RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SOX12O15370 315 aa7.42□□□□□ -1.22
CDC40-204ENST00000431461 MICALL2Q8IY33 904 aa7.42□□□□□ -1.22
CDC40-204ENST00000431461 EFCAB3Q8N7B9 438 aa7.41□□□□□ -1.22
CDC40-204ENST00000431461 TMEM92Q6UXU6 159 aa7.4□□□□□ -1.22
CDC40-204ENST00000431461 CIZ1Q9ULV3 898 aaPredicted RBP7.4□□□□□ -1.22
CDC40-204ENST00000431461 ZNF316A6NFI3 1004 aaPredicted RBP7.39□□□□□ -1.23
CDC40-204ENST00000431461 ARSIQ5FYB1 569 aa7.36□□□□□ -1.23
CDC40-204ENST00000431461 IFFO2Q5TF58 517 aa7.34□□□□□ -1.23
CDC40-204ENST00000431461 IFNLR1Q8IU57 520 aaPredicted RBP7.32□□□□□ -1.24
CDC40-204ENST00000431461 Q6ZNB5 142 aa7.3□□□□□ -1.24
CDC40-204ENST00000431461 MS4A4AQ96JQ5 239 aa7.3□□□□□ -1.24
CDC40-204ENST00000431461 ADGRD1Q6QNK2 874 aa7.29□□□□□ -1.24
CDC40-204ENST00000431461 A0A0G2JS52 829 aa7.27□□□□□ -1.25
CDC40-204ENST00000431461 SLC34A2O95436 690 aa7.27□□□□□ -1.25
CDC40-204ENST00000431461 PSDA5PKW4 1024 aaPredicted RBP7.26□□□□□ -1.25
CDC40-204ENST00000431461 RIOK3O14730 519 aaKnown RBP7.26□□□□□ -1.25
CDC40-204ENST00000431461 VGFO15240 615 aaPredicted RBP7.26□□□□□ -1.25
CDC40-204ENST00000431461 NLRP6P59044 892 aa7.26□□□□□ -1.25
CDC40-204ENST00000431461 PHF8Q9UPP1 1060 aa7.26□□□□□ -1.25
CDC40-204ENST00000431461 KHSRPQ92945 711 aaKnown RBP eCLIP7.25□□□□□ -1.25
CDC40-204ENST00000431461 AXIN2Q9Y2T1 843 aa7.25□□□□□ -1.25
CDC40-204ENST00000431461 TK2O00142 265 aa7.24□□□□□ -1.25
CDC40-204ENST00000431461 KIF3CO14782 793 aa7.24□□□□□ -1.25
CDC40-204ENST00000431461 POTEEQ6S8J3 1075 aa7.23□□□□□ -1.25
CDC40-204ENST00000431461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.22□□□□□ -1.25
CDC40-204ENST00000431461 ARHGAP33O14559 1287 aa7.22□□□□□ -1.25
CDC40-204ENST00000431461 NUDT7P0C024 238 aa7.22□□□□□ -1.25
CDC40-204ENST00000431461 KCTD12Q96CX2 325 aaKnown RBP7.22□□□□□ -1.25
CDC40-204ENST00000431461 ZFP91Q96JP5 570 aaPredicted RBP7.22□□□□□ -1.25
CDC40-204ENST00000431461 TAOK2Q9UL54 1235 aa7.22□□□□□ -1.25
CDC40-204ENST00000431461 LHX6Q9UPM6 363 aa7.21□□□□□ -1.26
CDC40-204ENST00000431461 PCDHGA4Q9Y5G9 962 aa7.2□□□□□ -1.26
CDC40-204ENST00000431461 HRO43593 1189 aa7.19□□□□□ -1.26
CDC40-204ENST00000431461 FBXO22Q8NEZ5 403 aa7.19□□□□□ -1.26
CDC40-204ENST00000431461 STAC3Q96MF2 364 aa7.18□□□□□ -1.26
CDC40-204ENST00000431461 C2orf72A6NCS6 295 aa7.17□□□□□ -1.26
CDC40-204ENST00000431461 LAPTM4AQ15012 233 aa7.16□□□□□ -1.26
CDC40-204ENST00000431461 RNF25Q96BH1 459 aaPredicted RBP7.16□□□□□ -1.26
CDC40-204ENST00000431461 KDM4FA0A1W2PPD8 638 aa7.12□□□□□ -1.27
CDC40-204ENST00000431461 PTPN5P54829 565 aa7.12□□□□□ -1.27
CDC40-204ENST00000431461 TMC2Q8TDI7 906 aa7.12□□□□□ -1.27
CDC40-204ENST00000431461 PTCD2Q8WV60 388 aaKnown RBP7.11□□□□□ -1.27
CDC40-204ENST00000431461 MFRPQ9BY79 579 aa7.11□□□□□ -1.27
CDC40-204ENST00000431461 TRAF7Q6Q0C0 670 aa7.1□□□□□ -1.27
CDC40-204ENST00000431461 BCL11BQ9C0K0 894 aaPredicted RBP7.1□□□□□ -1.27
CDC40-204ENST00000431461 PPP4R3BQ5MIZ7 849 aa7.09□□□□□ -1.27
CDC40-204ENST00000431461 KCNH8Q96L42 1107 aa7.09□□□□□ -1.27
CDC40-204ENST00000431461 DMRTA1Q5VZB9 504 aa7.07□□□□□ -1.28
CDC40-204ENST00000431461 TBC1D12O60347 775 aa7.06□□□□□ -1.28
CDC40-204ENST00000431461 SLC4A5Q9BY07 1137 aa7.06□□□□□ -1.28
CDC40-204ENST00000431461 STK24Q9Y6E0 443 aa7.06□□□□□ -1.28
CDC40-204ENST00000431461 PSEN2P49810 448 aa7.05□□□□□ -1.28
CDC40-204ENST00000431461 LCE2BO14633 110 aa7.03□□□□□ -1.28
CDC40-204ENST00000431461 THSD4Q6ZMP0 1018 aa7.03□□□□□ -1.28
CDC40-204ENST00000431461 FOXK1P85037 733 aa7.02□□□□□ -1.29
CDC40-204ENST00000431461 VPS9D1Q9Y2B5 631 aa7.02□□□□□ -1.29
CDC40-204ENST00000431461 STK25O00506 426 aa7.01□□□□□ -1.29
CDC40-204ENST00000431461 ITGBL1O95965 494 aaPredicted RBP6.98□□□□□ -1.29
CDC40-204ENST00000431461 ZNF787Q6DD87 383 aa6.98□□□□□ -1.29
CDC40-204ENST00000431461 KCNK17Q96T54 332 aa6.98□□□□□ -1.29
CDC40-204ENST00000431461 BHMG1C9JSJ3 638 aaPredicted RBP6.97□□□□□ -1.29
CDC40-204ENST00000431461 GPHNQ9NQX3 736 aaPredicted RBP6.97□□□□□ -1.29
CDC40-204ENST00000431461 GOLGA8CPA6NN73 597 aa6.96□□□□□ -1.3
CDC40-204ENST00000431461 GFRA3O60609 400 aa6.96□□□□□ -1.3
CDC40-204ENST00000431461 PLPP6Q8IY26 295 aa6.96□□□□□ -1.3
CDC40-204ENST00000431461 ZNF775Q96BV0 537 aaPredicted RBP6.96□□□□□ -1.3
CDC40-204ENST00000431461 BCL2L12Q9HB09 334 aa6.96□□□□□ -1.3
CDC40-204ENST00000431461 WNT2BQ93097 391 aa6.94□□□□□ -1.3
CDC40-204ENST00000431461 NRG2O14511 850 aaPredicted RBP6.93□□□□□ -1.3
CDC40-204ENST00000431461 PTPREP23469 700 aa6.92□□□□□ -1.3
CDC40-204ENST00000431461 MRPL50Q8N5N7 158 aaKnown RBP6.92□□□□□ -1.3
CDC40-204ENST00000431461 NBPF3Q9H094 633 aa6.92□□□□□ -1.3
CDC40-204ENST00000431461 PPP1R37O75864 691 aa6.9□□□□□ -1.3
CDC40-204ENST00000431461 NYAP1Q6ZVC0 841 aa6.9□□□□□ -1.3
CDC40-204ENST00000431461 ZBED2Q9BTP6 218 aa6.9□□□□□ -1.3
CDC40-204ENST00000431461 DSG2Q14126 1118 aa6.89□□□□□ -1.31
CDC40-204ENST00000431461 ZNF454Q8N9F8 522 aa6.89□□□□□ -1.31
CDC40-204ENST00000431461 OXER1Q8TDS5 423 aa6.89□□□□□ -1.31
CDC40-204ENST00000431461 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
CDC40-204ENST00000431461 FOSBP53539 338 aa6.88□□□□□ -1.31
CDC40-204ENST00000431461 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
CDC40-204ENST00000431461 ECM2O94769 699 aaPredicted RBP6.87□□□□□ -1.31
CDC40-204ENST00000431461 ANO8Q9HCE9 1232 aaPredicted RBP6.86□□□□□ -1.31
CDC40-204ENST00000431461 KCNC4Q03721 635 aa6.84□□□□□ -1.31
CDC40-204ENST00000431461 JPH4Q96JJ6 628 aa6.84□□□□□ -1.31
CDC40-204ENST00000431461 RGL2O15211 777 aa6.83□□□□□ -1.32
CDC40-204ENST00000431461 ANKK1Q8NFD2 765 aa6.83□□□□□ -1.32
CDC40-204ENST00000431461 RABGEF1Q9UJ41 708 aa6.83□□□□□ -1.32
CDC40-204ENST00000431461 LAPTM4BQ86VI4 370 aa6.82□□□□□ -1.32
CDC40-204ENST00000431461 ZDHHC16Q969W1 377 aa6.82□□□□□ -1.32
CDC40-204ENST00000431461 PKD2Q13563 968 aa6.81□□□□□ -1.32
CDC40-204ENST00000431461 PPP1R3GB7ZBB8 358 aa6.79□□□□□ -1.32
CDC40-204ENST00000431461 SOWAHBA6NEL2 793 aa6.78□□□□□ -1.32
CDC40-204ENST00000431461 ONECUT3O60422 494 aaPredicted RBP6.78□□□□□ -1.32
CDC40-204ENST00000431461 UPF1Q92900 1129 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDC40-204ENST00000431461 RYDENQ9NUL5 291 aaKnown RBP6.78□□□□□ -1.32
CDC40-204ENST00000431461 CRISPLD2Q9H0B8 497 aa6.77□□□□□ -1.33
CDC40-204ENST00000431461 PPP1R15BQ5SWA1 713 aa6.76□□□□□ -1.33
CDC40-204ENST00000431461 ADAM33Q9BZ11 813 aa6.76□□□□□ -1.33
CDC40-204ENST00000431461 EVI5O60447 810 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms