RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
SMPD4-205ENST00000431183 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
SMPD4-205ENST00000431183 MPHOSPH9Q99550 1183 aa16.18■□□□□ 0.18
SMPD4-205ENST00000431183 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
SMPD4-205ENST00000431183 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
SMPD4-205ENST00000431183 EFCAB2Q5VUJ9 269 aa16.17■□□□□ 0.18
SMPD4-205ENST00000431183 EHBP1L1Q8N3D4 1523 aa16.16■□□□□ 0.18
SMPD4-205ENST00000431183 PKD2Q13563 968 aa16.16■□□□□ 0.18
SMPD4-205ENST00000431183 MLECQ14165 292 aa16.15■□□□□ 0.18
SMPD4-205ENST00000431183 CHGAP10645 457 aaKnown RBP16.14■□□□□ 0.17
SMPD4-205ENST00000431183 FAM69CQ0P6D2 419 aa16.14■□□□□ 0.17
SMPD4-205ENST00000431183 SUPT6HQ7KZ85 1726 aaKnown RBP16.14■□□□□ 0.17
SMPD4-205ENST00000431183 RAPGEF3O95398 923 aa16.13■□□□□ 0.17
SMPD4-205ENST00000431183 GGT6Q6P531 493 aa16.13■□□□□ 0.17
SMPD4-205ENST00000431183 LRRIQ1Q96JM4 1722 aa16.12■□□□□ 0.17
SMPD4-205ENST00000431183 ACIN1Q9UKV3 1341 aaKnown RBP16.12■□□□□ 0.17
SMPD4-205ENST00000431183 NUP155O75694 1391 aa16.11■□□□□ 0.17
SMPD4-205ENST00000431183 KIF14Q15058 1648 aa16.11■□□□□ 0.17
SMPD4-205ENST00000431183 CFAP43Q8NDM7 1665 aa16.1■□□□□ 0.17
SMPD4-205ENST00000431183 DDX10Q13206 875 aaKnown RBP16.09■□□□□ 0.17
SMPD4-205ENST00000431183 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
SMPD4-205ENST00000431183 GPATCH8Q9UKJ3 1502 aaKnown RBP16.09■□□□□ 0.17
SMPD4-205ENST00000431183 ARHGAP5Q13017 1502 aa16.09■□□□□ 0.17
SMPD4-205ENST00000431183 GTF3C3Q9Y5Q9 886 aa16.09■□□□□ 0.17
SMPD4-205ENST00000431183 PTPN23Q9H3S7 1636 aa16.09■□□□□ 0.17
SMPD4-205ENST00000431183 KIF3BO15066 747 aa16.08■□□□□ 0.16
SMPD4-205ENST00000431183 NAIPQ13075 1403 aa16.07■□□□□ 0.16
SMPD4-205ENST00000431183 ABCC5O15440 1437 aa16.07■□□□□ 0.16
SMPD4-205ENST00000431183 SPAG9O60271 1321 aaKnown RBP16.07■□□□□ 0.16
SMPD4-205ENST00000431183 DAPK1P53355 1430 aa16.06■□□□□ 0.16
SMPD4-205ENST00000431183 ANKRD30AQ9BXX3 1397 aa16.05■□□□□ 0.16
SMPD4-205ENST00000431183 CAMSAP2Q08AD1 1489 aa16.04■□□□□ 0.16
SMPD4-205ENST00000431183 L3MBTL2Q969R5 705 aa16.04■□□□□ 0.16
SMPD4-205ENST00000431183 KIF15Q9NS87 1388 aa16.03■□□□□ 0.16
SMPD4-205ENST00000431183 MIER1Q8N108 512 aa16.02■□□□□ 0.16
SMPD4-205ENST00000431183 NUTM2DQ5VT03 806 aaPredicted RBP16■□□□□ 0.15
SMPD4-205ENST00000431183 ASXL2Q76L83 1435 aa15.99■□□□□ 0.15
SMPD4-205ENST00000431183 SCAPERQ9BY12 1400 aa15.99■□□□□ 0.15
SMPD4-205ENST00000431183 DCAF11Q8TEB1 546 aa15.99■□□□□ 0.15
SMPD4-205ENST00000431183 HFM1A2PYH4 1435 aa15.99■□□□□ 0.15
SMPD4-205ENST00000431183 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
SMPD4-205ENST00000431183 C9orf84Q5VXU9 1444 aa15.98■□□□□ 0.15
SMPD4-205ENST00000431183 ABCA8O94911 1581 aa15.98■□□□□ 0.15
SMPD4-205ENST00000431183 SENP3-EIF4A1A0A087X0R7 540 aa15.98■□□□□ 0.15
SMPD4-205ENST00000431183 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
SMPD4-205ENST00000431183 ANKRD50Q9ULJ7 1429 aa15.98■□□□□ 0.15
SMPD4-205ENST00000431183 ARID4BQ4LE39 1312 aaPredicted RBP15.97■□□□□ 0.15
SMPD4-205ENST00000431183 PPP1R15AO75807 674 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-205ENST00000431183 ABCC2Q92887 1545 aa15.95■□□□□ 0.14
SMPD4-205ENST00000431183 NCOA1Q15788 1441 aa15.93■□□□□ 0.14
SMPD4-205ENST00000431183 TRAPPC8Q9Y2L5 1435 aa15.92■□□□□ 0.14
SMPD4-205ENST00000431183 KDM6BO15054 1643 aa15.92■□□□□ 0.14
SMPD4-205ENST00000431183 SYCP2Q9BX26 1530 aa15.91■□□□□ 0.14
SMPD4-205ENST00000431183 CLASP1Q7Z460 1538 aa15.9■□□□□ 0.14
SMPD4-205ENST00000431183 CD109Q6YHK3 1445 aa15.9■□□□□ 0.14
SMPD4-205ENST00000431183 CLSPNQ9HAW4 1339 aa15.89■□□□□ 0.13
SMPD4-205ENST00000431183 MAPKBP1O60336 1514 aa15.88■□□□□ 0.13
SMPD4-205ENST00000431183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.87■□□□□ 0.134e-10■■■■■ 33.4
SMPD4-205ENST00000431183 TTC37Q6PGP7 1564 aa15.87■□□□□ 0.13
SMPD4-205ENST00000431183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.86■□□□□ 0.131e-6■■■■□ 23.9
SMPD4-205ENST00000431183 AKNAQ7Z591 1439 aa15.86■□□□□ 0.13
SMPD4-205ENST00000431183 FANCAO15360 1455 aa15.86■□□□□ 0.13
SMPD4-205ENST00000431183 PLEKHH2Q8IVE3 1493 aa15.86■□□□□ 0.13
SMPD4-205ENST00000431183 WDR7Q9Y4E6 1490 aa15.86■□□□□ 0.13
SMPD4-205ENST00000431183 NBPF8Q3BBV2 869 aa15.86■□□□□ 0.13
SMPD4-205ENST00000431183 ABCC10Q5T3U5 1492 aa15.86■□□□□ 0.13
SMPD4-205ENST00000431183 HSPA5P11021 654 aaKnown RBP15.85■□□□□ 0.13
SMPD4-205ENST00000431183 RSPH4AQ5TD94 716 aa15.85■□□□□ 0.13
SMPD4-205ENST00000431183 BCANQ96GW7 911 aa15.84■□□□□ 0.13
SMPD4-205ENST00000431183 WASHC2CQ9Y4E1 1318 aa15.84■□□□□ 0.13
SMPD4-205ENST00000431183 ESF1Q9H501 851 aaKnown RBP15.83■□□□□ 0.13
SMPD4-205ENST00000431183 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.13
SMPD4-205ENST00000431183 PLCH2O75038 1416 aa15.83■□□□□ 0.13
SMPD4-205ENST00000431183 ADGRL1O94910 1474 aa15.82■□□□□ 0.12
SMPD4-205ENST00000431183 ZCCHC11Q5TAX3 1644 aaKnown RBP15.82■□□□□ 0.12
SMPD4-205ENST00000431183 CCDC141Q6ZP82 1450 aa15.82■□□□□ 0.12
SMPD4-205ENST00000431183 CARD11Q9BXL7 1154 aa15.82■□□□□ 0.12
SMPD4-205ENST00000431183 TCOF1Q13428 1488 aaKnown RBP15.82■□□□□ 0.12
SMPD4-205ENST00000431183 EIF4G2P78344 907 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMPD4-205ENST00000431183 ADCY10Q96PN6 1610 aa15.81■□□□□ 0.12
SMPD4-205ENST00000431183 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
SMPD4-205ENST00000431183 KDM5BQ9UGL1 1544 aa15.8■□□□□ 0.12
SMPD4-205ENST00000431183 SAFB2Q14151 953 aaKnown RBP eCLIP15.79■□□□□ 0.12
SMPD4-205ENST00000431183 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
SMPD4-205ENST00000431183 MBD5Q9P267 1494 aa15.76■□□□□ 0.11
SMPD4-205ENST00000431183 ROCK1Q13464 1354 aa15.76■□□□□ 0.11
SMPD4-205ENST00000431183 NBPF1Q3BBV0 1214 aa15.75■□□□□ 0.11
SMPD4-205ENST00000431183 CDC42BPAQ5VT25 1732 aa15.75■□□□□ 0.11
SMPD4-205ENST00000431183 SAMD9LQ8IVG5 1584 aa15.75■□□□□ 0.11
SMPD4-205ENST00000431183 ANKRD30BQ9BXX2 1392 aa15.73■□□□□ 0.11
SMPD4-205ENST00000431183 DNMT1P26358 1616 aaKnown RBP15.73■□□□□ 0.11
SMPD4-205ENST00000431183 ITSN2Q9NZM3 1697 aa15.72■□□□□ 0.11
SMPD4-205ENST00000431183 CCDC144AA2RUR9 1427 aa15.71■□□□□ 0.11
SMPD4-205ENST00000431183 ANP32CO43423 234 aa15.71■□□□□ 0.11
SMPD4-205ENST00000431183 KANK1Q14678 1352 aa15.71■□□□□ 0.11
SMPD4-205ENST00000431183 FBXO31Q5XUX0 539 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-205ENST00000431183 STK26Q9P289 416 aa15.7■□□□□ 0.1
SMPD4-205ENST00000431183 ST20-MTHFSA0A0A6YYL1 179 aa15.7■□□□□ 0.1
SMPD4-205ENST00000431183 C11orf95C9JLR9 678 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-205ENST00000431183 TSPOAP1O95153 1857 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms