RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 ADGRL1O94910 1474 aa30.1■■■□□ 2.41
RPUSD3-207ENST00000433555 SUPT6HQ7KZ85 1726 aaKnown RBP30.08■■■□□ 2.41
RPUSD3-207ENST00000433555 DENND4BO75064 1496 aaPredicted RBP30.07■■■□□ 2.4
RPUSD3-207ENST00000433555 MAP3K1Q13233 1512 aa30.06■■■□□ 2.4
RPUSD3-207ENST00000433555 ABCC1P33527 1531 aa30.06■■■□□ 2.4
RPUSD3-207ENST00000433555 GPATCH8Q9UKJ3 1502 aaKnown RBP30.06■■■□□ 2.4
RPUSD3-207ENST00000433555 ITSN2Q9NZM3 1697 aa30.05■■■□□ 2.4
RPUSD3-207ENST00000433555 RAPGEF3O95398 923 aa30.05■■■□□ 2.4
RPUSD3-207ENST00000433555 SAMD9LQ8IVG5 1584 aa30.04■■■□□ 2.4
RPUSD3-207ENST00000433555 ZMYM4Q5VZL5 1548 aa30.04■■■□□ 2.4
RPUSD3-207ENST00000433555 LRRC9Q6ZRR7 1453 aa30.04■■■□□ 2.4
RPUSD3-207ENST00000433555 POGZQ7Z3K3 1410 aa30.03■■■□□ 2.4
RPUSD3-207ENST00000433555 SCAPERQ9BY12 1400 aa30.01■■■□□ 2.39
RPUSD3-207ENST00000433555 ARHGEF40Q8TER5 1519 aa30.01■■■□□ 2.39
RPUSD3-207ENST00000433555 NCOA2Q15596 1464 aa30■■■□□ 2.39
RPUSD3-207ENST00000433555 EFCAB2Q5VUJ9 269 aa29.99■■■□□ 2.39
RPUSD3-207ENST00000433555 ARHGEF12Q9NZN5 1544 aa29.97■■■□□ 2.39
RPUSD3-207ENST00000433555 KDM5CP41229 1560 aa29.95■■■□□ 2.39
RPUSD3-207ENST00000433555 CCNB3Q8WWL7 1395 aa29.95■■■□□ 2.39
RPUSD3-207ENST00000433555 SYCP2Q9BX26 1530 aa29.93■■■□□ 2.38
RPUSD3-207ENST00000433555 KANK4Q5T7N3 995 aaPredicted RBP29.92■■■□□ 2.38
RPUSD3-207ENST00000433555 ZFYVE16Q7Z3T8 1539 aa29.91■■■□□ 2.38
RPUSD3-207ENST00000433555 SIGLEC1Q9BZZ2 1709 aa29.91■■■□□ 2.38
RPUSD3-207ENST00000433555 ZNF518AQ6AHZ1 1483 aa29.89■■■□□ 2.38
RPUSD3-207ENST00000433555 YEATS2Q9ULM3 1422 aa29.88■■■□□ 2.37
RPUSD3-207ENST00000433555 HECW2Q9P2P5 1572 aa29.88■■■□□ 2.37
RPUSD3-207ENST00000433555 TRAPPC8Q9Y2L5 1435 aa29.88■■■□□ 2.37
RPUSD3-207ENST00000433555 ABCA6Q8N139 1617 aa29.82■■■□□ 2.36
RPUSD3-207ENST00000433555 MAGI2Q86UL8 1455 aa29.82■■■□□ 2.36
RPUSD3-207ENST00000433555 ZNF777Q9ULD5 760 aaPredicted RBP29.82■■■□□ 2.36
RPUSD3-207ENST00000433555 CFDP1Q9UEE9 299 aaPredicted RBP29.81■■■□□ 2.36
RPUSD3-207ENST00000433555 DIP2CQ9Y2E4 1556 aa29.8■■■□□ 2.36
RPUSD3-207ENST00000433555 KIDINS220Q9ULH0 1771 aa29.8■■■□□ 2.36
RPUSD3-207ENST00000433555 CAMSAP2Q08AD1 1489 aa29.79■■■□□ 2.36
RPUSD3-207ENST00000433555 KDM4FA0A1W2PPD8 638 aa29.78■■■□□ 2.36
RPUSD3-207ENST00000433555 AFAP1Q8N556 730 aa29.78■■■□□ 2.36
RPUSD3-207ENST00000433555 PLEKHH2Q8IVE3 1493 aa29.78■■■□□ 2.36
RPUSD3-207ENST00000433555 ZNF644Q9H582 1327 aaPredicted RBP29.76■■■□□ 2.36
RPUSD3-207ENST00000433555 KIAA1107Q9UPP5 1409 aa29.76■■■□□ 2.35
RPUSD3-207ENST00000433555 INO80Q9ULG1 1556 aaPredicted RBP29.76■■■□□ 2.35
RPUSD3-207ENST00000433555 BCORL1Q5H9F3 1711 aa29.75■■■□□ 2.35
RPUSD3-207ENST00000433555 MLH3Q9UHC1 1453 aa29.74■■■□□ 2.35
RPUSD3-207ENST00000433555 MBD5Q9P267 1494 aa29.73■■■□□ 2.35
RPUSD3-207ENST00000433555 MYOM3Q5VTT5 1437 aa29.72■■■□□ 2.35
RPUSD3-207ENST00000433555 APLP2Q06481 763 aa29.72■■■□□ 2.35
RPUSD3-207ENST00000433555 HNRNPMP52272 730 aaKnown RBP eCLIP29.71■■■□□ 2.35
RPUSD3-207ENST00000433555 ADAMTSL3P82987 1691 aa29.71■■■□□ 2.35
RPUSD3-207ENST00000433555 ATP7AQ04656 1500 aa29.68■■■□□ 2.34
RPUSD3-207ENST00000433555 C9orf84Q5VXU9 1444 aa29.68■■■□□ 2.34
RPUSD3-207ENST00000433555 ATP10AO60312 1499 aa29.68■■■□□ 2.34
RPUSD3-207ENST00000433555 REREQ9P2R6 1566 aa29.67■■■□□ 2.34
RPUSD3-207ENST00000433555 ARHGEF5Q12774 1597 aa29.65■■■□□ 2.34
RPUSD3-207ENST00000433555 MADDQ8WXG6 1647 aa29.64■■■□□ 2.34
RPUSD3-207ENST00000433555 PTPN23Q9H3S7 1636 aa29.63■■■□□ 2.33
RPUSD3-207ENST00000433555 MIA2Q96PC5 1412 aa29.62■■■□□ 2.33
RPUSD3-207ENST00000433555 CCDC141Q6ZP82 1450 aa29.62■■■□□ 2.33
RPUSD3-207ENST00000433555 ADGBQ8N7X0 1667 aa29.6■■■□□ 2.33
RPUSD3-207ENST00000433555 CROCC2H7BZ55 1655 aa29.57■■■□□ 2.32
RPUSD3-207ENST00000433555 RIMS1Q86UR5 1692 aaKnown RBP29.57■■■□□ 2.32
RPUSD3-207ENST00000433555 SPAG9O60271 1321 aaKnown RBP29.57■■■□□ 2.32
RPUSD3-207ENST00000433555 PLXNC1O60486 1568 aa29.56■■■□□ 2.32
RPUSD3-207ENST00000433555 FGD6Q6ZV73 1430 aa29.56■■■□□ 2.32
RPUSD3-207ENST00000433555 MYT1LQ9UL68 1186 aa29.56■■■□□ 2.32
RPUSD3-207ENST00000433555 FER1L4A9Z1Z3 1794 aa29.56■■■□□ 2.32
RPUSD3-207ENST00000433555 ARID4BQ4LE39 1312 aaPredicted RBP29.55■■■□□ 2.32
RPUSD3-207ENST00000433555 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
RPUSD3-207ENST00000433555 TCOF1Q13428 1488 aaKnown RBP29.54■■■□□ 2.32
RPUSD3-207ENST00000433555 AGLP35573 1532 aa29.52■■■□□ 2.32
RPUSD3-207ENST00000433555 MAST1Q9Y2H9 1570 aa29.52■■■□□ 2.32
RPUSD3-207ENST00000433555 DNMT1P26358 1616 aaKnown RBP29.49■■■□□ 2.31
RPUSD3-207ENST00000433555 RTEL1-TNFRSF6BF6WH68 1400 aa29.48■■■□□ 2.31
RPUSD3-207ENST00000433555 A2MP01023 1474 aa29.46■■■□□ 2.31
RPUSD3-207ENST00000433555 PTPRMP28827 1452 aa29.44■■■□□ 2.3
RPUSD3-207ENST00000433555 PPARGC1BQ86YN6 1023 aaKnown RBP29.43■■■□□ 2.3
RPUSD3-207ENST00000433555 MLECQ14165 292 aa29.42■■■□□ 2.3
RPUSD3-207ENST00000433555 ABCC5O15440 1437 aa29.4■■■□□ 2.3
RPUSD3-207ENST00000433555 SHANK2Q9UPX8 1470 aa29.39■■■□□ 2.3
RPUSD3-207ENST00000433555 DAPK1P53355 1430 aa29.38■■■□□ 2.29
RPUSD3-207ENST00000433555 RSPH4AQ5TD94 716 aa29.37■■■□□ 2.29
RPUSD3-207ENST00000433555 C3P01024 1663 aa29.3■■■□□ 2.28
RPUSD3-207ENST00000433555 DHX29Q7Z478 1369 aaKnown RBP29.29■■■□□ 2.28
RPUSD3-207ENST00000433555 CLTCQ00610 1675 aaKnown RBP29.29■■■□□ 2.28
RPUSD3-207ENST00000433555 TSPY4P0CV99 314 aa29.28■■■□□ 2.28
RPUSD3-207ENST00000433555 TSPY10P0CW01 314 aa29.28■■■□□ 2.28
RPUSD3-207ENST00000433555 MROH2AA6NES4 1674 aa29.27■■■□□ 2.28
RPUSD3-207ENST00000433555 EIF2AK4Q9P2K8 1649 aaKnown RBP29.27■■■□□ 2.28
RPUSD3-207ENST00000433555 RNF17Q9BXT8 1623 aaKnown RBP29.25■■■□□ 2.27
RPUSD3-207ENST00000433555 FAM50AQ14320 339 aaKnown RBP29.24■■■□□ 2.27
RPUSD3-207ENST00000433555 DUOX2Q9NRD8 1548 aa29.23■■■□□ 2.27
RPUSD3-207ENST00000433555 MROH1Q8NDA8 1641 aa29.22■■■□□ 2.27
RPUSD3-207ENST00000433555 ADGRL2O95490 1459 aa29.21■■■□□ 2.27
RPUSD3-207ENST00000433555 PTPRKQ15262 1439 aa29.2■■■□□ 2.26
RPUSD3-207ENST00000433555 KIF15Q9NS87 1388 aa29.19■■■□□ 2.26
RPUSD3-207ENST00000433555 PLPPR3Q6T4P5 718 aa29.18■■■□□ 2.26
RPUSD3-207ENST00000433555 CNTLNQ9NXG0 1405 aa29.16■■■□□ 2.26
RPUSD3-207ENST00000433555 RRBP1Q9P2E9 1410 aaKnown RBP29.16■■■□□ 2.26
RPUSD3-207ENST00000433555 CHIC2Q9UKJ5 165 aa29.14■■■□□ 2.26
RPUSD3-207ENST00000433555 PREX1Q8TCU6 1659 aa29.13■■■□□ 2.25
RPUSD3-207ENST00000433555 KIF3BO15066 747 aa29.13■■■□□ 2.25
RPUSD3-207ENST00000433555 CEBPAP49715 358 aaPredicted RBP29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms