RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 NUP153P49790 1475 aaKnown RBP10.89□□□□□ -0.67
SMC6-205ENST00000430591 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
SMC6-205ENST00000430591 LRRIQ1Q96JM4 1722 aa10.89□□□□□ -0.67
SMC6-205ENST00000430591 EPRSP07814 1512 aaKnown RBP10.89□□□□□ -0.67
SMC6-205ENST00000430591 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
SMC6-205ENST00000430591 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
SMC6-205ENST00000430591 CDK13Q14004 1512 aaKnown RBP10.87□□□□□ -0.67
SMC6-205ENST00000430591 WDR7Q9Y4E6 1490 aa10.87□□□□□ -0.67
SMC6-205ENST00000430591 KCNH8Q96L42 1107 aa10.86□□□□□ -0.67
SMC6-205ENST00000430591 MAP3K4Q9Y6R4 1608 aa10.86□□□□□ -0.67
SMC6-205ENST00000430591 GLI2P10070 1586 aa10.86□□□□□ -0.67
SMC6-205ENST00000430591 LOC105371045A0A1W2PR82 267 aa10.85□□□□□ -0.67
SMC6-205ENST00000430591 ZNF692Q9BU19 519 aaPredicted RBP10.84□□□□□ -0.67
SMC6-205ENST00000430591 PITPNM1O00562 1244 aa10.83□□□□□ -0.68
SMC6-205ENST00000430591 PCF11O94913 1555 aaKnown RBP10.82□□□□□ -0.68
SMC6-205ENST00000430591 COL17A1Q9UMD9 1497 aaPredicted RBP10.82□□□□□ -0.68
SMC6-205ENST00000430591 KDM6BO15054 1643 aa10.81□□□□□ -0.68
SMC6-205ENST00000430591 ATP1B4Q9UN42 357 aaPredicted RBP10.8□□□□□ -0.68
SMC6-205ENST00000430591 CLIP1P30622 1438 aa10.79□□□□□ -0.68
SMC6-205ENST00000430591 CFAP43Q8NDM7 1665 aa10.79□□□□□ -0.68
SMC6-205ENST00000430591 TTC37Q6PGP7 1564 aa10.77□□□□□ -0.68
SMC6-205ENST00000430591 HECW1Q76N89 1606 aa10.77□□□□□ -0.68
SMC6-205ENST00000430591 ABCA9Q8IUA7 1624 aa10.77□□□□□ -0.68
SMC6-205ENST00000430591 MAGI3Q5TCQ9 1506 aa10.77□□□□□ -0.69
SMC6-205ENST00000430591 KIF14Q15058 1648 aa10.76□□□□□ -0.69
SMC6-205ENST00000430591 CD109Q6YHK3 1445 aa10.76□□□□□ -0.69
SMC6-205ENST00000430591 CEP162Q5TB80 1403 aa10.75□□□□□ -0.69
SMC6-205ENST00000430591 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
SMC6-205ENST00000430591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMC6-205ENST00000430591 CASKIN1Q8WXD9 1431 aa10.72□□□□□ -0.69
SMC6-205ENST00000430591 PIP4P2Q8N4L2 257 aa10.7□□□□□ -0.7
SMC6-205ENST00000430591 FRMPD1Q5SYB0 1578 aa10.69□□□□□ -0.7
SMC6-205ENST00000430591 TEX14Q8IWB6 1497 aa10.69□□□□□ -0.7
SMC6-205ENST00000430591 PLEKHD1A6NEE1 506 aa10.69□□□□□ -0.7
SMC6-205ENST00000430591 FYCO1Q9BQS8 1478 aa10.68□□□□□ -0.7
SMC6-205ENST00000430591 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
SMC6-205ENST00000430591 RAPGEF3O95398 923 aa10.67□□□□□ -0.7
SMC6-205ENST00000430591 TROQ12816 1431 aaPredicted RBP10.67□□□□□ -0.7
SMC6-205ENST00000430591 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
SMC6-205ENST00000430591 FXR2P51116 673 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMC6-205ENST00000430591 CLEC11AQ9Y240 323 aa10.66□□□□□ -0.7
SMC6-205ENST00000430591 MYO5CQ9NQX4 1742 aa10.66□□□□□ -0.7
SMC6-205ENST00000430591 CDC42BPBQ9Y5S2 1711 aa10.65□□□□□ -0.7
SMC6-205ENST00000430591 RICTORQ6R327 1708 aa10.64□□□□□ -0.71
SMC6-205ENST00000430591 CDC42BPAQ5VT25 1732 aa10.64□□□□□ -0.71
SMC6-205ENST00000430591 SIGLEC1Q9BZZ2 1709 aa10.64□□□□□ -0.71
SMC6-205ENST00000430591 ARAP3Q8WWN8 1544 aa10.63□□□□□ -0.71
SMC6-205ENST00000430591 FANCAO15360 1455 aa10.63□□□□□ -0.71
SMC6-205ENST00000430591 CCDC18Q5T9S5 1454 aa10.63□□□□□ -0.71
SMC6-205ENST00000430591 AKNAQ7Z591 1439 aa10.63□□□□□ -0.71
SMC6-205ENST00000430591 KDM4FA0A1W2PPD8 638 aa10.62□□□□□ -0.71
SMC6-205ENST00000430591 PREX2Q70Z35 1606 aa10.62□□□□□ -0.71
SMC6-205ENST00000430591 NEO1Q92859 1461 aa10.61□□□□□ -0.71
SMC6-205ENST00000430591 PLCH2O75038 1416 aa10.61□□□□□ -0.71
SMC6-205ENST00000430591 ARHGEF12Q9NZN5 1544 aa10.6□□□□□ -0.71
SMC6-205ENST00000430591 VPS8Q8N3P4 1428 aa10.59□□□□□ -0.71
SMC6-205ENST00000430591 ARHGAP5Q13017 1502 aa10.59□□□□□ -0.71
SMC6-205ENST00000430591 ADGRL1O94910 1474 aa10.59□□□□□ -0.71
SMC6-205ENST00000430591 YEATS2Q9ULM3 1422 aa10.58□□□□□ -0.72
SMC6-205ENST00000430591 TIAM1Q13009 1591 aa10.58□□□□□ -0.72
SMC6-205ENST00000430591 CFAP74Q9C0B2 1584 aa10.58□□□□□ -0.72
SMC6-205ENST00000430591 SCAPERQ9BY12 1400 aa10.58□□□□□ -0.72
SMC6-205ENST00000430591 SAMD9LQ8IVG5 1584 aa10.57□□□□□ -0.72
SMC6-205ENST00000430591 DENND4BO75064 1496 aaPredicted RBP10.57□□□□□ -0.72
SMC6-205ENST00000430591 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
SMC6-205ENST00000430591 KANK4Q5T7N3 995 aaPredicted RBP10.56□□□□□ -0.72
SMC6-205ENST00000430591 GPATCH8Q9UKJ3 1502 aaKnown RBP10.56□□□□□ -0.72
SMC6-205ENST00000430591 ITSN2Q9NZM3 1697 aa10.56□□□□□ -0.72
SMC6-205ENST00000430591 MTUS2Q5JR59 1369 aa10.55□□□□□ -0.72
SMC6-205ENST00000430591 ABCC1P33527 1531 aa10.55□□□□□ -0.72
SMC6-205ENST00000430591 EHBP1L1Q8N3D4 1523 aa10.55□□□□□ -0.72
SMC6-205ENST00000430591 ARHGEF40Q8TER5 1519 aa10.55□□□□□ -0.72
SMC6-205ENST00000430591 POGZQ7Z3K3 1410 aa10.55□□□□□ -0.72
SMC6-205ENST00000430591 TRAPPC8Q9Y2L5 1435 aa10.55□□□□□ -0.72
SMC6-205ENST00000430591 ZNF644Q9H582 1327 aaPredicted RBP10.55□□□□□ -0.72
SMC6-205ENST00000430591 AFAP1Q8N556 730 aa10.54□□□□□ -0.72
SMC6-205ENST00000430591 ZMYM4Q5VZL5 1548 aa10.53□□□□□ -0.72
SMC6-205ENST00000430591 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
SMC6-205ENST00000430591 EFCAB2Q5VUJ9 269 aa10.53□□□□□ -0.72
SMC6-205ENST00000430591 ZNF777Q9ULD5 760 aaPredicted RBP10.53□□□□□ -0.72
SMC6-205ENST00000430591 ZFYVE16Q7Z3T8 1539 aa10.53□□□□□ -0.72
SMC6-205ENST00000430591 ABCA6Q8N139 1617 aa10.52□□□□□ -0.73
SMC6-205ENST00000430591 NCOA2Q15596 1464 aa10.52□□□□□ -0.73
SMC6-205ENST00000430591 PHLDB1Q86UU1 1377 aa10.52□□□□□ -0.73
SMC6-205ENST00000430591 LRRC9Q6ZRR7 1453 aa10.51□□□□□ -0.73
SMC6-205ENST00000430591 SUPT6HQ7KZ85 1726 aaKnown RBP10.51□□□□□ -0.73
SMC6-205ENST00000430591 PRKAR2AP13861 404 aaKnown RBP10.51□□□□□ -0.73
SMC6-205ENST00000430591 HNRNPMP52272 730 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMC6-205ENST00000430591 KDM5CP41229 1560 aa10.51□□□□□ -0.73
SMC6-205ENST00000430591 CCNB3Q8WWL7 1395 aa10.51□□□□□ -0.73
SMC6-205ENST00000430591 BCORL1Q5H9F3 1711 aa10.5□□□□□ -0.73
SMC6-205ENST00000430591 KIDINS220Q9ULH0 1771 aa10.5□□□□□ -0.73
SMC6-205ENST00000430591 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
SMC6-205ENST00000430591 PROM2Q8N271 834 aa10.5□□□□□ -0.73
SMC6-205ENST00000430591 DIP2CQ9Y2E4 1556 aa10.5□□□□□ -0.73
SMC6-205ENST00000430591 MADDQ8WXG6 1647 aa10.49□□□□□ -0.73
SMC6-205ENST00000430591 ADAMTSL3P82987 1691 aa10.49□□□□□ -0.73
SMC6-205ENST00000430591 HECW2Q9P2P5 1572 aa10.48□□□□□ -0.73
SMC6-205ENST00000430591 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
SMC6-205ENST00000430591 CFDP1Q9UEE9 299 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms