■□□□□ 0.96
TRAPPC4-202ENST00000434101 CDC42BPAQ5VT25 1732 aa21.06■□□□□ 0.96
TRAPPC4-202ENST00000434101 MTUS2Q5JR59 1369 aa21.05■□□□□ 0.96
TRAPPC4-202ENST00000434101 POGZQ7Z3K3 1410 aa21.04■□□□□ 0.96
TRAPPC4-202ENST00000434101 ARHGEF40Q8TER5 1519 aa21.04■□□□□ 0.96
TRAPPC4-202ENST00000434101 MAGI2Q86UL8 1455 aa21.02■□□□□ 0.96
TRAPPC4-202ENST00000434101 EHBP1L1Q8N3D4 1523 aa21.01■□□□□ 0.95
TRAPPC4-202ENST00000434101 VPS8Q8N3P4 1428 aa21.01■□□□□ 0.95
TRAPPC4-202ENST00000434101 ZFYVE16Q7Z3T8 1539 aa21■□□□□ 0.95
TRAPPC4-202ENST00000434101 ZNF518AQ6AHZ1 1483 aa20.99■□□□□ 0.95
TRAPPC4-202ENST00000434101 ABCC1P33527 1531 aa20.96■□□□□ 0.95
TRAPPC4-202ENST00000434101 GPATCH8Q9UKJ3 1502 aaKnown RBP20.96■□□□□ 0.95
TRAPPC4-202ENST00000434101 CCNB3Q8WWL7 1395 aa20.96■□□□□ 0.95
TRAPPC4-202ENST00000434101 ITSN2Q9NZM3 1697 aa20.96■□□□□ 0.95
TRAPPC4-202ENST00000434101 KDM5CP41229 1560 aa20.94■□□□□ 0.94
TRAPPC4-202ENST00000434101 TIAM1Q13009 1591 aa20.94■□□□□ 0.94
TRAPPC4-202ENST00000434101 ARID4BQ4LE39 1312 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC4-202ENST00000434101 YEATS2Q9ULM3 1422 aa20.94■□□□□ 0.94
TRAPPC4-202ENST00000434101 BCORL1Q5H9F3 1711 aa20.92■□□□□ 0.94
TRAPPC4-202ENST00000434101 SUPT6HQ7KZ85 1726 aaKnown RBP20.92■□□□□ 0.94
TRAPPC4-202ENST00000434101 ADAMTSL3P82987 1691 aa20.91■□□□□ 0.94
TRAPPC4-202ENST00000434101 HECW2Q9P2P5 1572 aa20.91■□□□□ 0.94
TRAPPC4-202ENST00000434101 CFDP1Q9UEE9 299 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC4-202ENST00000434101 SAMD9LQ8IVG5 1584 aa20.9■□□□□ 0.94
TRAPPC4-202ENST00000434101 AFAP1Q8N556 730 aa20.9■□□□□ 0.94
TRAPPC4-202ENST00000434101 ZNF777Q9ULD5 760 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC4-202ENST00000434101 PLEKHH2Q8IVE3 1493 aa20.89■□□□□ 0.94
TRAPPC4-202ENST00000434101 MYT1LQ9UL68 1186 aa20.89■□□□□ 0.93
TRAPPC4-202ENST00000434101 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
TRAPPC4-202ENST00000434101 ATP10AO60312 1499 aa20.88■□□□□ 0.93
TRAPPC4-202ENST00000434101 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
TRAPPC4-202ENST00000434101 TRAPPC8Q9Y2L5 1435 aa20.87■□□□□ 0.93
TRAPPC4-202ENST00000434101 MLH3Q9UHC1 1453 aa20.87■□□□□ 0.93
TRAPPC4-202ENST00000434101 C9orf84Q5VXU9 1444 aa20.87■□□□□ 0.93
TRAPPC4-202ENST00000434101 SYCP2Q9BX26 1530 aa20.86■□□□□ 0.93
TRAPPC4-202ENST00000434101 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
TRAPPC4-202ENST00000434101 KIAA1107Q9UPP5 1409 aa20.85■□□□□ 0.93
TRAPPC4-202ENST00000434101 LRRC9Q6ZRR7 1453 aa20.84■□□□□ 0.93
TRAPPC4-202ENST00000434101 SIGLEC1Q9BZZ2 1709 aa20.84■□□□□ 0.93
TRAPPC4-202ENST00000434101 MADDQ8WXG6 1647 aa20.83■□□□□ 0.93
TRAPPC4-202ENST00000434101 DIP2CQ9Y2E4 1556 aa20.83■□□□□ 0.92
TRAPPC4-202ENST00000434101 APLP2Q06481 763 aa20.81■□□□□ 0.92
TRAPPC4-202ENST00000434101 KIDINS220Q9ULH0 1771 aa20.81■□□□□ 0.92
TRAPPC4-202ENST00000434101 ABCA6Q8N139 1617 aa20.81■□□□□ 0.92
TRAPPC4-202ENST00000434101 REREQ9P2R6 1566 aa20.8■□□□□ 0.92
TRAPPC4-202ENST00000434101 HNRNPMP52272 730 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRAPPC4-202ENST00000434101 PTPRMP28827 1452 aa20.8■□□□□ 0.92
TRAPPC4-202ENST00000434101 RIMS1Q86UR5 1692 aaKnown RBP20.79■□□□□ 0.92
TRAPPC4-202ENST00000434101 SPAG9O60271 1321 aaKnown RBP20.78■□□□□ 0.92
TRAPPC4-202ENST00000434101 FER1L4A9Z1Z3 1794 aa20.77■□□□□ 0.92
TRAPPC4-202ENST00000434101 MLECQ14165 292 aa20.75■□□□□ 0.91
TRAPPC4-202ENST00000434101 ATP7AQ04656 1500 aa20.74■□□□□ 0.91
TRAPPC4-202ENST00000434101 KANK4Q5T7N3 995 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC4-202ENST00000434101 ZNF644Q9H582 1327 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC4-202ENST00000434101 INO80Q9ULG1 1556 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC4-202ENST00000434101 CAMSAP2Q08AD1 1489 aa20.73■□□□□ 0.91
TRAPPC4-202ENST00000434101 AGLP35573 1532 aa20.73■□□□□ 0.91
TRAPPC4-202ENST00000434101 MBD5Q9P267 1494 aa20.72■□□□□ 0.91
TRAPPC4-202ENST00000434101 RSPH4AQ5TD94 716 aa20.69■□□□□ 0.9
TRAPPC4-202ENST00000434101 ADGBQ8N7X0 1667 aa20.68■□□□□ 0.9
TRAPPC4-202ENST00000434101 CCDC141Q6ZP82 1450 aa20.68■□□□□ 0.9
TRAPPC4-202ENST00000434101 RTEL1-TNFRSF6BF6WH68 1400 aa20.67■□□□□ 0.9
TRAPPC4-202ENST00000434101 MYOM3Q5VTT5 1437 aa20.67■□□□□ 0.9
TRAPPC4-202ENST00000434101 MIA2Q96PC5 1412 aa20.66■□□□□ 0.9
TRAPPC4-202ENST00000434101 ARHGEF5Q12774 1597 aa20.66■□□□□ 0.9
TRAPPC4-202ENST00000434101 A2MP01023 1474 aa20.64■□□□□ 0.89
TRAPPC4-202ENST00000434101 PLXNC1O60486 1568 aa20.63■□□□□ 0.89
TRAPPC4-202ENST00000434101 ESF1Q9H501 851 aaKnown RBP20.62■□□□□ 0.89
TRAPPC4-202ENST00000434101 PLPPR3Q6T4P5 718 aa20.61■□□□□ 0.89
TRAPPC4-202ENST00000434101 TSPY4P0CV99 314 aa20.6■□□□□ 0.89
TRAPPC4-202ENST00000434101 TSPY10P0CW01 314 aa20.6■□□□□ 0.89
TRAPPC4-202ENST00000434101 SETD1BQ9UPS6 1966 aaKnown RBP20.59■□□□□ 0.89
TRAPPC4-202ENST00000434101 CNTLNQ9NXG0 1405 aa20.58■□□□□ 0.88
TRAPPC4-202ENST00000434101 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
TRAPPC4-202ENST00000434101 MAST1Q9Y2H9 1570 aa20.55■□□□□ 0.88
TRAPPC4-202ENST00000434101 DHX29Q7Z478 1369 aaKnown RBP20.55■□□□□ 0.88
TRAPPC4-202ENST00000434101 MROH2AA6NES4 1674 aa20.54■□□□□ 0.88
TRAPPC4-202ENST00000434101 C3P01024 1663 aa20.54■□□□□ 0.88
TRAPPC4-202ENST00000434101 LMTK3Q96Q04 1460 aa20.54■□□□□ 0.88
TRAPPC4-202ENST00000434101 FGD6Q6ZV73 1430 aa20.53■□□□□ 0.88
TRAPPC4-202ENST00000434101 PREX1Q8TCU6 1659 aa20.52■□□□□ 0.88
TRAPPC4-202ENST00000434101 CEBPAP49715 358 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC4-202ENST00000434101 PPP6R1Q9UPN7 881 aa20.51■□□□□ 0.87
TRAPPC4-202ENST00000434101 GGT6Q6P531 493 aa20.5■□□□□ 0.87
TRAPPC4-202ENST00000434101 CLTCQ00610 1675 aaKnown RBP20.5■□□□□ 0.87
TRAPPC4-202ENST00000434101 TCOF1Q13428 1488 aaKnown RBP20.5■□□□□ 0.87
TRAPPC4-202ENST00000434101 CROCC2H7BZ55 1655 aa20.49■□□□□ 0.87
TRAPPC4-202ENST00000434101 SHANK2Q9UPX8 1470 aa20.47■□□□□ 0.87
TRAPPC4-202ENST00000434101 DNMT1P26358 1616 aaKnown RBP20.46■□□□□ 0.87
TRAPPC4-202ENST00000434101 KIF3BO15066 747 aa20.46■□□□□ 0.87
TRAPPC4-202ENST00000434101 ZMYM3Q14202 1370 aa20.45■□□□□ 0.86
TRAPPC4-202ENST00000434101 UHRF1BP1Q6BDS2 1440 aa20.44■□□□□ 0.86
TRAPPC4-202ENST00000434101 FAM135AQ9P2D6 1515 aa20.44■□□□□ 0.86
TRAPPC4-202ENST00000434101 ABCC5O15440 1437 aa20.44■□□□□ 0.86
TRAPPC4-202ENST00000434101 DAPK1P53355 1430 aa20.44■□□□□ 0.86
TRAPPC4-202ENST00000434101 EIF2AK4Q9P2K8 1649 aaKnown RBP20.43■□□□□ 0.86
TRAPPC4-202ENST00000434101 NPATQ14207 1427 aa20.42■□□□□ 0.86
TRAPPC4-202ENST00000434101 HSPA2P54652 639 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms