RNA–Protein interactions for RNA: ENST00000433463.1

POLR2B-204, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-204ENST00000433463 LRRIQ1Q96JM4 1722 aa37.83■■■■□ 3.65
POLR2B-204ENST00000433463 BCORL1Q5H9F3 1711 aa37.82■■■■□ 3.65
POLR2B-204ENST00000433463 ZFYVE16Q7Z3T8 1539 aa37.82■■■■□ 3.64
POLR2B-204ENST00000433463 PTPRMP28827 1452 aa37.81■■■■□ 3.64
POLR2B-204ENST00000433463 PCF11O94913 1555 aaKnown RBP37.8■■■■□ 3.64
POLR2B-204ENST00000433463 POGZQ7Z3K3 1410 aa37.8■■■■□ 3.64
POLR2B-204ENST00000433463 ARHGAP5Q13017 1502 aa37.77■■■■□ 3.64
POLR2B-204ENST00000433463 YEATS2Q9ULM3 1422 aa37.76■■■■□ 3.63
POLR2B-204ENST00000433463 FYCO1Q9BQS8 1478 aa37.73■■■■□ 3.63
POLR2B-204ENST00000433463 MADDQ8WXG6 1647 aa37.71■■■■□ 3.63
POLR2B-204ENST00000433463 MYT1LQ9UL68 1186 aa37.67■■■■□ 3.62
POLR2B-204ENST00000433463 ZNF518AQ6AHZ1 1483 aa37.66■■■■□ 3.62
POLR2B-204ENST00000433463 MLECQ14165 292 aa37.64■■■■□ 3.62
POLR2B-204ENST00000433463 AFAP1Q8N556 730 aa37.64■■■■□ 3.62
POLR2B-204ENST00000433463 ATP10AO60312 1499 aa37.64■■■■□ 3.62
POLR2B-204ENST00000433463 CDC42BPBQ9Y5S2 1711 aa37.61■■■■□ 3.61
POLR2B-204ENST00000433463 RIMS1Q86UR5 1692 aaKnown RBP37.6■■■■□ 3.61
POLR2B-204ENST00000433463 C9orf84Q5VXU9 1444 aa37.58■■■■□ 3.61
POLR2B-204ENST00000433463 PREX2Q70Z35 1606 aa37.57■■■■□ 3.6
POLR2B-204ENST00000433463 PLPPR3Q6T4P5 718 aa37.55■■■■□ 3.6
POLR2B-204ENST00000433463 SIGLEC1Q9BZZ2 1709 aa37.53■■■■□ 3.6
POLR2B-204ENST00000433463 KDM5CP41229 1560 aa37.52■■■■□ 3.6
POLR2B-204ENST00000433463 ZNF777Q9ULD5 760 aaPredicted RBP37.49■■■■□ 3.59
POLR2B-204ENST00000433463 ABCC1P33527 1531 aa37.46■■■■□ 3.59
POLR2B-204ENST00000433463 CDC42BPAQ5VT25 1732 aa37.46■■■■□ 3.59
POLR2B-204ENST00000433463 MLH3Q9UHC1 1453 aa37.45■■■■□ 3.59
POLR2B-204ENST00000433463 TRAPPC8Q9Y2L5 1435 aa37.44■■■■□ 3.58
POLR2B-204ENST00000433463 MTUS2Q5JR59 1369 aa37.43■■■■□ 3.58
POLR2B-204ENST00000433463 FER1L4A9Z1Z3 1794 aa37.43■■■■□ 3.58
POLR2B-204ENST00000433463 ARHGEF12Q9NZN5 1544 aa37.42■■■■□ 3.58
POLR2B-204ENST00000433463 CEP162Q5TB80 1403 aa37.41■■■■□ 3.58
POLR2B-204ENST00000433463 ILDR1Q86SU0 546 aaPredicted RBP37.4■■■■□ 3.58
POLR2B-204ENST00000433463 ITSN2Q9NZM3 1697 aa37.4■■■■□ 3.58
POLR2B-204ENST00000433463 GPATCH8Q9UKJ3 1502 aaKnown RBP37.4■■■■□ 3.58
POLR2B-204ENST00000433463 CFDP1Q9UEE9 299 aaPredicted RBP37.38■■■■□ 3.57
POLR2B-204ENST00000433463 CCNB3Q8WWL7 1395 aa37.38■■■■□ 3.57
POLR2B-204ENST00000433463 LMTK3Q96Q04 1460 aa37.38■■■■□ 3.57
POLR2B-204ENST00000433463 DIP2CQ9Y2E4 1556 aa37.38■■■■□ 3.57
POLR2B-204ENST00000433463 REREQ9P2R6 1566 aa37.32■■■■□ 3.56
POLR2B-204ENST00000433463 HNRNPMP52272 730 aaKnown RBP eCLIP37.31■■■■□ 3.56
POLR2B-204ENST00000433463 ABCA6Q8N139 1617 aa37.31■■■■□ 3.56
POLR2B-204ENST00000433463 SAMD9LQ8IVG5 1584 aa37.29■■■■□ 3.56
POLR2B-204ENST00000433463 ESF1Q9H501 851 aaKnown RBP37.29■■■■□ 3.56
POLR2B-204ENST00000433463 PLEKHH2Q8IVE3 1493 aa37.28■■■■□ 3.56
POLR2B-204ENST00000433463 SPAG9O60271 1321 aaKnown RBP37.27■■■■□ 3.56
POLR2B-204ENST00000433463 HSPA2P54652 639 aa37.26■■■■□ 3.56
POLR2B-204ENST00000433463 SYCP2Q9BX26 1530 aa37.26■■■■□ 3.55
POLR2B-204ENST00000433463 CEBPAP49715 358 aaPredicted RBP37.25■■■■□ 3.55
POLR2B-204ENST00000433463 KIAA1107Q9UPP5 1409 aa37.25■■■■□ 3.55
POLR2B-204ENST00000433463 KIDINS220Q9ULH0 1771 aa37.24■■■■□ 3.55
POLR2B-204ENST00000433463 AGLP35573 1532 aa37.24■■■■□ 3.55
POLR2B-204ENST00000433463 EHBP1L1Q8N3D4 1523 aa37.22■■■■□ 3.55
POLR2B-204ENST00000433463 LOC105371045A0A1W2PR82 267 aa37.2■■■■□ 3.55
POLR2B-204ENST00000433463 TIAM1Q13009 1591 aa37.11■■■■□ 3.53
POLR2B-204ENST00000433463 SETD1BQ9UPS6 1966 aaKnown RBP37.1■■■■□ 3.53
POLR2B-204ENST00000433463 ATP7AQ04656 1500 aa37.1■■■■□ 3.53
POLR2B-204ENST00000433463 ZNF644Q9H582 1327 aaPredicted RBP37.1■■■■□ 3.53
POLR2B-204ENST00000433463 PREX1Q8TCU6 1659 aa37.09■■■■□ 3.53
POLR2B-204ENST00000433463 CNTLNQ9NXG0 1405 aa37.07■■■■□ 3.52
POLR2B-204ENST00000433463 UHRF1BP1Q6BDS2 1440 aa37.04■■■■□ 3.52
POLR2B-204ENST00000433463 VPS8Q8N3P4 1428 aa37.02■■■■□ 3.52
POLR2B-204ENST00000433463 SUPT6HQ7KZ85 1726 aaKnown RBP37.02■■■■□ 3.52
POLR2B-204ENST00000433463 INO80Q9ULG1 1556 aaPredicted RBP37.02■■■■□ 3.52
POLR2B-204ENST00000433463 A2MP01023 1474 aa37.01■■■■□ 3.52
POLR2B-204ENST00000433463 FBXO41Q8TF61 875 aa37.01■■■■□ 3.52
POLR2B-204ENST00000433463 C3P01024 1663 aa37.01■■■■□ 3.52
POLR2B-204ENST00000433463 NCOA2Q15596 1464 aa37.01■■■■□ 3.51
POLR2B-204ENST00000433463 MBD5Q9P267 1494 aa36.97■■■■□ 3.51
POLR2B-204ENST00000433463 RSPH4AQ5TD94 716 aa36.95■■■■□ 3.51
POLR2B-204ENST00000433463 GGT6Q6P531 493 aa36.93■■■■□ 3.5
POLR2B-204ENST00000433463 DMRT2Q9Y5R5 561 aa36.93■■■■□ 3.5
POLR2B-204ENST00000433463 RTEL1-TNFRSF6BF6WH68 1400 aa36.93■■■■□ 3.5
POLR2B-204ENST00000433463 PLXNC1O60486 1568 aa36.91■■■■□ 3.5
POLR2B-204ENST00000433463 ZMYM3Q14202 1370 aa36.91■■■■□ 3.5
POLR2B-204ENST00000433463 ADGBQ8N7X0 1667 aa36.9■■■■□ 3.5
POLR2B-204ENST00000433463 PPP6R1Q9UPN7 881 aa36.88■■■■□ 3.49
POLR2B-204ENST00000433463 LRRC9Q6ZRR7 1453 aa36.88■■■■□ 3.49
POLR2B-204ENST00000433463 CAMSAP2Q08AD1 1489 aa36.87■■■■□ 3.49
POLR2B-204ENST00000433463 MROH2AA6NES4 1674 aa36.86■■■■□ 3.49
POLR2B-204ENST00000433463 CCDC141Q6ZP82 1450 aa36.86■■■■□ 3.49
POLR2B-204ENST00000433463 NPATQ14207 1427 aa36.84■■■■□ 3.49
POLR2B-204ENST00000433463 DHX29Q7Z478 1369 aaKnown RBP36.82■■■■□ 3.49
POLR2B-204ENST00000433463 TSPY4P0CV99 314 aa36.82■■■■□ 3.48
POLR2B-204ENST00000433463 TSPY10P0CW01 314 aa36.82■■■■□ 3.48
POLR2B-204ENST00000433463 MAP3K1Q13233 1512 aa36.8■■■■□ 3.48
POLR2B-204ENST00000433463 CLTCQ00610 1675 aaKnown RBP36.79■■■■□ 3.48
POLR2B-204ENST00000433463 KANK4Q5T7N3 995 aaPredicted RBP36.78■■■■□ 3.48
POLR2B-204ENST00000433463 APLP2Q06481 763 aa36.77■■■■□ 3.48
POLR2B-204ENST00000433463 CERKQ8TCT0 537 aa36.77■■■■□ 3.48
POLR2B-204ENST00000433463 STRCQ7RTU9 1775 aa36.76■■■■□ 3.47
POLR2B-204ENST00000433463 KIF3BO15066 747 aa36.74■■■■□ 3.47
POLR2B-204ENST00000433463 ARHGEF5Q12774 1597 aa36.72■■■■□ 3.47
POLR2B-204ENST00000433463 PTPRTO14522 1441 aa36.67■■■■□ 3.46
POLR2B-204ENST00000433463 PTPRKQ15262 1439 aa36.67■■■■□ 3.46
POLR2B-204ENST00000433463 MIA2Q96PC5 1412 aa36.65■■■■□ 3.46
POLR2B-204ENST00000433463 MYOM3Q5VTT5 1437 aa36.64■■■■□ 3.46
POLR2B-204ENST00000433463 NCOA1Q15788 1441 aa36.62■■■■□ 3.45
POLR2B-204ENST00000433463 WASHC2CQ9Y4E1 1318 aa36.6■■■■□ 3.45
POLR2B-204ENST00000433463 CAMSAP1Q5T5Y3 1602 aa36.59■■■■□ 3.45
POLR2B-204ENST00000433463 MYO3AQ8NEV4 1616 aa36.55■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms