RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
NEFM-202ENST00000433454 MYO5CQ9NQX4 1742 aa15.76■□□□□ 0.11
NEFM-202ENST00000433454 CDC42BPBQ9Y5S2 1711 aa15.75■□□□□ 0.11
NEFM-202ENST00000433454 HFM1A2PYH4 1435 aa15.75■□□□□ 0.11
NEFM-202ENST00000433454 DAPK1P53355 1430 aa15.75■□□□□ 0.11
NEFM-202ENST00000433454 KCNH8Q96L42 1107 aa15.74■□□□□ 0.11
NEFM-202ENST00000433454 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
NEFM-202ENST00000433454 ZNF777Q9ULD5 760 aaPredicted RBP15.73■□□□□ 0.11
NEFM-202ENST00000433454 ASXL2Q76L83 1435 aa15.73■□□□□ 0.11
NEFM-202ENST00000433454 AKNAQ7Z591 1439 aa15.73■□□□□ 0.11
NEFM-202ENST00000433454 ABCC5O15440 1437 aa15.72■□□□□ 0.11
NEFM-202ENST00000433454 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
NEFM-202ENST00000433454 CROCC2H7BZ55 1655 aa15.71■□□□□ 0.11
NEFM-202ENST00000433454 GCC2Q8IWJ2 1684 aa15.71■□□□□ 0.1
NEFM-202ENST00000433454 NAIPQ13075 1403 aa15.7■□□□□ 0.1
NEFM-202ENST00000433454 SAMD9LQ8IVG5 1584 aa15.7■□□□□ 0.1
NEFM-202ENST00000433454 DHX57Q6P158 1386 aaKnown RBP15.69■□□□□ 0.1
NEFM-202ENST00000433454 ROCK1Q13464 1354 aa15.69■□□□□ 0.1
NEFM-202ENST00000433454 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
NEFM-202ENST00000433454 PLCH2O75038 1416 aa15.68■□□□□ 0.1
NEFM-202ENST00000433454 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
NEFM-202ENST00000433454 ARHGEF5Q12774 1597 aa15.68■□□□□ 0.1
NEFM-202ENST00000433454 ARAP3Q8WWN8 1544 aa15.67■□□□□ 0.1
NEFM-202ENST00000433454 ADGBQ8N7X0 1667 aa15.67■□□□□ 0.1
NEFM-202ENST00000433454 SHANK2Q9UPX8 1470 aa15.67■□□□□ 0.1
NEFM-202ENST00000433454 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
NEFM-202ENST00000433454 PLEKHH2Q8IVE3 1493 aa15.66■□□□□ 0.1
NEFM-202ENST00000433454 RRP7BPQ9NSQ0 103 aa15.65■□□□□ 0.1
NEFM-202ENST00000433454 CLSPNQ9HAW4 1339 aa15.65■□□□□ 0.1
NEFM-202ENST00000433454 ADGRL2O95490 1459 aa15.64■□□□□ 0.09
NEFM-202ENST00000433454 MBD5Q9P267 1494 aa15.64■□□□□ 0.09
NEFM-202ENST00000433454 SYCP2Q9BX26 1530 aa15.64■□□□□ 0.09
NEFM-202ENST00000433454 CCDC141Q6ZP82 1450 aa15.63■□□□□ 0.09
NEFM-202ENST00000433454 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
NEFM-202ENST00000433454 KIAA1107Q9UPP5 1409 aa15.63■□□□□ 0.09
NEFM-202ENST00000433454 EFCAB2Q5VUJ9 269 aa15.62■□□□□ 0.09
NEFM-202ENST00000433454 C9orf84Q5VXU9 1444 aa15.62■□□□□ 0.09
NEFM-202ENST00000433454 RSPH4AQ5TD94 716 aa15.61■□□□□ 0.09
NEFM-202ENST00000433454 NCOA1Q15788 1441 aa15.61■□□□□ 0.09
NEFM-202ENST00000433454 ABCC1P33527 1531 aa15.6■□□□□ 0.09
NEFM-202ENST00000433454 HNRNPMP52272 730 aaKnown RBP eCLIP15.6■□□□□ 0.09
NEFM-202ENST00000433454 ANKRD30AQ9BXX3 1397 aa15.6■□□□□ 0.09
NEFM-202ENST00000433454 TSPY4P0CV99 314 aa15.59■□□□□ 0.09
NEFM-202ENST00000433454 TSPY10P0CW01 314 aa15.59■□□□□ 0.09
NEFM-202ENST00000433454 FANCAO15360 1455 aa15.58■□□□□ 0.09
NEFM-202ENST00000433454 KDM6BO15054 1643 aa15.58■□□□□ 0.08
NEFM-202ENST00000433454 MAST1Q9Y2H9 1570 aa15.57■□□□□ 0.08
NEFM-202ENST00000433454 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
NEFM-202ENST00000433454 ARHGEF12Q9NZN5 1544 aa15.56■□□□□ 0.08
NEFM-202ENST00000433454 CD109Q6YHK3 1445 aa15.54■□□□□ 0.08
NEFM-202ENST00000433454 CFAP74Q9C0B2 1584 aa15.54■□□□□ 0.08
NEFM-202ENST00000433454 KIF15Q9NS87 1388 aa15.52■□□□□ 0.08
NEFM-202ENST00000433454 ADGRL1O94910 1474 aa15.52■□□□□ 0.07
NEFM-202ENST00000433454 PLXNC1O60486 1568 aa15.52■□□□□ 0.07
NEFM-202ENST00000433454 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
NEFM-202ENST00000433454 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
NEFM-202ENST00000433454 GLI2P10070 1586 aa15.5■□□□□ 0.07
NEFM-202ENST00000433454 TRIM52Q96A61 297 aa15.5■□□□□ 0.07
NEFM-202ENST00000433454 MAP3K4Q9Y6R4 1608 aa15.49■□□□□ 0.07
NEFM-202ENST00000433454 DIP2BQ9P265 1576 aa15.48■□□□□ 0.07
NEFM-202ENST00000433454 SCAPERQ9BY12 1400 aa15.47■□□□□ 0.07
NEFM-202ENST00000433454 ZFYVE16Q7Z3T8 1539 aa15.46■□□□□ 0.07
NEFM-202ENST00000433454 RTEL1-TNFRSF6BF6WH68 1400 aa15.46■□□□□ 0.06
NEFM-202ENST00000433454 NEO1Q92859 1461 aa15.46■□□□□ 0.06
NEFM-202ENST00000433454 SPAG9O60271 1321 aaKnown RBP15.45■□□□□ 0.06
NEFM-202ENST00000433454 INO80Q9ULG1 1556 aaPredicted RBP15.44■□□□□ 0.06
NEFM-202ENST00000433454 DUOX2Q9NRD8 1548 aa15.44■□□□□ 0.06
NEFM-202ENST00000433454 AFAP1Q8N556 730 aa15.44■□□□□ 0.06
NEFM-202ENST00000433454 ZNF518AQ6AHZ1 1483 aa15.43■□□□□ 0.06
NEFM-202ENST00000433454 MPHOSPH9Q99550 1183 aa15.43■□□□□ 0.06
NEFM-202ENST00000433454 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
NEFM-202ENST00000433454 DENND4BO75064 1496 aaPredicted RBP15.43■□□□□ 0.06
NEFM-202ENST00000433454 ERBINQ96RT1 1412 aa15.42■□□□□ 0.06
NEFM-202ENST00000433454 PZPP20742 1482 aa15.41■□□□□ 0.06
NEFM-202ENST00000433454 FAM69CQ0P6D2 419 aa15.41■□□□□ 0.06
NEFM-202ENST00000433454 POGZQ7Z3K3 1410 aa15.41■□□□□ 0.06
NEFM-202ENST00000433454 KDM5DQ9BY66 1539 aa15.41■□□□□ 0.06
NEFM-202ENST00000433454 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
NEFM-202ENST00000433454 KDM5CP41229 1560 aa15.39■□□□□ 0.05
NEFM-202ENST00000433454 UNC13BO14795 1591 aa15.39■□□□□ 0.05
NEFM-202ENST00000433454 NUP155O75694 1391 aa15.38■□□□□ 0.05
NEFM-202ENST00000433454 SIN3AQ96ST3 1273 aa15.38■□□□□ 0.05
NEFM-202ENST00000433454 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
NEFM-202ENST00000433454 KIDINS220Q9ULH0 1771 aa15.36■□□□□ 0.05
NEFM-202ENST00000433454 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
NEFM-202ENST00000433454 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
NEFM-202ENST00000433454 TIMELESSQ9UNS1 1208 aa15.36■□□□□ 0.05
NEFM-202ENST00000433454 TEX14Q8IWB6 1497 aa15.36■□□□□ 0.05
NEFM-202ENST00000433454 MYT1LQ9UL68 1186 aa15.35■□□□□ 0.05
NEFM-202ENST00000433454 TSPOAP1O95153 1857 aa15.35■□□□□ 0.05
NEFM-202ENST00000433454 PPRC1Q5VV67 1664 aaKnown RBP15.35■□□□□ 0.05
NEFM-202ENST00000433454 MAGI2Q86UL8 1455 aa15.34■□□□□ 0.05
NEFM-202ENST00000433454 MLH3Q9UHC1 1453 aa15.34■□□□□ 0.05
NEFM-202ENST00000433454 FAM135AQ9P2D6 1515 aa15.34■□□□□ 0.05
NEFM-202ENST00000433454 RICTORQ6R327 1708 aa15.33■□□□□ 0.04
NEFM-202ENST00000433454 ANKRD30BQ9BXX2 1392 aa15.33■□□□□ 0.04
NEFM-202ENST00000433454 EIF2AK4Q9P2K8 1649 aaKnown RBP15.32■□□□□ 0.04
NEFM-202ENST00000433454 IQGAP3Q86VI3 1631 aa15.32■□□□□ 0.04
NEFM-202ENST00000433454 FOXD1Q16676 465 aa15.32■□□□□ 0.04
NEFM-202ENST00000433454 TONSLQ96HA7 1378 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms