RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 POGZQ7Z3K3 1410 aa15.61■□□□□ 0.09
HDAC6-207ENST00000430858 VPS8Q8N3P4 1428 aa15.61■□□□□ 0.09
HDAC6-207ENST00000430858 RICTORQ6R327 1708 aa15.61■□□□□ 0.09
HDAC6-207ENST00000430858 MAGI2Q86UL8 1455 aa15.59■□□□□ 0.09
HDAC6-207ENST00000430858 ZMYM4Q5VZL5 1548 aa15.59■□□□□ 0.09
HDAC6-207ENST00000430858 PREX2Q70Z35 1606 aa15.58■□□□□ 0.09
HDAC6-207ENST00000430858 ZNF518AQ6AHZ1 1483 aa15.57■□□□□ 0.08
HDAC6-207ENST00000430858 EHBP1L1Q8N3D4 1523 aa15.57■□□□□ 0.08
HDAC6-207ENST00000430858 ARHGEF40Q8TER5 1519 aa15.57■□□□□ 0.08
HDAC6-207ENST00000430858 GPATCH8Q9UKJ3 1502 aaKnown RBP15.57■□□□□ 0.08
HDAC6-207ENST00000430858 CCNB3Q8WWL7 1395 aa15.56■□□□□ 0.08
HDAC6-207ENST00000430858 CDC42BPBQ9Y5S2 1711 aa15.56■□□□□ 0.08
HDAC6-207ENST00000430858 ZFYVE16Q7Z3T8 1539 aa15.55■□□□□ 0.08
HDAC6-207ENST00000430858 YEATS2Q9ULM3 1422 aa15.54■□□□□ 0.08
HDAC6-207ENST00000430858 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-207ENST00000430858 CFDP1Q9UEE9 299 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-207ENST00000430858 AFAP1Q8N556 730 aa15.53■□□□□ 0.08
HDAC6-207ENST00000430858 ZNF777Q9ULD5 760 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-207ENST00000430858 CDC42BPAQ5VT25 1732 aa15.53■□□□□ 0.08
HDAC6-207ENST00000430858 ABCC1P33527 1531 aa15.53■□□□□ 0.08
HDAC6-207ENST00000430858 TIAM1Q13009 1591 aa15.52■□□□□ 0.07
HDAC6-207ENST00000430858 KDM5CP41229 1560 aa15.51■□□□□ 0.07
HDAC6-207ENST00000430858 ARHGEF12Q9NZN5 1544 aa15.51■□□□□ 0.07
HDAC6-207ENST00000430858 MAP3K1Q13233 1512 aa15.5■□□□□ 0.07
HDAC6-207ENST00000430858 MYT1LQ9UL68 1186 aa15.5■□□□□ 0.07
HDAC6-207ENST00000430858 TRAPPC8Q9Y2L5 1435 aa15.5■□□□□ 0.07
HDAC6-207ENST00000430858 ATP10AO60312 1499 aa15.49■□□□□ 0.07
HDAC6-207ENST00000430858 PLEKHH2Q8IVE3 1493 aa15.49■□□□□ 0.07
HDAC6-207ENST00000430858 MLH3Q9UHC1 1453 aa15.49■□□□□ 0.07
HDAC6-207ENST00000430858 KIAA1107Q9UPP5 1409 aa15.49■□□□□ 0.07
HDAC6-207ENST00000430858 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
HDAC6-207ENST00000430858 SAMD9LQ8IVG5 1584 aa15.48■□□□□ 0.07
HDAC6-207ENST00000430858 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
HDAC6-207ENST00000430858 C9orf84Q5VXU9 1444 aa15.47■□□□□ 0.07
HDAC6-207ENST00000430858 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.07
HDAC6-207ENST00000430858 HECW2Q9P2P5 1572 aa15.46■□□□□ 0.07
HDAC6-207ENST00000430858 HNRNPMP52272 730 aaKnown RBP eCLIP15.46■□□□□ 0.07
HDAC6-207ENST00000430858 APLP2Q06481 763 aa15.46■□□□□ 0.07
HDAC6-207ENST00000430858 ITSN2Q9NZM3 1697 aa15.46■□□□□ 0.07
HDAC6-207ENST00000430858 BCORL1Q5H9F3 1711 aa15.46■□□□□ 0.06
HDAC6-207ENST00000430858 ADAMTSL3P82987 1691 aa15.45■□□□□ 0.06
HDAC6-207ENST00000430858 SYCP2Q9BX26 1530 aa15.45■□□□□ 0.06
HDAC6-207ENST00000430858 KANK4Q5T7N3 995 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-207ENST00000430858 SPAG9O60271 1321 aaKnown RBP15.43■□□□□ 0.06
HDAC6-207ENST00000430858 ZNF644Q9H582 1327 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-207ENST00000430858 DIP2CQ9Y2E4 1556 aa15.41■□□□□ 0.06
HDAC6-207ENST00000430858 PTPRMP28827 1452 aa15.41■□□□□ 0.06
HDAC6-207ENST00000430858 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
HDAC6-207ENST00000430858 MLECQ14165 292 aa15.4■□□□□ 0.06
HDAC6-207ENST00000430858 SIGLEC1Q9BZZ2 1709 aa15.4■□□□□ 0.06
HDAC6-207ENST00000430858 MBD5Q9P267 1494 aa15.4■□□□□ 0.06
HDAC6-207ENST00000430858 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
HDAC6-207ENST00000430858 ABCA6Q8N139 1617 aa15.39■□□□□ 0.05
HDAC6-207ENST00000430858 MADDQ8WXG6 1647 aa15.39■□□□□ 0.05
HDAC6-207ENST00000430858 KIDINS220Q9ULH0 1771 aa15.38■□□□□ 0.05
HDAC6-207ENST00000430858 CAMSAP2Q08AD1 1489 aa15.37■□□□□ 0.05
HDAC6-207ENST00000430858 AGLP35573 1532 aa15.37■□□□□ 0.05
HDAC6-207ENST00000430858 ATP7AQ04656 1500 aa15.36■□□□□ 0.05
HDAC6-207ENST00000430858 RTEL1-TNFRSF6BF6WH68 1400 aa15.35■□□□□ 0.05
HDAC6-207ENST00000430858 MIA2Q96PC5 1412 aa15.35■□□□□ 0.05
HDAC6-207ENST00000430858 MYOM3Q5VTT5 1437 aa15.34■□□□□ 0.05
HDAC6-207ENST00000430858 INO80Q9ULG1 1556 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-207ENST00000430858 CCDC141Q6ZP82 1450 aa15.33■□□□□ 0.05
HDAC6-207ENST00000430858 RIMS1Q86UR5 1692 aaKnown RBP15.33■□□□□ 0.04
HDAC6-207ENST00000430858 A2MP01023 1474 aa15.32■□□□□ 0.04
HDAC6-207ENST00000430858 TSPY4P0CV99 314 aa15.31■□□□□ 0.04
HDAC6-207ENST00000430858 TSPY10P0CW01 314 aa15.31■□□□□ 0.04
HDAC6-207ENST00000430858 FER1L4A9Z1Z3 1794 aa15.3■□□□□ 0.04
HDAC6-207ENST00000430858 ARHGEF5Q12774 1597 aa15.3■□□□□ 0.04
HDAC6-207ENST00000430858 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
HDAC6-207ENST00000430858 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
HDAC6-207ENST00000430858 PLPPR3Q6T4P5 718 aa15.28■□□□□ 0.04
HDAC6-207ENST00000430858 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
HDAC6-207ENST00000430858 DHX29Q7Z478 1369 aaKnown RBP15.26■□□□□ 0.03
HDAC6-207ENST00000430858 ADGBQ8N7X0 1667 aa15.25■□□□□ 0.03
HDAC6-207ENST00000430858 CEBPAP49715 358 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-207ENST00000430858 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
HDAC6-207ENST00000430858 FGD6Q6ZV73 1430 aa15.24■□□□□ 0.03
HDAC6-207ENST00000430858 GGT6Q6P531 493 aa15.23■□□□□ 0.03
HDAC6-207ENST00000430858 LMTK3Q96Q04 1460 aa15.22■□□□□ 0.03
HDAC6-207ENST00000430858 MAST1Q9Y2H9 1570 aa15.22■□□□□ 0.03
HDAC6-207ENST00000430858 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.03
HDAC6-207ENST00000430858 TCOF1Q13428 1488 aaKnown RBP15.21■□□□□ 0.03
HDAC6-207ENST00000430858 KIF3BO15066 747 aa15.2■□□□□ 0.02
HDAC6-207ENST00000430858 ABCC5O15440 1437 aa15.19■□□□□ 0.02
HDAC6-207ENST00000430858 ZMYM3Q14202 1370 aa15.19■□□□□ 0.02
HDAC6-207ENST00000430858 SHANK2Q9UPX8 1470 aa15.18■□□□□ 0.02
HDAC6-207ENST00000430858 DAPK1P53355 1430 aa15.17■□□□□ 0.02
HDAC6-207ENST00000430858 C3P01024 1663 aa15.16■□□□□ 0.02
HDAC6-207ENST00000430858 UHRF1BP1Q6BDS2 1440 aa15.16■□□□□ 0.02
HDAC6-207ENST00000430858 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
HDAC6-207ENST00000430858 HSPA2P54652 639 aa15.15■□□□□ 0.02
HDAC6-207ENST00000430858 NPATQ14207 1427 aa15.15■□□□□ 0.02
HDAC6-207ENST00000430858 DNMT1P26358 1616 aaKnown RBP15.14■□□□□ 0.01
HDAC6-207ENST00000430858 FAM135AQ9P2D6 1515 aa15.14■□□□□ 0.01
HDAC6-207ENST00000430858 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
HDAC6-207ENST00000430858 KIF15Q9NS87 1388 aa15.13■□□□□ 0.01
HDAC6-207ENST00000430858 DUOX2Q9NRD8 1548 aa15.13■□□□□ 0.01
HDAC6-207ENST00000430858 PREX1Q8TCU6 1659 aa15.13■□□□□ 0.01
HDAC6-207ENST00000430858 WASHC2CQ9Y4E1 1318 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms