RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
TSPAN9-203ENST00000431374 MTUS2Q5JR59 1369 aa24.4■■□□□ 1.5
TSPAN9-203ENST00000431374 RICTORQ6R327 1708 aa24.38■■□□□ 1.49
TSPAN9-203ENST00000431374 ZMYM4Q5VZL5 1548 aa24.37■■□□□ 1.49
TSPAN9-203ENST00000431374 PREX2Q70Z35 1606 aa24.35■■□□□ 1.49
TSPAN9-203ENST00000431374 ARHGEF40Q8TER5 1519 aa24.34■■□□□ 1.49
TSPAN9-203ENST00000431374 GPATCH8Q9UKJ3 1502 aaKnown RBP24.34■■□□□ 1.49
TSPAN9-203ENST00000431374 MAGI2Q86UL8 1455 aa24.33■■□□□ 1.49
TSPAN9-203ENST00000431374 EHBP1L1Q8N3D4 1523 aa24.33■■□□□ 1.49
TSPAN9-203ENST00000431374 CDC42BPBQ9Y5S2 1711 aa24.3■■□□□ 1.48
TSPAN9-203ENST00000431374 YEATS2Q9ULM3 1422 aa24.3■■□□□ 1.48
TSPAN9-203ENST00000431374 ZFYVE16Q7Z3T8 1539 aa24.3■■□□□ 1.48
TSPAN9-203ENST00000431374 CCNB3Q8WWL7 1395 aa24.29■■□□□ 1.48
TSPAN9-203ENST00000431374 ZNF518AQ6AHZ1 1483 aa24.29■■□□□ 1.48
TSPAN9-203ENST00000431374 ABCC1P33527 1531 aa24.29■■□□□ 1.48
TSPAN9-203ENST00000431374 AFAP1Q8N556 730 aa24.28■■□□□ 1.48
TSPAN9-203ENST00000431374 ARHGEF12Q9NZN5 1544 aa24.27■■□□□ 1.48
TSPAN9-203ENST00000431374 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
TSPAN9-203ENST00000431374 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
TSPAN9-203ENST00000431374 CFDP1Q9UEE9 299 aaPredicted RBP24.25■■□□□ 1.47
TSPAN9-203ENST00000431374 TRAPPC8Q9Y2L5 1435 aa24.25■■□□□ 1.47
TSPAN9-203ENST00000431374 ZNF777Q9ULD5 760 aaPredicted RBP24.24■■□□□ 1.47
TSPAN9-203ENST00000431374 KDM5CP41229 1560 aa24.24■■□□□ 1.47
TSPAN9-203ENST00000431374 ARID4BQ4LE39 1312 aaPredicted RBP24.23■■□□□ 1.47
TSPAN9-203ENST00000431374 SAMD9LQ8IVG5 1584 aa24.2■■□□□ 1.47
TSPAN9-203ENST00000431374 MAP3K1Q13233 1512 aa24.2■■□□□ 1.47
TSPAN9-203ENST00000431374 NCOA2Q15596 1464 aa24.2■■□□□ 1.47
TSPAN9-203ENST00000431374 LRRC9Q6ZRR7 1453 aa24.2■■□□□ 1.47
TSPAN9-203ENST00000431374 KIAA1107Q9UPP5 1409 aa24.19■■□□□ 1.46
TSPAN9-203ENST00000431374 ATP10AO60312 1499 aa24.19■■□□□ 1.46
TSPAN9-203ENST00000431374 MLH3Q9UHC1 1453 aa24.19■■□□□ 1.46
TSPAN9-203ENST00000431374 PLEKHH2Q8IVE3 1493 aa24.18■■□□□ 1.46
TSPAN9-203ENST00000431374 SYCP2Q9BX26 1530 aa24.17■■□□□ 1.46
TSPAN9-203ENST00000431374 ITSN2Q9NZM3 1697 aa24.17■■□□□ 1.46
TSPAN9-203ENST00000431374 C9orf84Q5VXU9 1444 aa24.17■■□□□ 1.46
TSPAN9-203ENST00000431374 HNRNPMP52272 730 aaKnown RBP eCLIP24.16■■□□□ 1.46
TSPAN9-203ENST00000431374 KANK4Q5T7N3 995 aaPredicted RBP24.16■■□□□ 1.46
TSPAN9-203ENST00000431374 HECW2Q9P2P5 1572 aa24.15■■□□□ 1.46
TSPAN9-203ENST00000431374 MYT1LQ9UL68 1186 aa24.14■■□□□ 1.45
TSPAN9-203ENST00000431374 ADAMTSL3P82987 1691 aa24.14■■□□□ 1.45
TSPAN9-203ENST00000431374 ZNF644Q9H582 1327 aaPredicted RBP24.13■■□□□ 1.45
TSPAN9-203ENST00000431374 SUPT6HQ7KZ85 1726 aaKnown RBP24.13■■□□□ 1.45
TSPAN9-203ENST00000431374 BCORL1Q5H9F3 1711 aa24.13■■□□□ 1.45
TSPAN9-203ENST00000431374 DIP2CQ9Y2E4 1556 aa24.11■■□□□ 1.45
TSPAN9-203ENST00000431374 SIGLEC1Q9BZZ2 1709 aa24.1■■□□□ 1.45
TSPAN9-203ENST00000431374 SPAG9O60271 1321 aaKnown RBP24.09■■□□□ 1.45
TSPAN9-203ENST00000431374 PTPRMP28827 1452 aa24.07■■□□□ 1.44
TSPAN9-203ENST00000431374 MBD5Q9P267 1494 aa24.07■■□□□ 1.44
TSPAN9-203ENST00000431374 ABCA6Q8N139 1617 aa24.07■■□□□ 1.44
TSPAN9-203ENST00000431374 APLP2Q06481 763 aa24.07■■□□□ 1.44
TSPAN9-203ENST00000431374 MADDQ8WXG6 1647 aa24.06■■□□□ 1.44
TSPAN9-203ENST00000431374 MLECQ14165 292 aa24.06■■□□□ 1.44
TSPAN9-203ENST00000431374 REREQ9P2R6 1566 aa24.06■■□□□ 1.44
TSPAN9-203ENST00000431374 CAMSAP2Q08AD1 1489 aa24.03■■□□□ 1.44
TSPAN9-203ENST00000431374 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
TSPAN9-203ENST00000431374 AGLP35573 1532 aa24■■□□□ 1.43
TSPAN9-203ENST00000431374 ATP7AQ04656 1500 aa24■■□□□ 1.43
TSPAN9-203ENST00000431374 MYOM3Q5VTT5 1437 aa23.99■■□□□ 1.43
TSPAN9-203ENST00000431374 INO80Q9ULG1 1556 aaPredicted RBP23.99■■□□□ 1.43
TSPAN9-203ENST00000431374 CCDC141Q6ZP82 1450 aa23.97■■□□□ 1.43
TSPAN9-203ENST00000431374 MIA2Q96PC5 1412 aa23.96■■□□□ 1.43
TSPAN9-203ENST00000431374 RSPH4AQ5TD94 716 aa23.96■■□□□ 1.43
TSPAN9-203ENST00000431374 RTEL1-TNFRSF6BF6WH68 1400 aa23.95■■□□□ 1.42
TSPAN9-203ENST00000431374 RIMS1Q86UR5 1692 aaKnown RBP23.95■■□□□ 1.42
TSPAN9-203ENST00000431374 A2MP01023 1474 aa23.93■■□□□ 1.42
TSPAN9-203ENST00000431374 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
TSPAN9-203ENST00000431374 PLXNC1O60486 1568 aa23.9■■□□□ 1.42
TSPAN9-203ENST00000431374 FER1L4A9Z1Z3 1794 aa23.88■■□□□ 1.41
TSPAN9-203ENST00000431374 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
TSPAN9-203ENST00000431374 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
TSPAN9-203ENST00000431374 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
TSPAN9-203ENST00000431374 DHX29Q7Z478 1369 aaKnown RBP23.84■■□□□ 1.41
TSPAN9-203ENST00000431374 FGD6Q6ZV73 1430 aa23.84■■□□□ 1.41
TSPAN9-203ENST00000431374 CEBPAP49715 358 aaPredicted RBP23.82■■□□□ 1.4
TSPAN9-203ENST00000431374 ESF1Q9H501 851 aaKnown RBP23.81■■□□□ 1.4
TSPAN9-203ENST00000431374 CNTLNQ9NXG0 1405 aa23.81■■□□□ 1.4
TSPAN9-203ENST00000431374 ADGBQ8N7X0 1667 aa23.8■■□□□ 1.4
TSPAN9-203ENST00000431374 TCOF1Q13428 1488 aaKnown RBP23.79■■□□□ 1.4
TSPAN9-203ENST00000431374 LMTK3Q96Q04 1460 aa23.79■■□□□ 1.4
TSPAN9-203ENST00000431374 MAST1Q9Y2H9 1570 aa23.78■■□□□ 1.4
TSPAN9-203ENST00000431374 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
TSPAN9-203ENST00000431374 ABCC5O15440 1437 aa23.76■■□□□ 1.39
TSPAN9-203ENST00000431374 GGT6Q6P531 493 aa23.76■■□□□ 1.39
TSPAN9-203ENST00000431374 PPP6R1Q9UPN7 881 aa23.74■■□□□ 1.39
TSPAN9-203ENST00000431374 KIF3BO15066 747 aa23.73■■□□□ 1.39
TSPAN9-203ENST00000431374 SHANK2Q9UPX8 1470 aa23.73■■□□□ 1.39
TSPAN9-203ENST00000431374 DAPK1P53355 1430 aa23.71■■□□□ 1.39
TSPAN9-203ENST00000431374 ZMYM3Q14202 1370 aa23.71■■□□□ 1.39
TSPAN9-203ENST00000431374 C3P01024 1663 aa23.68■■□□□ 1.38
TSPAN9-203ENST00000431374 HSPA2P54652 639 aa23.67■■□□□ 1.38
TSPAN9-203ENST00000431374 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
TSPAN9-203ENST00000431374 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
TSPAN9-203ENST00000431374 MROH2AA6NES4 1674 aa23.65■■□□□ 1.38
TSPAN9-203ENST00000431374 FAM50AQ14320 339 aaKnown RBP23.65■■□□□ 1.38
TSPAN9-203ENST00000431374 NPATQ14207 1427 aa23.65■■□□□ 1.38
TSPAN9-203ENST00000431374 UHRF1BP1Q6BDS2 1440 aa23.64■■□□□ 1.37
TSPAN9-203ENST00000431374 DUOX2Q9NRD8 1548 aa23.64■■□□□ 1.37
TSPAN9-203ENST00000431374 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
TSPAN9-203ENST00000431374 CROCC2H7BZ55 1655 aa23.63■■□□□ 1.37
TSPAN9-203ENST00000431374 CLTCQ00610 1675 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms