RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 NBR1Q14596 966 aa11.8□□□□□ -0.52
VTI1A-202ENST00000432306 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-202ENST00000432306 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-202ENST00000432306 TSPOAP1O95153 1857 aa11.79□□□□□ -0.52
VTI1A-202ENST00000432306 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
VTI1A-202ENST00000432306 KDM4FA0A1W2PPD8 638 aa11.77□□□□□ -0.52
VTI1A-202ENST00000432306 JPH4Q96JJ6 628 aa11.77□□□□□ -0.52
VTI1A-202ENST00000432306 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-202ENST00000432306 KIF21BO75037 1637 aa11.76□□□□□ -0.53
VTI1A-202ENST00000432306 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
VTI1A-202ENST00000432306 UBTFP17480 764 aaKnown RBP11.75□□□□□ -0.53
VTI1A-202ENST00000432306 ADCY10Q96PN6 1610 aa11.74□□□□□ -0.53
VTI1A-202ENST00000432306 RUSC2Q8N2Y8 1516 aa11.74□□□□□ -0.53
VTI1A-202ENST00000432306 MIER1Q8N108 512 aa11.74□□□□□ -0.53
VTI1A-202ENST00000432306 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
VTI1A-202ENST00000432306 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
VTI1A-202ENST00000432306 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
VTI1A-202ENST00000432306 SPDYE2Q495Y8 402 aa11.72□□□□□ -0.53
VTI1A-202ENST00000432306 SSUH2Q9Y2M2 353 aa11.72□□□□□ -0.53
VTI1A-202ENST00000432306 VPS8Q8N3P4 1428 aa11.71□□□□□ -0.54
VTI1A-202ENST00000432306 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
VTI1A-202ENST00000432306 BBXQ8WY36 941 aaPredicted RBP11.69□□□□□ -0.54
VTI1A-202ENST00000432306 PAXIP1Q6ZW49 1069 aaPredicted RBP11.67□□□□□ -0.54
VTI1A-202ENST00000432306 CLIP1P30622 1438 aa11.65□□□□□ -0.54
VTI1A-202ENST00000432306 ADGRL1O94910 1474 aa11.64□□□□□ -0.55
VTI1A-202ENST00000432306 KIAA0586Q9BVV6 1533 aa11.64□□□□□ -0.55
VTI1A-202ENST00000432306 PPRC1Q5VV67 1664 aaKnown RBP11.62□□□□□ -0.55
VTI1A-202ENST00000432306 GLI2P10070 1586 aa11.62□□□□□ -0.55
VTI1A-202ENST00000432306 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
VTI1A-202ENST00000432306 HECW2Q9P2P5 1572 aa11.61□□□□□ -0.55
VTI1A-202ENST00000432306 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
VTI1A-202ENST00000432306 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
VTI1A-202ENST00000432306 PLB1Q6P1J6 1458 aa11.6□□□□□ -0.55
VTI1A-202ENST00000432306 CUL7Q14999 1698 aa11.6□□□□□ -0.55
VTI1A-202ENST00000432306 DHX57Q6P158 1386 aaKnown RBP11.59□□□□□ -0.55
VTI1A-202ENST00000432306 ABCC2Q92887 1545 aa11.59□□□□□ -0.55
VTI1A-202ENST00000432306 PTPRGP23470 1445 aa11.59□□□□□ -0.55
VTI1A-202ENST00000432306 ASXL2Q76L83 1435 aa11.57□□□□□ -0.56
VTI1A-202ENST00000432306 CARMIL2Q6F5E8 1435 aa11.56□□□□□ -0.56
VTI1A-202ENST00000432306 TEX14Q8IWB6 1497 aa11.55□□□□□ -0.56
VTI1A-202ENST00000432306 RRBP1Q9P2E9 1410 aaKnown RBP11.55□□□□□ -0.56
VTI1A-202ENST00000432306 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
VTI1A-202ENST00000432306 MAP3K4Q9Y6R4 1608 aa11.54□□□□□ -0.56
VTI1A-202ENST00000432306 UHRF1BP1LA0JNW5 1464 aa11.53□□□□□ -0.56
VTI1A-202ENST00000432306 ANP32EQ9BTT0 268 aa11.52□□□□□ -0.56
VTI1A-202ENST00000432306 STAG3Q9UJ98 1225 aa11.52□□□□□ -0.56
VTI1A-202ENST00000432306 CCDC9Q9Y3X0 531 aaKnown RBP11.52□□□□□ -0.56
VTI1A-202ENST00000432306 IGF1RP08069 1367 aa11.51□□□□□ -0.57
VTI1A-202ENST00000432306 KIF27Q86VH2 1401 aa11.51□□□□□ -0.57
VTI1A-202ENST00000432306 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
VTI1A-202ENST00000432306 RAPGEF2Q9Y4G8 1499 aa11.5□□□□□ -0.57
VTI1A-202ENST00000432306 EPRSP07814 1512 aaKnown RBP11.5□□□□□ -0.57
VTI1A-202ENST00000432306 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
VTI1A-202ENST00000432306 IQGAP2Q13576 1575 aa11.49□□□□□ -0.57
VTI1A-202ENST00000432306 PRXQ9BXM0 1461 aa11.48□□□□□ -0.57
VTI1A-202ENST00000432306 PKD2Q13563 968 aa11.48□□□□□ -0.57
VTI1A-202ENST00000432306 FBXO41Q8TF61 875 aa11.48□□□□□ -0.57
VTI1A-202ENST00000432306 KDM5BQ9UGL1 1544 aa11.48□□□□□ -0.57
VTI1A-202ENST00000432306 ZCCHC11Q5TAX3 1644 aaKnown RBP11.47□□□□□ -0.57
VTI1A-202ENST00000432306 HMGB1P09429 215 aaKnown RBP11.46□□□□□ -0.58
VTI1A-202ENST00000432306 CARMIL1Q5VZK9 1371 aa11.45□□□□□ -0.58
VTI1A-202ENST00000432306 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
VTI1A-202ENST00000432306 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
VTI1A-202ENST00000432306 CFAP43Q8NDM7 1665 aa11.43□□□□□ -0.58
VTI1A-202ENST00000432306 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
VTI1A-202ENST00000432306 DISP1Q96F81 1524 aa11.42□□□□□ -0.58
VTI1A-202ENST00000432306 MAP3K1Q13233 1512 aa11.41□□□□□ -0.58
VTI1A-202ENST00000432306 WDR7Q9Y4E6 1490 aa11.41□□□□□ -0.58
VTI1A-202ENST00000432306 CDK11AQ9UQ88 783 aaPredicted RBP11.4□□□□□ -0.58
VTI1A-202ENST00000432306 MAGI3Q5TCQ9 1506 aa11.4□□□□□ -0.59
VTI1A-202ENST00000432306 KIAA0556O60303 1618 aa11.39□□□□□ -0.59
VTI1A-202ENST00000432306 UGGT2Q9NYU1 1516 aa11.39□□□□□ -0.59
VTI1A-202ENST00000432306 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
VTI1A-202ENST00000432306 CDK11BP21127 795 aaKnown RBP11.38□□□□□ -0.59
VTI1A-202ENST00000432306 CD109Q6YHK3 1445 aa11.37□□□□□ -0.59
VTI1A-202ENST00000432306 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
VTI1A-202ENST00000432306 ZBTB7CA1YPR0 619 aa11.36□□□□□ -0.59
VTI1A-202ENST00000432306 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
VTI1A-202ENST00000432306 ADAMTSL3P82987 1691 aa11.33□□□□□ -0.6
VTI1A-202ENST00000432306 BCL11AQ9H165 835 aa11.32□□□□□ -0.6
VTI1A-202ENST00000432306 PTPRMP28827 1452 aa11.32□□□□□ -0.6
VTI1A-202ENST00000432306 ARAP3Q8WWN8 1544 aa11.32□□□□□ -0.6
VTI1A-202ENST00000432306 CCER2I3L3R5 266 aa11.32□□□□□ -0.6
VTI1A-202ENST00000432306 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
VTI1A-202ENST00000432306 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
VTI1A-202ENST00000432306 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
VTI1A-202ENST00000432306 KCNH8Q96L42 1107 aa11.32□□□□□ -0.6
VTI1A-202ENST00000432306 CTTNBP2Q8WZ74 1663 aa11.31□□□□□ -0.6
VTI1A-202ENST00000432306 ABCA8O94911 1581 aa11.29□□□□□ -0.6
VTI1A-202ENST00000432306 PCF11O94913 1555 aaKnown RBP11.29□□□□□ -0.6
VTI1A-202ENST00000432306 ARHGAP35Q9NRY4 1499 aa11.29□□□□□ -0.6
VTI1A-202ENST00000432306 PHLDB1Q86UU1 1377 aa11.29□□□□□ -0.6
VTI1A-202ENST00000432306 BCORL1Q5H9F3 1711 aa11.28□□□□□ -0.6
VTI1A-202ENST00000432306 RAB3GAP2Q9H2M9 1393 aa11.28□□□□□ -0.6
VTI1A-202ENST00000432306 LMTK3Q96Q04 1460 aa11.28□□□□□ -0.6
VTI1A-202ENST00000432306 PPP1R15AO75807 674 aaPredicted RBP11.27□□□□□ -0.61
VTI1A-202ENST00000432306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.27□□□□□ -0.61
VTI1A-202ENST00000432306 ECM2O94769 699 aaPredicted RBP11.26□□□□□ -0.61
VTI1A-202ENST00000432306 SPDYE1Q8NFV5 336 aaPredicted RBP11.26□□□□□ -0.61
VTI1A-202ENST00000432306 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms