RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 CDK11AQ9UQ88 783 aaPredicted RBP22.85■■□□□ 1.25
SEC13-211ENST00000431352 MYO5CQ9NQX4 1742 aa22.85■■□□□ 1.25
SEC13-211ENST00000431352 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
SEC13-211ENST00000431352 LRRIQ1Q96JM4 1722 aa22.82■■□□□ 1.24
SEC13-211ENST00000431352 SIGLEC1Q9BZZ2 1709 aa22.82■■□□□ 1.24
SEC13-211ENST00000431352 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
SEC13-211ENST00000431352 CLIP1P30622 1438 aa22.81■■□□□ 1.24
SEC13-211ENST00000431352 MLECQ14165 292 aa22.8■■□□□ 1.24
SEC13-211ENST00000431352 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
SEC13-211ENST00000431352 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
SEC13-211ENST00000431352 ARHGAP5Q13017 1502 aa22.79■■□□□ 1.24
SEC13-211ENST00000431352 EFCAB2Q5VUJ9 269 aa22.79■■□□□ 1.24
SEC13-211ENST00000431352 LMTK3Q96Q04 1460 aa22.74■■□□□ 1.23
SEC13-211ENST00000431352 CASKIN1Q8WXD9 1431 aa22.73■■□□□ 1.23
SEC13-211ENST00000431352 C9orf84Q5VXU9 1444 aa22.71■■□□□ 1.23
SEC13-211ENST00000431352 ATP10AO60312 1499 aa22.71■■□□□ 1.23
SEC13-211ENST00000431352 CCDC18Q5T9S5 1454 aa22.71■■□□□ 1.23
SEC13-211ENST00000431352 ZNF518AQ6AHZ1 1483 aa22.71■■□□□ 1.23
SEC13-211ENST00000431352 FER1L4A9Z1Z3 1794 aa22.71■■□□□ 1.23
SEC13-211ENST00000431352 MYT1LQ9UL68 1186 aa22.7■■□□□ 1.22
SEC13-211ENST00000431352 AFAP1Q8N556 730 aa22.68■■□□□ 1.22
SEC13-211ENST00000431352 CDC42BPBQ9Y5S2 1711 aa22.66■■□□□ 1.22
SEC13-211ENST00000431352 HSPA2P54652 639 aa22.66■■□□□ 1.22
SEC13-211ENST00000431352 PREX2Q70Z35 1606 aa22.66■■□□□ 1.22
SEC13-211ENST00000431352 KDM5CP41229 1560 aa22.66■■□□□ 1.22
SEC13-211ENST00000431352 FYCO1Q9BQS8 1478 aa22.65■■□□□ 1.22
SEC13-211ENST00000431352 ARHGEF12Q9NZN5 1544 aa22.64■■□□□ 1.21
SEC13-211ENST00000431352 ABCC1P33527 1531 aa22.62■■□□□ 1.21
SEC13-211ENST00000431352 DIP2CQ9Y2E4 1556 aa22.62■■□□□ 1.21
SEC13-211ENST00000431352 ABCA6Q8N139 1617 aa22.6■■□□□ 1.21
SEC13-211ENST00000431352 TRAPPC8Q9Y2L5 1435 aa22.59■■□□□ 1.21
SEC13-211ENST00000431352 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.21
SEC13-211ENST00000431352 CDC42BPAQ5VT25 1732 aa22.58■■□□□ 1.21
SEC13-211ENST00000431352 CEBPAP49715 358 aaPredicted RBP22.56■■□□□ 1.2
SEC13-211ENST00000431352 MLH3Q9UHC1 1453 aa22.55■■□□□ 1.2
SEC13-211ENST00000431352 ZNF777Q9ULD5 760 aaPredicted RBP22.55■■□□□ 1.2
SEC13-211ENST00000431352 FBXO41Q8TF61 875 aa22.54■■□□□ 1.2
SEC13-211ENST00000431352 REREQ9P2R6 1566 aa22.52■■□□□ 1.2
SEC13-211ENST00000431352 SAMD9LQ8IVG5 1584 aa22.5■■□□□ 1.19
SEC13-211ENST00000431352 PREX1Q8TCU6 1659 aa22.5■■□□□ 1.19
SEC13-211ENST00000431352 SYCP2Q9BX26 1530 aa22.5■■□□□ 1.19
SEC13-211ENST00000431352 GPATCH8Q9UKJ3 1502 aaKnown RBP22.49■■□□□ 1.19
SEC13-211ENST00000431352 KIDINS220Q9ULH0 1771 aa22.48■■□□□ 1.19
SEC13-211ENST00000431352 AGLP35573 1532 aa22.46■■□□□ 1.19
SEC13-211ENST00000431352 ESF1Q9H501 851 aaKnown RBP22.45■■□□□ 1.18
SEC13-211ENST00000431352 MTUS2Q5JR59 1369 aa22.45■■□□□ 1.18
SEC13-211ENST00000431352 CCNB3Q8WWL7 1395 aa22.44■■□□□ 1.18
SEC13-211ENST00000431352 UHRF1BP1Q6BDS2 1440 aa22.43■■□□□ 1.18
SEC13-211ENST00000431352 HNRNPMP52272 730 aaKnown RBP eCLIP22.43■■□□□ 1.18
SEC13-211ENST00000431352 C3P01024 1663 aa22.42■■□□□ 1.18
SEC13-211ENST00000431352 SPAG9O60271 1321 aaKnown RBP22.42■■□□□ 1.18
SEC13-211ENST00000431352 CFDP1Q9UEE9 299 aaPredicted RBP22.42■■□□□ 1.18
SEC13-211ENST00000431352 CEP162Q5TB80 1403 aa22.39■■□□□ 1.17
SEC13-211ENST00000431352 ATP7AQ04656 1500 aa22.38■■□□□ 1.17
SEC13-211ENST00000431352 PLEKHH2Q8IVE3 1493 aa22.38■■□□□ 1.17
SEC13-211ENST00000431352 EHBP1L1Q8N3D4 1523 aa22.37■■□□□ 1.17
SEC13-211ENST00000431352 INO80Q9ULG1 1556 aaPredicted RBP22.36■■□□□ 1.17
SEC13-211ENST00000431352 SUPT6HQ7KZ85 1726 aaKnown RBP22.36■■□□□ 1.17
SEC13-211ENST00000431352 TIAM1Q13009 1591 aa22.35■■□□□ 1.17
SEC13-211ENST00000431352 KIAA1107Q9UPP5 1409 aa22.35■■□□□ 1.17
SEC13-211ENST00000431352 CNTLNQ9NXG0 1405 aa22.34■■□□□ 1.17
SEC13-211ENST00000431352 CERKQ8TCT0 537 aa22.33■■□□□ 1.17
SEC13-211ENST00000431352 STRCQ7RTU9 1775 aa22.33■■□□□ 1.16
SEC13-211ENST00000431352 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
SEC13-211ENST00000431352 A2MP01023 1474 aa22.31■■□□□ 1.16
SEC13-211ENST00000431352 SETD1BQ9UPS6 1966 aaKnown RBP22.3■■□□□ 1.16
SEC13-211ENST00000431352 PLXNC1O60486 1568 aa22.3■■□□□ 1.16
SEC13-211ENST00000431352 DMRT2Q9Y5R5 561 aa22.27■■□□□ 1.16
SEC13-211ENST00000431352 MROH2AA6NES4 1674 aa22.26■■□□□ 1.15
SEC13-211ENST00000431352 CLTCQ00610 1675 aaKnown RBP22.26■■□□□ 1.15
SEC13-211ENST00000431352 GGT6Q6P531 493 aa22.25■■□□□ 1.15
SEC13-211ENST00000431352 ZMYM3Q14202 1370 aa22.25■■□□□ 1.15
SEC13-211ENST00000431352 ADGBQ8N7X0 1667 aa22.23■■□□□ 1.15
SEC13-211ENST00000431352 MBD5Q9P267 1494 aa22.23■■□□□ 1.15
SEC13-211ENST00000431352 NPATQ14207 1427 aa22.23■■□□□ 1.15
SEC13-211ENST00000431352 NCOA2Q15596 1464 aa22.22■■□□□ 1.15
SEC13-211ENST00000431352 NCOA1Q15788 1441 aa22.2■■□□□ 1.14
SEC13-211ENST00000431352 CAMSAP2Q08AD1 1489 aa22.2■■□□□ 1.14
SEC13-211ENST00000431352 PTPRTO14522 1441 aa22.19■■□□□ 1.14
SEC13-211ENST00000431352 CAMSAP1Q5T5Y3 1602 aa22.19■■□□□ 1.14
SEC13-211ENST00000431352 MYO3AQ8NEV4 1616 aa22.17■■□□□ 1.14
SEC13-211ENST00000431352 CCDC141Q6ZP82 1450 aa22.17■■□□□ 1.14
SEC13-211ENST00000431352 LOC105371045A0A1W2PR82 267 aa22.17■■□□□ 1.14
SEC13-211ENST00000431352 RTEL1-TNFRSF6BF6WH68 1400 aa22.15■■□□□ 1.14
SEC13-211ENST00000431352 PTPRKQ15262 1439 aa22.15■■□□□ 1.14
SEC13-211ENST00000431352 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.13
SEC13-211ENST00000431352 DHX29Q7Z478 1369 aaKnown RBP22.12■■□□□ 1.13
SEC13-211ENST00000431352 CEP170BQ9Y4F5 1589 aaPredicted RBP22.12■■□□□ 1.13
SEC13-211ENST00000431352 ZNF142P52746 1687 aaPredicted RBP22.12■■□□□ 1.13
SEC13-211ENST00000431352 NCKAP5LQ9HCH0 1330 aa22.11■■□□□ 1.13
SEC13-211ENST00000431352 KIF3BO15066 747 aa22.1■■□□□ 1.13
SEC13-211ENST00000431352 LRRC9Q6ZRR7 1453 aa22.09■■□□□ 1.13
SEC13-211ENST00000431352 LTBP4Q8N2S1 1624 aa22.09■■□□□ 1.13
SEC13-211ENST00000431352 PPP6R1Q9UPN7 881 aa22.08■■□□□ 1.13
SEC13-211ENST00000431352 ARHGEF5Q12774 1597 aa22.06■■□□□ 1.12
SEC13-211ENST00000431352 KDM5DQ9BY66 1539 aa22.05■■□□□ 1.12
SEC13-211ENST00000431352 PLA2R1Q13018 1463 aa22.04■■□□□ 1.12
SEC13-211ENST00000431352 RSPH4AQ5TD94 716 aa22.04■■□□□ 1.12
SEC13-211ENST00000431352 TSPY4P0CV99 314 aa22.03■■□□□ 1.12
SEC13-211ENST00000431352 TSPY10P0CW01 314 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms