RNA–Protein interactions for RNA: ENST00000430799.7

ARID1A-204, Transcript of AT-rich interaction domain 1A, human

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-204	ENST00000430799	HSPA5	P11021	654 aa	Known RBP	13.99	□□□□□ -0.17
ARID1A-204	ENST00000430799	SENP3-EIF4A1	A0A087X0R7	540 aa		13.99	□□□□□ -0.17
ARID1A-204	ENST00000430799	MCC	P23508	829 aa		13.99	□□□□□ -0.17
ARID1A-204	ENST00000430799	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.98	□□□□□ -0.17
ARID1A-204	ENST00000430799	HSCB	Q8IWL3	235 aa		13.98	□□□□□ -0.17
ARID1A-204	ENST00000430799	ANKRD30A	Q9BXX3	1397 aa		13.98	□□□□□ -0.17
ARID1A-204	ENST00000430799	RSPH4A	Q5TD94	716 aa		13.98	□□□□□ -0.17
ARID1A-204	ENST00000430799	RTF1	Q92541	710 aa	Known RBP	13.96	□□□□□ -0.17
ARID1A-204	ENST00000430799	NPHP1	O15259	732 aa		13.96	□□□□□ -0.18
ARID1A-204	ENST00000430799	GOLGA6L4	A6NEF3	574 aa		13.95	□□□□□ -0.18
ARID1A-204	ENST00000430799	B4GALNT3	Q6L9W6	998 aa		13.95	□□□□□ -0.18
ARID1A-204	ENST00000430799	GOLGA2	Q08379	1002 aa		13.94	□□□□□ -0.18
ARID1A-204	ENST00000430799	GGT6	Q6P531	493 aa		13.94	□□□□□ -0.18
ARID1A-204	ENST00000430799	NUP155	O75694	1391 aa		13.93	□□□□□ -0.18
ARID1A-204	ENST00000430799	SMARCA2	P51531	1590 aa		13.93	□□□□□ -0.18
ARID1A-204	ENST00000430799	MPHOSPH9	Q99550	1183 aa		13.93	□□□□□ -0.18
ARID1A-204	ENST00000430799	EIF3A	Q14152	1382 aa	Known RBP	13.93	□□□□□ -0.18
ARID1A-204	ENST00000430799	HDAC5	Q9UQL6	1122 aa		13.91	□□□□□ -0.18
ARID1A-204	ENST00000430799	RWDD1	Q9H446	243 aa	Predicted RBP	13.9	□□□□□ -0.18
ARID1A-204	ENST00000430799	CCDC88B	A6NC98	1476 aa		13.9	□□□□□ -0.18
ARID1A-204	ENST00000430799	L1TD1	Q5T7N2	865 aa	Known RBP	13.9	□□□□□ -0.18
ARID1A-204	ENST00000430799	KANK4	Q5T7N3	995 aa	Predicted RBP	13.9	□□□□□ -0.18
ARID1A-204	ENST00000430799	ROCK2	O75116	1388 aa	Known RBP	13.9	□□□□□ -0.18
ARID1A-204	ENST00000430799	RAB3GAP2	Q9H2M9	1393 aa		13.89	□□□□□ -0.19
ARID1A-204	ENST00000430799	MLEC	Q14165	292 aa		13.89	□□□□□ -0.19
ARID1A-204	ENST00000430799	PTMS	P20962	102 aa		13.89	□□□□□ -0.19
ARID1A-204	ENST00000430799	PLCB2	Q00722	1185 aa		13.89	□□□□□ -0.19
ARID1A-204	ENST00000430799	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.89	□□□□□ -0.19
ARID1A-204	ENST00000430799	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	3e-7	■■■□□ 17
ARID1A-204	ENST00000430799	RCAN3	Q9UKA8	241 aa		13.88	□□□□□ -0.19
ARID1A-204	ENST00000430799	PDE3B	Q13370	1112 aa		13.87	□□□□□ -0.19
ARID1A-204	ENST00000430799	TCERG1	O14776	1098 aa	Known RBP	13.87	□□□□□ -0.19
ARID1A-204	ENST00000430799	TERF2IP	Q9NYB0	399 aa		13.87	□□□□□ -0.19
ARID1A-204	ENST00000430799	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
ARID1A-204	ENST00000430799	TDRD9	Q8NDG6	1382 aa	Known RBP	13.86	□□□□□ -0.19
ARID1A-204	ENST00000430799	KIAA1211	Q6ZU35	1233 aa		13.86	□□□□□ -0.19
ARID1A-204	ENST00000430799	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.86	□□□□□ -0.19
ARID1A-204	ENST00000430799	CHAF1A	Q13111	956 aa	Predicted RBP	13.85	□□□□□ -0.19
ARID1A-204	ENST00000430799	NLRP13	Q86W25	1043 aa		13.85	□□□□□ -0.19
ARID1A-204	ENST00000430799	SOX12	O15370	315 aa		13.84	□□□□□ -0.19
ARID1A-204	ENST00000430799	STK26	Q9P289	416 aa		13.84	□□□□□ -0.19
ARID1A-204	ENST00000430799	MROH2B	Q7Z745	1585 aa		13.84	□□□□□ -0.19
ARID1A-204	ENST00000430799	TPRN	Q4KMQ1	711 aa		13.84	□□□□□ -0.19
ARID1A-204	ENST00000430799	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.83	□□□□□ -0.19
ARID1A-204	ENST00000430799	TRH	P20396	242 aa	Predicted RBP	13.83	□□□□□ -0.2
ARID1A-204	ENST00000430799	PMFBP1	Q8TBY8	1022 aa		13.83	□□□□□ -0.2
ARID1A-204	ENST00000430799	GBP4	Q96PP9	640 aa		13.83	□□□□□ -0.2
ARID1A-204	ENST00000430799	PHLDB1	Q86UU1	1377 aa		13.83	□□□□□ -0.2
ARID1A-204	ENST00000430799	STK31	Q9BXU1	1019 aa		13.83	□□□□□ -0.2
ARID1A-204	ENST00000430799	SPAG9	O60271	1321 aa	Known RBP	13.83	□□□□□ -0.2
ARID1A-204	ENST00000430799	HTATSF1	O43719	755 aa	Known RBP	13.82	□□□□□ -0.2
ARID1A-204	ENST00000430799	LMOD3	Q0VAK6	560 aa		13.82	□□□□□ -0.2
ARID1A-204	ENST00000430799	KIF3B	O15066	747 aa		13.81	□□□□□ -0.2
ARID1A-204	ENST00000430799	HMMR	O75330	724 aa		13.81	□□□□□ -0.2
ARID1A-204	ENST00000430799	CCDC18	Q5T9S5	1454 aa		13.81	□□□□□ -0.2
ARID1A-204	ENST00000430799	RAPGEF2	Q9Y4G8	1499 aa		13.81	□□□□□ -0.2
ARID1A-204	ENST00000430799	CADPS	Q9ULU8	1353 aa		13.81	□□□□□ -0.2
ARID1A-204	ENST00000430799	L3MBTL2	Q969R5	705 aa		13.8	□□□□□ -0.2
ARID1A-204	ENST00000430799	FOXD1	Q16676	465 aa		13.8	□□□□□ -0.2
ARID1A-204	ENST00000430799	ITPRIP	Q8IWB1	547 aa		13.79	□□□□□ -0.2
ARID1A-204	ENST00000430799	MSN	P26038	577 aa	Known RBP	13.79	□□□□□ -0.2
ARID1A-204	ENST00000430799	RBM19	Q9Y4C8	960 aa	Known RBP	13.78	□□□□□ -0.2
ARID1A-204	ENST00000430799	CSB-PGBD3	P0DP91	1061 aa		13.77	□□□□□ -0.2
ARID1A-204	ENST00000430799	EID1	Q9Y6B2	187 aa		13.77	□□□□□ -0.2
ARID1A-204	ENST00000430799	SYAP1	Q96A49	352 aa	Predicted RBP	13.76	□□□□□ -0.21
ARID1A-204	ENST00000430799	GNL2	Q13823	731 aa	Known RBP	13.76	□□□□□ -0.21
ARID1A-204	ENST00000430799	PAK3	O75914	559 aa	Predicted RBP	13.75	□□□□□ -0.21
ARID1A-204	ENST00000430799	CCDC34	Q96HJ3	373 aa		13.75	□□□□□ -0.21
ARID1A-204	ENST00000430799	GPATCH3	Q96I76	525 aa		13.75	□□□□□ -0.21
ARID1A-204	ENST00000430799	SMC4	Q9NTJ3	1288 aa		13.75	□□□□□ -0.21
ARID1A-204	ENST00000430799	TAOK2	Q9UL54	1235 aa		13.75	□□□□□ -0.21
ARID1A-204	ENST00000430799	WASHC2C	Q9Y4E1	1318 aa		13.74	□□□□□ -0.21
ARID1A-204	ENST00000430799	ABCC8	Q09428	1581 aa		13.74	□□□□□ -0.21
ARID1A-204	ENST00000430799	TOP2A	P11388	1531 aa	Known RBP	13.74	□□□□□ -0.21
ARID1A-204	ENST00000430799	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.74	□□□□□ -0.21
ARID1A-204	ENST00000430799	TULP1	O00294	542 aa	Predicted RBP	13.73	□□□□□ -0.21
ARID1A-204	ENST00000430799	UACA	Q9BZF9	1416 aa		13.73	□□□□□ -0.21
ARID1A-204	ENST00000430799	APBB1	O00213	710 aa		13.73	□□□□□ -0.21
ARID1A-204	ENST00000430799	JPH4	Q96JJ6	628 aa		13.72	□□□□□ -0.21
ARID1A-204	ENST00000430799	KIF15	Q9NS87	1388 aa		13.72	□□□□□ -0.21
ARID1A-204	ENST00000430799	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	3e-7	■■■■■ 27
ARID1A-204	ENST00000430799	DRC7	Q8IY82	874 aa		13.72	□□□□□ -0.21
ARID1A-204	ENST00000430799	FHOD3	Q2V2M9	1422 aa		13.72	□□□□□ -0.21
ARID1A-204	ENST00000430799	KIAA2012	Q0VF49	1180 aa		13.71	□□□□□ -0.21
ARID1A-204	ENST00000430799	NGEF	Q8N5V2	710 aa		13.71	□□□□□ -0.21
ARID1A-204	ENST00000430799	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.7	□□□□□ -0.22
ARID1A-204	ENST00000430799	NGDN	Q8NEJ9	315 aa	Known RBP	13.7	□□□□□ -0.22
ARID1A-204	ENST00000430799	CCDC144A	A2RUR9	1427 aa		13.7	□□□□□ -0.22
ARID1A-204	ENST00000430799	GORAB	Q5T7V8	394 aa		13.7	□□□□□ -0.22
ARID1A-204	ENST00000430799	CSPP1	Q1MSJ5	1256 aa		13.69	□□□□□ -0.22
ARID1A-204	ENST00000430799	VGF	O15240	615 aa	Predicted RBP	13.68	□□□□□ -0.22
ARID1A-204	ENST00000430799	TMX4	Q9H1E5	349 aa	Predicted RBP	13.68	□□□□□ -0.22
ARID1A-204	ENST00000430799	KIF3A	Q9Y496	699 aa		13.68	□□□□□ -0.22
ARID1A-204	ENST00000430799	DEK	P35659	375 aa	Known RBP	13.67	□□□□□ -0.22
ARID1A-204	ENST00000430799	AMPH	P49418	695 aa		13.67	□□□□□ -0.22
ARID1A-204	ENST00000430799	SPRYD3	Q8NCJ5	442 aa		13.67	□□□□□ -0.22
ARID1A-204	ENST00000430799	CHMP4C	Q96CF2	233 aa		13.67	□□□□□ -0.22
ARID1A-204	ENST00000430799	ISY1	Q9ULR0	285 aa	Known RBP	13.67	□□□□□ -0.22
ARID1A-204	ENST00000430799	STAC3	Q96MF2	364 aa		13.66	□□□□□ -0.22
ARID1A-204	ENST00000430799	TPM4	P67936	248 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms