RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-205ENST00000433369 CDC42BPAQ5VT25 1732 aa20.36■□□□□ 0.85
PTPN12-205ENST00000433369 PREX2Q70Z35 1606 aa20.35■□□□□ 0.85
PTPN12-205ENST00000433369 EFCAB2Q5VUJ9 269 aa20.35■□□□□ 0.85
PTPN12-205ENST00000433369 ZMYM4Q5VZL5 1548 aa20.35■□□□□ 0.85
PTPN12-205ENST00000433369 ARHGEF40Q8TER5 1519 aa20.35■□□□□ 0.85
PTPN12-205ENST00000433369 POGZQ7Z3K3 1410 aa20.34■□□□□ 0.85
PTPN12-205ENST00000433369 SIGLEC1Q9BZZ2 1709 aa20.33■□□□□ 0.84
PTPN12-205ENST00000433369 YEATS2Q9ULM3 1422 aa20.32■□□□□ 0.84
PTPN12-205ENST00000433369 ZFYVE16Q7Z3T8 1539 aa20.29■□□□□ 0.84
PTPN12-205ENST00000433369 ADAMTSL3P82987 1691 aa20.28■□□□□ 0.84
PTPN12-205ENST00000433369 ARHGEF12Q9NZN5 1544 aa20.27■□□□□ 0.84
PTPN12-205ENST00000433369 BCORL1Q5H9F3 1711 aa20.27■□□□□ 0.84
PTPN12-205ENST00000433369 ABCC1P33527 1531 aa20.26■□□□□ 0.83
PTPN12-205ENST00000433369 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
PTPN12-205ENST00000433369 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
PTPN12-205ENST00000433369 AFAP1Q8N556 730 aa20.25■□□□□ 0.83
PTPN12-205ENST00000433369 ITSN2Q9NZM3 1697 aa20.25■□□□□ 0.83
PTPN12-205ENST00000433369 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
PTPN12-205ENST00000433369 KDM5CP41229 1560 aa20.24■□□□□ 0.83
PTPN12-205ENST00000433369 SAMD9LQ8IVG5 1584 aa20.23■□□□□ 0.83
PTPN12-205ENST00000433369 TRAPPC8Q9Y2L5 1435 aa20.23■□□□□ 0.83
PTPN12-205ENST00000433369 ZNF518AQ6AHZ1 1483 aa20.23■□□□□ 0.83
PTPN12-205ENST00000433369 ARID4BQ4LE39 1312 aaPredicted RBP20.23■□□□□ 0.83
PTPN12-205ENST00000433369 VPS8Q8N3P4 1428 aa20.22■□□□□ 0.83
PTPN12-205ENST00000433369 EHBP1L1Q8N3D4 1523 aa20.22■□□□□ 0.83
PTPN12-205ENST00000433369 MADDQ8WXG6 1647 aa20.21■□□□□ 0.83
PTPN12-205ENST00000433369 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
PTPN12-205ENST00000433369 ZNF777Q9ULD5 760 aaPredicted RBP20.19■□□□□ 0.82
PTPN12-205ENST00000433369 HECW2Q9P2P5 1572 aa20.18■□□□□ 0.82
PTPN12-205ENST00000433369 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
PTPN12-205ENST00000433369 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
PTPN12-205ENST00000433369 ATP10AO60312 1499 aa20.17■□□□□ 0.82
PTPN12-205ENST00000433369 DIP2CQ9Y2E4 1556 aa20.17■□□□□ 0.82
PTPN12-205ENST00000433369 PTPRMP28827 1452 aa20.16■□□□□ 0.82
PTPN12-205ENST00000433369 ABCA6Q8N139 1617 aa20.16■□□□□ 0.82
PTPN12-205ENST00000433369 RIMS1Q86UR5 1692 aaKnown RBP20.15■□□□□ 0.82
PTPN12-205ENST00000433369 KIDINS220Q9ULH0 1771 aa20.15■□□□□ 0.82
PTPN12-205ENST00000433369 MLH3Q9UHC1 1453 aa20.14■□□□□ 0.81
PTPN12-205ENST00000433369 C9orf84Q5VXU9 1444 aa20.14■□□□□ 0.81
PTPN12-205ENST00000433369 CFDP1Q9UEE9 299 aaPredicted RBP20.14■□□□□ 0.81
PTPN12-205ENST00000433369 HNRNPMP52272 730 aaKnown RBP eCLIP20.13■□□□□ 0.81
PTPN12-205ENST00000433369 SUPT6HQ7KZ85 1726 aaKnown RBP20.13■□□□□ 0.81
PTPN12-205ENST00000433369 ZNF644Q9H582 1327 aaPredicted RBP20.12■□□□□ 0.81
PTPN12-205ENST00000433369 MLECQ14165 292 aa20.12■□□□□ 0.81
PTPN12-205ENST00000433369 NCOA2Q15596 1464 aa20.11■□□□□ 0.81
PTPN12-205ENST00000433369 MYT1LQ9UL68 1186 aa20.11■□□□□ 0.81
PTPN12-205ENST00000433369 LRRC9Q6ZRR7 1453 aa20.1■□□□□ 0.81
PTPN12-205ENST00000433369 FER1L4A9Z1Z3 1794 aa20.09■□□□□ 0.81
PTPN12-205ENST00000433369 KANK4Q5T7N3 995 aaPredicted RBP20.09■□□□□ 0.81
PTPN12-205ENST00000433369 KIAA1107Q9UPP5 1409 aa20.08■□□□□ 0.8
PTPN12-205ENST00000433369 REREQ9P2R6 1566 aa20.07■□□□□ 0.8
PTPN12-205ENST00000433369 PLEKHH2Q8IVE3 1493 aa20.06■□□□□ 0.8
PTPN12-205ENST00000433369 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
PTPN12-205ENST00000433369 MBD5Q9P267 1494 aa20.05■□□□□ 0.8
PTPN12-205ENST00000433369 INO80Q9ULG1 1556 aaPredicted RBP20.04■□□□□ 0.8
PTPN12-205ENST00000433369 SPAG9O60271 1321 aaKnown RBP20.03■□□□□ 0.8
PTPN12-205ENST00000433369 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
PTPN12-205ENST00000433369 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
PTPN12-205ENST00000433369 CAMSAP2Q08AD1 1489 aa20.01■□□□□ 0.79
PTPN12-205ENST00000433369 AGLP35573 1532 aa20.01■□□□□ 0.79
PTPN12-205ENST00000433369 PLXNC1O60486 1568 aa19.95■□□□□ 0.78
PTPN12-205ENST00000433369 LMTK3Q96Q04 1460 aa19.94■□□□□ 0.78
PTPN12-205ENST00000433369 CEBPAP49715 358 aaPredicted RBP19.94■□□□□ 0.78
PTPN12-205ENST00000433369 A2MP01023 1474 aa19.93■□□□□ 0.78
PTPN12-205ENST00000433369 CCDC141Q6ZP82 1450 aa19.93■□□□□ 0.78
PTPN12-205ENST00000433369 ADGBQ8N7X0 1667 aa19.93■□□□□ 0.78
PTPN12-205ENST00000433369 MYOM3Q5VTT5 1437 aa19.91■□□□□ 0.78
PTPN12-205ENST00000433369 ARHGEF5Q12774 1597 aa19.91■□□□□ 0.78
PTPN12-205ENST00000433369 C3P01024 1663 aa19.91■□□□□ 0.78
PTPN12-205ENST00000433369 RTEL1-TNFRSF6BF6WH68 1400 aa19.9■□□□□ 0.78
PTPN12-205ENST00000433369 APLP2Q06481 763 aa19.88■□□□□ 0.77
PTPN12-205ENST00000433369 MIA2Q96PC5 1412 aa19.86■□□□□ 0.77
PTPN12-205ENST00000433369 HSPA2P54652 639 aa19.85■□□□□ 0.77
PTPN12-205ENST00000433369 CLTCQ00610 1675 aaKnown RBP19.84■□□□□ 0.77
PTPN12-205ENST00000433369 PREX1Q8TCU6 1659 aa19.84■□□□□ 0.77
PTPN12-205ENST00000433369 SETD1BQ9UPS6 1966 aaKnown RBP19.83■□□□□ 0.77
PTPN12-205ENST00000433369 RSPH4AQ5TD94 716 aa19.83■□□□□ 0.77
PTPN12-205ENST00000433369 PTPN23Q9H3S7 1636 aa19.83■□□□□ 0.76
PTPN12-205ENST00000433369 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.76
PTPN12-205ENST00000433369 MROH2AA6NES4 1674 aa19.81■□□□□ 0.76
PTPN12-205ENST00000433369 GGT6Q6P531 493 aa19.81■□□□□ 0.76
PTPN12-205ENST00000433369 MAST1Q9Y2H9 1570 aa19.81■□□□□ 0.76
PTPN12-205ENST00000433369 CNTLNQ9NXG0 1405 aa19.8■□□□□ 0.76
PTPN12-205ENST00000433369 ESF1Q9H501 851 aaKnown RBP19.8■□□□□ 0.76
PTPN12-205ENST00000433369 TSPY4P0CV99 314 aa19.79■□□□□ 0.76
PTPN12-205ENST00000433369 TSPY10P0CW01 314 aa19.79■□□□□ 0.76
PTPN12-205ENST00000433369 FGD6Q6ZV73 1430 aa19.78■□□□□ 0.76
PTPN12-205ENST00000433369 ZMYM3Q14202 1370 aa19.78■□□□□ 0.76
PTPN12-205ENST00000433369 CROCC2H7BZ55 1655 aa19.77■□□□□ 0.76
PTPN12-205ENST00000433369 KIF3BO15066 747 aa19.76■□□□□ 0.75
PTPN12-205ENST00000433369 ABCC5O15440 1437 aa19.76■□□□□ 0.75
PTPN12-205ENST00000433369 TCOF1Q13428 1488 aaKnown RBP19.75■□□□□ 0.75
PTPN12-205ENST00000433369 UHRF1BP1Q6BDS2 1440 aa19.73■□□□□ 0.75
PTPN12-205ENST00000433369 DNMT1P26358 1616 aaKnown RBP19.73■□□□□ 0.75
PTPN12-205ENST00000433369 DAPK1P53355 1430 aa19.71■□□□□ 0.75
PTPN12-205ENST00000433369 STRCQ7RTU9 1775 aa19.71■□□□□ 0.75
PTPN12-205ENST00000433369 PTPRKQ15262 1439 aa19.7■□□□□ 0.74
PTPN12-205ENST00000433369 NPATQ14207 1427 aa19.69■□□□□ 0.74
PTPN12-205ENST00000433369 SHANK2Q9UPX8 1470 aa19.69■□□□□ 0.74
PTPN12-205ENST00000433369 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms