RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 MADDQ8WXG6 1647 aa22.22■■□□□ 1.15
GCSHP3-201ENST00000431120 CLIP1P30622 1438 aa22.22■■□□□ 1.15
GCSHP3-201ENST00000431120 YEATS2Q9ULM3 1422 aa22.19■■□□□ 1.14
GCSHP3-201ENST00000431120 KIF14Q15058 1648 aa22.19■■□□□ 1.14
GCSHP3-201ENST00000431120 MYO5CQ9NQX4 1742 aa22.19■■□□□ 1.14
GCSHP3-201ENST00000431120 CASKIN1Q8WXD9 1431 aa22.14■■□□□ 1.14
GCSHP3-201ENST00000431120 PCF11O94913 1555 aaKnown RBP22.14■■□□□ 1.13
GCSHP3-201ENST00000431120 ATP10AO60312 1499 aa22.14■■□□□ 1.13
GCSHP3-201ENST00000431120 CCDC18Q5T9S5 1454 aa22.14■■□□□ 1.13
GCSHP3-201ENST00000431120 ZNF518AQ6AHZ1 1483 aa22.14■■□□□ 1.13
GCSHP3-201ENST00000431120 RIMS1Q86UR5 1692 aaKnown RBP22.12■■□□□ 1.13
GCSHP3-201ENST00000431120 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
GCSHP3-201ENST00000431120 LMTK3Q96Q04 1460 aa22.11■■□□□ 1.13
GCSHP3-201ENST00000431120 C9orf84Q5VXU9 1444 aa22.11■■□□□ 1.13
GCSHP3-201ENST00000431120 KDM5CP41229 1560 aa22.08■■□□□ 1.12
GCSHP3-201ENST00000431120 LRRIQ1Q96JM4 1722 aa22.07■■□□□ 1.12
GCSHP3-201ENST00000431120 SIGLEC1Q9BZZ2 1709 aa22.06■■□□□ 1.12
GCSHP3-201ENST00000431120 FYCO1Q9BQS8 1478 aa22.05■■□□□ 1.12
GCSHP3-201ENST00000431120 MLECQ14165 292 aa22.05■■□□□ 1.12
GCSHP3-201ENST00000431120 AFAP1Q8N556 730 aa22.05■■□□□ 1.12
GCSHP3-201ENST00000431120 ARHGEF12Q9NZN5 1544 aa22.04■■□□□ 1.12
GCSHP3-201ENST00000431120 MLH3Q9UHC1 1453 aa22.03■■□□□ 1.12
GCSHP3-201ENST00000431120 FER1L4A9Z1Z3 1794 aa22.02■■□□□ 1.11
GCSHP3-201ENST00000431120 CDC42BPBQ9Y5S2 1711 aa22.01■■□□□ 1.11
GCSHP3-201ENST00000431120 PREX2Q70Z35 1606 aa22.01■■□□□ 1.11
GCSHP3-201ENST00000431120 REREQ9P2R6 1566 aa22■■□□□ 1.11
GCSHP3-201ENST00000431120 FBXO41Q8TF61 875 aa22■■□□□ 1.11
GCSHP3-201ENST00000431120 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
GCSHP3-201ENST00000431120 ABCC1P33527 1531 aa21.97■■□□□ 1.11
GCSHP3-201ENST00000431120 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
GCSHP3-201ENST00000431120 DIP2CQ9Y2E4 1556 aa21.95■■□□□ 1.11
GCSHP3-201ENST00000431120 TRAPPC8Q9Y2L5 1435 aa21.95■■□□□ 1.1
GCSHP3-201ENST00000431120 HSPA2P54652 639 aa21.94■■□□□ 1.1
GCSHP3-201ENST00000431120 AGLP35573 1532 aa21.94■■□□□ 1.1
GCSHP3-201ENST00000431120 CDC42BPAQ5VT25 1732 aa21.91■■□□□ 1.1
GCSHP3-201ENST00000431120 ITSN2Q9NZM3 1697 aa21.91■■□□□ 1.1
GCSHP3-201ENST00000431120 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
GCSHP3-201ENST00000431120 SETD1BQ9UPS6 1966 aaKnown RBP21.89■■□□□ 1.09
GCSHP3-201ENST00000431120 GPATCH8Q9UKJ3 1502 aaKnown RBP21.89■■□□□ 1.09
GCSHP3-201ENST00000431120 CEBPAP49715 358 aaPredicted RBP21.87■■□□□ 1.09
GCSHP3-201ENST00000431120 ESF1Q9H501 851 aaKnown RBP21.87■■□□□ 1.09
GCSHP3-201ENST00000431120 PLEKHH2Q8IVE3 1493 aa21.87■■□□□ 1.09
GCSHP3-201ENST00000431120 PREX1Q8TCU6 1659 aa21.87■■□□□ 1.09
GCSHP3-201ENST00000431120 KIAA1107Q9UPP5 1409 aa21.87■■□□□ 1.09
GCSHP3-201ENST00000431120 KIDINS220Q9ULH0 1771 aa21.85■■□□□ 1.09
GCSHP3-201ENST00000431120 ZNF777Q9ULD5 760 aaPredicted RBP21.85■■□□□ 1.09
GCSHP3-201ENST00000431120 UHRF1BP1Q6BDS2 1440 aa21.84■■□□□ 1.09
GCSHP3-201ENST00000431120 CNTLNQ9NXG0 1405 aa21.84■■□□□ 1.09
GCSHP3-201ENST00000431120 CFDP1Q9UEE9 299 aaPredicted RBP21.84■■□□□ 1.09
GCSHP3-201ENST00000431120 MTUS2Q5JR59 1369 aa21.84■■□□□ 1.09
GCSHP3-201ENST00000431120 SAMD9LQ8IVG5 1584 aa21.83■■□□□ 1.09
GCSHP3-201ENST00000431120 DMRT2Q9Y5R5 561 aa21.83■■□□□ 1.09
GCSHP3-201ENST00000431120 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.08
GCSHP3-201ENST00000431120 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
GCSHP3-201ENST00000431120 SYCP2Q9BX26 1530 aa21.8■■□□□ 1.08
GCSHP3-201ENST00000431120 HNRNPMP52272 730 aaKnown RBP eCLIP21.79■■□□□ 1.08
GCSHP3-201ENST00000431120 CERKQ8TCT0 537 aa21.76■■□□□ 1.07
GCSHP3-201ENST00000431120 C3P01024 1663 aa21.75■■□□□ 1.07
GCSHP3-201ENST00000431120 ATP7AQ04656 1500 aa21.75■■□□□ 1.07
GCSHP3-201ENST00000431120 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
GCSHP3-201ENST00000431120 CEP162Q5TB80 1403 aa21.73■■□□□ 1.07
GCSHP3-201ENST00000431120 NPATQ14207 1427 aa21.72■■□□□ 1.07
GCSHP3-201ENST00000431120 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
GCSHP3-201ENST00000431120 INO80Q9ULG1 1556 aaPredicted RBP21.71■■□□□ 1.07
GCSHP3-201ENST00000431120 MROH2AA6NES4 1674 aa21.71■■□□□ 1.07
GCSHP3-201ENST00000431120 A2MP01023 1474 aa21.71■■□□□ 1.07
GCSHP3-201ENST00000431120 PLXNC1O60486 1568 aa21.7■■□□□ 1.06
GCSHP3-201ENST00000431120 ZMYM3Q14202 1370 aa21.69■■□□□ 1.06
GCSHP3-201ENST00000431120 PTPRTO14522 1441 aa21.69■■□□□ 1.06
GCSHP3-201ENST00000431120 TIAM1Q13009 1591 aa21.69■■□□□ 1.06
GCSHP3-201ENST00000431120 STRCQ7RTU9 1775 aa21.69■■□□□ 1.06
GCSHP3-201ENST00000431120 RTEL1-TNFRSF6BF6WH68 1400 aa21.68■■□□□ 1.06
GCSHP3-201ENST00000431120 MBD5Q9P267 1494 aa21.67■■□□□ 1.06
GCSHP3-201ENST00000431120 RSPH4AQ5TD94 716 aa21.66■■□□□ 1.06
GCSHP3-201ENST00000431120 SUPT6HQ7KZ85 1726 aaKnown RBP21.65■■□□□ 1.06
GCSHP3-201ENST00000431120 ZNF644Q9H582 1327 aaPredicted RBP21.64■■□□□ 1.05
GCSHP3-201ENST00000431120 ADGBQ8N7X0 1667 aa21.63■■□□□ 1.05
GCSHP3-201ENST00000431120 GGT6Q6P531 493 aa21.62■■□□□ 1.05
GCSHP3-201ENST00000431120 NCOA1Q15788 1441 aa21.62■■□□□ 1.05
GCSHP3-201ENST00000431120 NCOA2Q15596 1464 aa21.6■■□□□ 1.05
GCSHP3-201ENST00000431120 DHX29Q7Z478 1369 aaKnown RBP21.6■■□□□ 1.05
GCSHP3-201ENST00000431120 CCDC141Q6ZP82 1450 aa21.58■■□□□ 1.04
GCSHP3-201ENST00000431120 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
GCSHP3-201ENST00000431120 PTPRKQ15262 1439 aa21.56■■□□□ 1.04
GCSHP3-201ENST00000431120 VPS8Q8N3P4 1428 aa21.55■■□□□ 1.04
GCSHP3-201ENST00000431120 CAMSAP2Q08AD1 1489 aa21.54■■□□□ 1.04
GCSHP3-201ENST00000431120 CAMSAP1Q5T5Y3 1602 aa21.54■■□□□ 1.04
GCSHP3-201ENST00000431120 FAM135AQ9P2D6 1515 aa21.54■■□□□ 1.04
GCSHP3-201ENST00000431120 PLA2R1Q13018 1463 aa21.53■■□□□ 1.04
GCSHP3-201ENST00000431120 PKD2Q13563 968 aa21.53■■□□□ 1.04
GCSHP3-201ENST00000431120 ZNF142P52746 1687 aaPredicted RBP21.52■■□□□ 1.04
GCSHP3-201ENST00000431120 IQSEC2Q5JU85 1478 aa21.52■■□□□ 1.03
GCSHP3-201ENST00000431120 TSPY4P0CV99 314 aa21.51■■□□□ 1.03
GCSHP3-201ENST00000431120 TSPY10P0CW01 314 aa21.51■■□□□ 1.03
GCSHP3-201ENST00000431120 ARHGEF5Q12774 1597 aa21.5■■□□□ 1.03
GCSHP3-201ENST00000431120 KIF3BO15066 747 aa21.5■■□□□ 1.03
GCSHP3-201ENST00000431120 MYO3AQ8NEV4 1616 aa21.5■■□□□ 1.03
GCSHP3-201ENST00000431120 LRRC9Q6ZRR7 1453 aa21.5■■□□□ 1.03
GCSHP3-201ENST00000431120 MAP3K1Q13233 1512 aa21.5■■□□□ 1.03
GCSHP3-201ENST00000431120 LTBP4Q8N2S1 1624 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms