RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 PHLDB1Q86UU1 1377 aa39.36■■■■□ 3.89
CPNE1-212ENST00000430570 EFCAB2Q5VUJ9 269 aa39.36■■■■□ 3.89
CPNE1-212ENST00000430570 AKNAQ7Z591 1439 aa39.36■■■■□ 3.89
CPNE1-212ENST00000430570 PREX2Q70Z35 1606 aa39.34■■■■□ 3.89
CPNE1-212ENST00000430570 ARHGAP5Q13017 1502 aa39.34■■■■□ 3.89
CPNE1-212ENST00000430570 CCNB3Q8WWL7 1395 aa39.34■■■■□ 3.89
CPNE1-212ENST00000430570 CFAP74Q9C0B2 1584 aa39.31■■■■□ 3.88
CPNE1-212ENST00000430570 CFDP1Q9UEE9 299 aaPredicted RBP39.23■■■■□ 3.87
CPNE1-212ENST00000430570 RAPGEF3O95398 923 aa39.22■■■■□ 3.87
CPNE1-212ENST00000430570 ADGRL1O94910 1474 aa39.22■■■■□ 3.87
CPNE1-212ENST00000430570 ZNF777Q9ULD5 760 aaPredicted RBP39.21■■■■□ 3.87
CPNE1-212ENST00000430570 SCAPERQ9BY12 1400 aa39.19■■■■□ 3.86
CPNE1-212ENST00000430570 DENND4BO75064 1496 aaPredicted RBP39.17■■■■□ 3.86
CPNE1-212ENST00000430570 ITSN2Q9NZM3 1697 aa39.16■■■■□ 3.86
CPNE1-212ENST00000430570 SAMD9LQ8IVG5 1584 aa39.14■■■■□ 3.86
CPNE1-212ENST00000430570 PPARGC1BQ86YN6 1023 aaKnown RBP39.14■■■■□ 3.86
CPNE1-212ENST00000430570 FRMPD1Q5SYB0 1578 aa39.13■■■■□ 3.85
CPNE1-212ENST00000430570 ZNF644Q9H582 1327 aaPredicted RBP39.11■■■■□ 3.85
CPNE1-212ENST00000430570 ARHGEF12Q9NZN5 1544 aa39.11■■■■□ 3.85
CPNE1-212ENST00000430570 ABCC1P33527 1531 aa39.09■■■■□ 3.85
CPNE1-212ENST00000430570 RICTORQ6R327 1708 aa39.09■■■■□ 3.85
CPNE1-212ENST00000430570 MYOM3Q5VTT5 1437 aa39.05■■■■□ 3.84
CPNE1-212ENST00000430570 POGZQ7Z3K3 1410 aa39.05■■■■□ 3.84
CPNE1-212ENST00000430570 HNRNPMP52272 730 aaKnown RBP eCLIP39.03■■■■□ 3.841e-7■■■■□ 25.4
CPNE1-212ENST00000430570 AFAP1Q8N556 730 aa39.02■■■■□ 3.84
CPNE1-212ENST00000430570 TRAPPC8Q9Y2L5 1435 aa39.02■■■■□ 3.84
CPNE1-212ENST00000430570 SYCP2Q9BX26 1530 aa38.99■■■■□ 3.83
CPNE1-212ENST00000430570 KIAA1107Q9UPP5 1409 aa38.98■■■■□ 3.83
CPNE1-212ENST00000430570 PLEKHH2Q8IVE3 1493 aa38.98■■■■□ 3.83
CPNE1-212ENST00000430570 MIA2Q96PC5 1412 aa38.96■■■■□ 3.83
CPNE1-212ENST00000430570 CAMSAP2Q08AD1 1489 aa38.95■■■■□ 3.83
CPNE1-212ENST00000430570 ZNF518AQ6AHZ1 1483 aa38.94■■■■□ 3.82
CPNE1-212ENST00000430570 ZMYM4Q5VZL5 1548 aa38.93■■■■□ 3.82
CPNE1-212ENST00000430570 MBD5Q9P267 1494 aa38.91■■■■□ 3.82
CPNE1-212ENST00000430570 KDM5CP41229 1560 aa38.89■■■■□ 3.82
CPNE1-212ENST00000430570 FGD6Q6ZV73 1430 aa38.87■■■■□ 3.81
CPNE1-212ENST00000430570 YEATS2Q9ULM3 1422 aa38.86■■■■□ 3.81
CPNE1-212ENST00000430570 PTPN23Q9H3S7 1636 aa38.83■■■■□ 3.81
CPNE1-212ENST00000430570 MAGI2Q86UL8 1455 aa38.83■■■■□ 3.81
CPNE1-212ENST00000430570 ZFYVE16Q7Z3T8 1539 aa38.8■■■■□ 3.8
CPNE1-212ENST00000430570 MYT1LQ9UL68 1186 aa38.8■■■■□ 3.8
CPNE1-212ENST00000430570 MLH3Q9UHC1 1453 aa38.79■■■■□ 3.8
CPNE1-212ENST00000430570 HECW2Q9P2P5 1572 aa38.78■■■■□ 3.8
CPNE1-212ENST00000430570 TCOF1Q13428 1488 aaKnown RBP38.77■■■■□ 3.8
CPNE1-212ENST00000430570 ARHGEF40Q8TER5 1519 aa38.77■■■■□ 3.8
CPNE1-212ENST00000430570 SPAG9O60271 1321 aaKnown RBP38.76■■■■□ 3.8
CPNE1-212ENST00000430570 RSPH4AQ5TD94 716 aa38.75■■■■□ 3.79
CPNE1-212ENST00000430570 ARHGEF5Q12774 1597 aa38.75■■■■□ 3.79
CPNE1-212ENST00000430570 CCDC141Q6ZP82 1450 aa38.74■■■■□ 3.79
CPNE1-212ENST00000430570 KIDINS220Q9ULH0 1771 aa38.73■■■■□ 3.79
CPNE1-212ENST00000430570 FAM50AQ14320 339 aaKnown RBP38.68■■■■□ 3.78
CPNE1-212ENST00000430570 ABCA6Q8N139 1617 aa38.66■■■■□ 3.78
CPNE1-212ENST00000430570 ATP10AO60312 1499 aa38.66■■■■□ 3.78
CPNE1-212ENST00000430570 DIP2CQ9Y2E4 1556 aa38.66■■■■□ 3.78
CPNE1-212ENST00000430570 ATP7AQ04656 1500 aa38.66■■■■□ 3.78
CPNE1-212ENST00000430570 INO80Q9ULG1 1556 aaPredicted RBP38.65■■■■□ 3.78
CPNE1-212ENST00000430570 TSPY4P0CV99 314 aa38.63■■■■□ 3.77
CPNE1-212ENST00000430570 TSPY10P0CW01 314 aa38.63■■■■□ 3.77
CPNE1-212ENST00000430570 ABCC5O15440 1437 aa38.62■■■■□ 3.77
CPNE1-212ENST00000430570 RTEL1-TNFRSF6BF6WH68 1400 aa38.61■■■■□ 3.77
CPNE1-212ENST00000430570 SIGLEC1Q9BZZ2 1709 aa38.61■■■■□ 3.77
CPNE1-212ENST00000430570 C9orf84Q5VXU9 1444 aa38.6■■■■□ 3.77
CPNE1-212ENST00000430570 DAPK1P53355 1430 aa38.58■■■■□ 3.77
CPNE1-212ENST00000430570 DNMT1P26358 1616 aaKnown RBP38.57■■■■□ 3.77
CPNE1-212ENST00000430570 ARID4BQ4LE39 1312 aaPredicted RBP38.56■■■■□ 3.76
CPNE1-212ENST00000430570 MAST1Q9Y2H9 1570 aa38.53■■■■□ 3.76
CPNE1-212ENST00000430570 RRBP1Q9P2E9 1410 aaKnown RBP38.52■■■■□ 3.76
CPNE1-212ENST00000430570 CROCC2H7BZ55 1655 aa38.51■■■■□ 3.75
CPNE1-212ENST00000430570 REREQ9P2R6 1566 aa38.5■■■■□ 3.75
CPNE1-212ENST00000430570 KDM4FA0A1W2PPD8 638 aa38.49■■■■□ 3.75
CPNE1-212ENST00000430570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.47■■■■□ 3.757e-10■■□□□ 13.2
CPNE1-212ENST00000430570 SHANK2Q9UPX8 1470 aa38.46■■■■□ 3.75
CPNE1-212ENST00000430570 CHIC2Q9UKJ5 165 aa38.46■■■■□ 3.75
CPNE1-212ENST00000430570 A2MP01023 1474 aa38.45■■■■□ 3.75
CPNE1-212ENST00000430570 ADGBQ8N7X0 1667 aa38.43■■■■□ 3.74
CPNE1-212ENST00000430570 PTPRKQ15262 1439 aa38.43■■■■□ 3.74
CPNE1-212ENST00000430570 MLECQ14165 292 aa38.41■■■■□ 3.74
CPNE1-212ENST00000430570 BCORL1Q5H9F3 1711 aa38.39■■■■□ 3.74
CPNE1-212ENST00000430570 AGLP35573 1532 aa38.39■■■■□ 3.74
CPNE1-212ENST00000430570 PLXNC1O60486 1568 aa38.39■■■■□ 3.74
CPNE1-212ENST00000430570 DHX29Q7Z478 1369 aaKnown RBP38.39■■■■□ 3.74
CPNE1-212ENST00000430570 ITGAEP38570 1179 aa38.38■■■■□ 3.74
CPNE1-212ENST00000430570 RRP7BPQ9NSQ0 103 aa38.35■■■■□ 3.73
CPNE1-212ENST00000430570 ADAMTSL3P82987 1691 aa38.32■■■■□ 3.73
CPNE1-212ENST00000430570 ANKRD30AQ9BXX3 1397 aa38.31■■■■□ 3.72
CPNE1-212ENST00000430570 NCOA1Q15788 1441 aa38.3■■■■□ 3.72
CPNE1-212ENST00000430570 KIF15Q9NS87 1388 aa38.3■■■■□ 3.72
CPNE1-212ENST00000430570 ADGRL2O95490 1459 aa38.3■■■■□ 3.72
CPNE1-212ENST00000430570 KIF3BO15066 747 aa38.24■■■■□ 3.71
CPNE1-212ENST00000430570 DUOX2Q9NRD8 1548 aa38.24■■■■□ 3.71
CPNE1-212ENST00000430570 MADDQ8WXG6 1647 aa38.23■■■■□ 3.71
CPNE1-212ENST00000430570 GGT6Q6P531 493 aa38.2■■■■□ 3.71
CPNE1-212ENST00000430570 ROCK1Q13464 1354 aa38.17■■■■□ 3.7
CPNE1-212ENST00000430570 FER1L4A9Z1Z3 1794 aa38.13■■■■□ 3.7
CPNE1-212ENST00000430570 RIMS1Q86UR5 1692 aaKnown RBP38.13■■■■□ 3.69
CPNE1-212ENST00000430570 ERBINQ96RT1 1412 aa38.12■■■■□ 3.69
CPNE1-212ENST00000430570 EIF2AK4Q9P2K8 1649 aaKnown RBP38.11■■■■□ 3.69
CPNE1-212ENST00000430570 PTPRMP28827 1452 aa38.09■■■■□ 3.69
CPNE1-212ENST00000430570 ANKRD50Q9ULJ7 1429 aa38.06■■■■□ 3.68
CPNE1-212ENST00000430570 AEBP2Q6ZN18 517 aaPredicted RBP38.05■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms