RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 ATP1B4Q9UN42 357 aaPredicted RBP11.26□□□□□ -0.61
CNKSR3-202ENST00000433165 SUPT16HQ9Y5B9 1047 aaKnown RBP11.26□□□□□ -0.61
CNKSR3-202ENST00000433165 TROQ12816 1431 aaPredicted RBP11.26□□□□□ -0.61
CNKSR3-202ENST00000433165 PCF11O94913 1555 aaKnown RBP11.26□□□□□ -0.61
CNKSR3-202ENST00000433165 TSHZ2Q9NRE2 1034 aa11.25□□□□□ -0.61
CNKSR3-202ENST00000433165 MYO5CQ9NQX4 1742 aa11.25□□□□□ -0.61
CNKSR3-202ENST00000433165 FANCAO15360 1455 aa11.24□□□□□ -0.61
CNKSR3-202ENST00000433165 TTC37Q6PGP7 1564 aa11.24□□□□□ -0.61
CNKSR3-202ENST00000433165 COL17A1Q9UMD9 1497 aaPredicted RBP11.23□□□□□ -0.61
CNKSR3-202ENST00000433165 PLCH2O75038 1416 aa11.23□□□□□ -0.61
CNKSR3-202ENST00000433165 DENND4BO75064 1496 aaPredicted RBP11.23□□□□□ -0.61
CNKSR3-202ENST00000433165 AKNAQ7Z591 1439 aa11.22□□□□□ -0.61
CNKSR3-202ENST00000433165 CEP162Q5TB80 1403 aa11.2□□□□□ -0.62
CNKSR3-202ENST00000433165 MAGI2Q86UL8 1455 aa11.2□□□□□ -0.62
CNKSR3-202ENST00000433165 LRRIQ1Q96JM4 1722 aa11.2□□□□□ -0.62
CNKSR3-202ENST00000433165 EFCAB2Q5VUJ9 269 aa11.2□□□□□ -0.62
CNKSR3-202ENST00000433165 ZMYM4Q5VZL5 1548 aa11.19□□□□□ -0.62
CNKSR3-202ENST00000433165 ADGRL1O94910 1474 aa11.18□□□□□ -0.62
CNKSR3-202ENST00000433165 RICTORQ6R327 1708 aa11.18□□□□□ -0.62
CNKSR3-202ENST00000433165 PREX2Q70Z35 1606 aa11.17□□□□□ -0.62
CNKSR3-202ENST00000433165 ARHGAP5Q13017 1502 aa11.17□□□□□ -0.62
CNKSR3-202ENST00000433165 ARHGEF40Q8TER5 1519 aa11.17□□□□□ -0.62
CNKSR3-202ENST00000433165 FRMPD1Q5SYB0 1578 aa11.17□□□□□ -0.62
CNKSR3-202ENST00000433165 EHBP1L1Q8N3D4 1523 aa11.16□□□□□ -0.62
CNKSR3-202ENST00000433165 POGZQ7Z3K3 1410 aa11.15□□□□□ -0.62
CNKSR3-202ENST00000433165 ZFYVE16Q7Z3T8 1539 aa11.15□□□□□ -0.62
CNKSR3-202ENST00000433165 ZNF518AQ6AHZ1 1483 aa11.14□□□□□ -0.63
CNKSR3-202ENST00000433165 PLEKHH2Q8IVE3 1493 aa11.14□□□□□ -0.63
CNKSR3-202ENST00000433165 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
CNKSR3-202ENST00000433165 MTUS2Q5JR59 1369 aa11.14□□□□□ -0.63
CNKSR3-202ENST00000433165 ITSN2Q9NZM3 1697 aa11.13□□□□□ -0.63
CNKSR3-202ENST00000433165 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
CNKSR3-202ENST00000433165 RAPGEF3O95398 923 aa11.12□□□□□ -0.63
CNKSR3-202ENST00000433165 CDC42BPBQ9Y5S2 1711 aa11.12□□□□□ -0.63
CNKSR3-202ENST00000433165 VPS8Q8N3P4 1428 aa11.11□□□□□ -0.63
CNKSR3-202ENST00000433165 CDC42BPAQ5VT25 1732 aa11.11□□□□□ -0.63
CNKSR3-202ENST00000433165 ABCC1P33527 1531 aa11.1□□□□□ -0.63
CNKSR3-202ENST00000433165 MAP3K1Q13233 1512 aa11.1□□□□□ -0.63
CNKSR3-202ENST00000433165 KDM5CP41229 1560 aa11.1□□□□□ -0.63
CNKSR3-202ENST00000433165 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
CNKSR3-202ENST00000433165 HECW2Q9P2P5 1572 aa11.09□□□□□ -0.63
CNKSR3-202ENST00000433165 BCORL1Q5H9F3 1711 aa11.09□□□□□ -0.63
CNKSR3-202ENST00000433165 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
CNKSR3-202ENST00000433165 REREQ9P2R6 1566 aa11.09□□□□□ -0.63
CNKSR3-202ENST00000433165 C9orf84Q5VXU9 1444 aa11.08□□□□□ -0.64
CNKSR3-202ENST00000433165 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
CNKSR3-202ENST00000433165 ADAMTSL3P82987 1691 aa11.08□□□□□ -0.64
CNKSR3-202ENST00000433165 ATP10AO60312 1499 aa11.08□□□□□ -0.64
CNKSR3-202ENST00000433165 KIAA1107Q9UPP5 1409 aa11.07□□□□□ -0.64
CNKSR3-202ENST00000433165 MLH3Q9UHC1 1453 aa11.07□□□□□ -0.64
CNKSR3-202ENST00000433165 ARID4BQ4LE39 1312 aaPredicted RBP11.07□□□□□ -0.64
CNKSR3-202ENST00000433165 GPATCH8Q9UKJ3 1502 aaKnown RBP11.07□□□□□ -0.64
CNKSR3-202ENST00000433165 CFDP1Q9UEE9 299 aaPredicted RBP11.05□□□□□ -0.64
CNKSR3-202ENST00000433165 SAMD9LQ8IVG5 1584 aa11.04□□□□□ -0.64
CNKSR3-202ENST00000433165 APLP2Q06481 763 aa11.04□□□□□ -0.64
CNKSR3-202ENST00000433165 MYT1LQ9UL68 1186 aa11.04□□□□□ -0.64
CNKSR3-202ENST00000433165 YEATS2Q9ULM3 1422 aa11.03□□□□□ -0.64
CNKSR3-202ENST00000433165 DIP2CQ9Y2E4 1556 aa11.02□□□□□ -0.64
CNKSR3-202ENST00000433165 RSPH4AQ5TD94 716 aa11.02□□□□□ -0.64
CNKSR3-202ENST00000433165 AGLP35573 1532 aa11.02□□□□□ -0.64
CNKSR3-202ENST00000433165 SYCP2Q9BX26 1530 aa11.02□□□□□ -0.65
CNKSR3-202ENST00000433165 LRRC9Q6ZRR7 1453 aa11.02□□□□□ -0.65
CNKSR3-202ENST00000433165 MADDQ8WXG6 1647 aa11.02□□□□□ -0.65
CNKSR3-202ENST00000433165 PTPRMP28827 1452 aa11.01□□□□□ -0.65
CNKSR3-202ENST00000433165 NCOA2Q15596 1464 aa11.01□□□□□ -0.65
CNKSR3-202ENST00000433165 FER1L4A9Z1Z3 1794 aa11□□□□□ -0.65
CNKSR3-202ENST00000433165 ZNF777Q9ULD5 760 aaPredicted RBP11□□□□□ -0.65
CNKSR3-202ENST00000433165 ABCA6Q8N139 1617 aa11□□□□□ -0.65
CNKSR3-202ENST00000433165 TRAPPC8Q9Y2L5 1435 aa11□□□□□ -0.65
CNKSR3-202ENST00000433165 PRKCSHP14314 528 aaPredicted RBP11□□□□□ -0.65
CNKSR3-202ENST00000433165 RIMS1Q86UR5 1692 aaKnown RBP11□□□□□ -0.65
CNKSR3-202ENST00000433165 ARHGEF12Q9NZN5 1544 aa10.99□□□□□ -0.65
CNKSR3-202ENST00000433165 SPAG9O60271 1321 aaKnown RBP10.99□□□□□ -0.65
CNKSR3-202ENST00000433165 ATP7AQ04656 1500 aa10.99□□□□□ -0.65
CNKSR3-202ENST00000433165 AFAP1Q8N556 730 aa10.99□□□□□ -0.65
CNKSR3-202ENST00000433165 INO80Q9ULG1 1556 aaPredicted RBP10.99□□□□□ -0.65
CNKSR3-202ENST00000433165 ADGBQ8N7X0 1667 aa10.99□□□□□ -0.65
CNKSR3-202ENST00000433165 KIDINS220Q9ULH0 1771 aa10.98□□□□□ -0.65
CNKSR3-202ENST00000433165 RTEL1-TNFRSF6BF6WH68 1400 aa10.98□□□□□ -0.65
CNKSR3-202ENST00000433165 MIA2Q96PC5 1412 aa10.97□□□□□ -0.65
CNKSR3-202ENST00000433165 CNTLNQ9NXG0 1405 aa10.97□□□□□ -0.65
CNKSR3-202ENST00000433165 ARHGEF5Q12774 1597 aa10.97□□□□□ -0.65
CNKSR3-202ENST00000433165 ESF1Q9H501 851 aaKnown RBP10.97□□□□□ -0.65
CNKSR3-202ENST00000433165 RBM19Q9Y4C8 960 aaKnown RBP10.97□□□□□ -0.65
CNKSR3-202ENST00000433165 CCDC141Q6ZP82 1450 aa10.96□□□□□ -0.65
CNKSR3-202ENST00000433165 CAMSAP2Q08AD1 1489 aa10.96□□□□□ -0.65
CNKSR3-202ENST00000433165 FAM135AQ9P2D6 1515 aa10.95□□□□□ -0.66
CNKSR3-202ENST00000433165 HNRNPMP52272 730 aaKnown RBP eCLIP10.94□□□□□ -0.66
CNKSR3-202ENST00000433165 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
CNKSR3-202ENST00000433165 MYOM3Q5VTT5 1437 aa10.94□□□□□ -0.66
CNKSR3-202ENST00000433165 A2MP01023 1474 aa10.94□□□□□ -0.66
CNKSR3-202ENST00000433165 SIGLEC1Q9BZZ2 1709 aa10.94□□□□□ -0.66
CNKSR3-202ENST00000433165 MROH2AA6NES4 1674 aa10.93□□□□□ -0.66
CNKSR3-202ENST00000433165 MBD5Q9P267 1494 aa10.93□□□□□ -0.66
CNKSR3-202ENST00000433165 PLXNC1O60486 1568 aa10.93□□□□□ -0.66
CNKSR3-202ENST00000433165 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
CNKSR3-202ENST00000433165 MAST1Q9Y2H9 1570 aa10.92□□□□□ -0.66
CNKSR3-202ENST00000433165 TSPY4P0CV99 314 aa10.92□□□□□ -0.66
CNKSR3-202ENST00000433165 TSPY10P0CW01 314 aa10.92□□□□□ -0.66
CNKSR3-202ENST00000433165 MLECQ14165 292 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms