RNA–Protein interactions for RNA: ENST00000430553.6

LDHA-206, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-206ENST00000430553 ARAP1Q96P48 1450 aa11.45□□□□□ -0.58
LDHA-206ENST00000430553 BBXQ8WY36 941 aaPredicted RBP11.45□□□□□ -0.58
LDHA-206ENST00000430553 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
LDHA-206ENST00000430553 ABCA8O94911 1581 aa11.43□□□□□ -0.58
LDHA-206ENST00000430553 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
LDHA-206ENST00000430553 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
LDHA-206ENST00000430553 UHRF1BP1LA0JNW5 1464 aa11.41□□□□□ -0.58
LDHA-206ENST00000430553 FHOD3Q2V2M9 1422 aa11.41□□□□□ -0.58
LDHA-206ENST00000430553 RAPGEF6Q8TEU7 1601 aa11.4□□□□□ -0.58
LDHA-206ENST00000430553 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
LDHA-206ENST00000430553 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
LDHA-206ENST00000430553 PTPRGP23470 1445 aa11.39□□□□□ -0.59
LDHA-206ENST00000430553 FYCO1Q9BQS8 1478 aa11.39□□□□□ -0.59
LDHA-206ENST00000430553 ABCC2Q92887 1545 aa11.38□□□□□ -0.59
LDHA-206ENST00000430553 NUBP1P53384 320 aa11.38□□□□□ -0.59
LDHA-206ENST00000430553 PAXIP1Q6ZW49 1069 aaPredicted RBP11.38□□□□□ -0.59
LDHA-206ENST00000430553 VPS8Q8N3P4 1428 aa11.38□□□□□ -0.59
LDHA-206ENST00000430553 PRR29P0C7W0 189 aa11.37□□□□□ -0.59
LDHA-206ENST00000430553 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
LDHA-206ENST00000430553 CASKIN1Q8WXD9 1431 aa11.37□□□□□ -0.59
LDHA-206ENST00000430553 PCF11O94913 1555 aaKnown RBP11.37□□□□□ -0.59
LDHA-206ENST00000430553 HECW1Q76N89 1606 aa11.37□□□□□ -0.59
LDHA-206ENST00000430553 ADCY10Q96PN6 1610 aa11.37□□□□□ -0.59
LDHA-206ENST00000430553 LRRIQ1Q96JM4 1722 aa11.37□□□□□ -0.59
LDHA-206ENST00000430553 UACAQ9BZF9 1416 aa11.36□□□□□ -0.59
LDHA-206ENST00000430553 CFAP44Q96MT7 982 aa11.36□□□□□ -0.59
LDHA-206ENST00000430553 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
LDHA-206ENST00000430553 PLB1Q6P1J6 1458 aa11.35□□□□□ -0.59
LDHA-206ENST00000430553 GSE1Q14687 1217 aa11.35□□□□□ -0.59
LDHA-206ENST00000430553 MAP3K1Q13233 1512 aa11.34□□□□□ -0.59
LDHA-206ENST00000430553 KDM5BQ9UGL1 1544 aa11.34□□□□□ -0.59
LDHA-206ENST00000430553 CFAP43Q8NDM7 1665 aa11.34□□□□□ -0.59
LDHA-206ENST00000430553 NUP153P49790 1475 aaKnown RBP11.34□□□□□ -0.59
LDHA-206ENST00000430553 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
LDHA-206ENST00000430553 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
LDHA-206ENST00000430553 CCDC18Q5T9S5 1454 aa11.32□□□□□ -0.6
LDHA-206ENST00000430553 DCAF8Q5TAQ9 597 aa11.32□□□□□ -0.6
LDHA-206ENST00000430553 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
LDHA-206ENST00000430553 ZCCHC11Q5TAX3 1644 aaKnown RBP11.3□□□□□ -0.6
LDHA-206ENST00000430553 EPRSP07814 1512 aaKnown RBP11.3□□□□□ -0.6
LDHA-206ENST00000430553 MAPKBP1O60336 1514 aa11.29□□□□□ -0.6
LDHA-206ENST00000430553 P3H3Q8IVL6 736 aa11.29□□□□□ -0.6
LDHA-206ENST00000430553 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
LDHA-206ENST00000430553 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
LDHA-206ENST00000430553 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
LDHA-206ENST00000430553 RANGAP1P46060 587 aaPredicted RBP11.27□□□□□ -0.61
LDHA-206ENST00000430553 KDM2AQ9Y2K7 1162 aa11.27□□□□□ -0.61
LDHA-206ENST00000430553 ATP10BO94823 1461 aa11.26□□□□□ -0.61
LDHA-206ENST00000430553 FAM212AQ96EL1 285 aa11.26□□□□□ -0.61
LDHA-206ENST00000430553 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
LDHA-206ENST00000430553 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
LDHA-206ENST00000430553 CDK13Q14004 1512 aaKnown RBP11.24□□□□□ -0.61
LDHA-206ENST00000430553 EHBP1L1Q8N3D4 1523 aa11.22□□□□□ -0.61
LDHA-206ENST00000430553 CYB5RLQ6IPT4 315 aa11.22□□□□□ -0.61
LDHA-206ENST00000430553 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
LDHA-206ENST00000430553 TSHZ2Q9NRE2 1034 aa11.21□□□□□ -0.61
LDHA-206ENST00000430553 WDR7Q9Y4E6 1490 aa11.2□□□□□ -0.62
LDHA-206ENST00000430553 MAGI3Q5TCQ9 1506 aa11.2□□□□□ -0.62
LDHA-206ENST00000430553 LRRC9Q6ZRR7 1453 aa11.2□□□□□ -0.62
LDHA-206ENST00000430553 GLI2P10070 1586 aa11.19□□□□□ -0.62
LDHA-206ENST00000430553 TROQ12816 1431 aaPredicted RBP11.19□□□□□ -0.62
LDHA-206ENST00000430553 ASXL2Q76L83 1435 aa11.18□□□□□ -0.62
LDHA-206ENST00000430553 ABCA9Q8IUA7 1624 aa11.18□□□□□ -0.62
LDHA-206ENST00000430553 BCANQ96GW7 911 aa11.18□□□□□ -0.62
LDHA-206ENST00000430553 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
LDHA-206ENST00000430553 KIF13AQ9H1H9 1805 aa11.18□□□□□ -0.62
LDHA-206ENST00000430553 KIF14Q15058 1648 aa11.17□□□□□ -0.62
LDHA-206ENST00000430553 DIP2BQ9P265 1576 aa11.17□□□□□ -0.62
LDHA-206ENST00000430553 CDK11AQ9UQ88 783 aaPredicted RBP11.16□□□□□ -0.62
LDHA-206ENST00000430553 ARAP3Q8WWN8 1544 aa11.16□□□□□ -0.62
LDHA-206ENST00000430553 TTBK1Q5TCY1 1321 aaPredicted RBP11.15□□□□□ -0.62
LDHA-206ENST00000430553 ABCC10Q5T3U5 1492 aa11.15□□□□□ -0.63
LDHA-206ENST00000430553 CHRM1P11229 460 aaPredicted RBP11.14□□□□□ -0.63
LDHA-206ENST00000430553 CDC42BPAQ5VT25 1732 aa11.14□□□□□ -0.63
LDHA-206ENST00000430553 MYO5CQ9NQX4 1742 aa11.14□□□□□ -0.63
LDHA-206ENST00000430553 MAP3K4Q9Y6R4 1608 aa11.14□□□□□ -0.63
LDHA-206ENST00000430553 ITSN2Q9NZM3 1697 aa11.13□□□□□ -0.63
LDHA-206ENST00000430553 PYGBP11216 843 aa11.13□□□□□ -0.63
LDHA-206ENST00000430553 NKX1-1Q15270 411 aaPredicted RBP11.13□□□□□ -0.63
LDHA-206ENST00000430553 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
LDHA-206ENST00000430553 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
LDHA-206ENST00000430553 MTUS2Q5JR59 1369 aa11.13□□□□□ -0.63
LDHA-206ENST00000430553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.13□□□□□ -0.631e-17■■□□□ 13.5
LDHA-206ENST00000430553 VGFO15240 615 aaPredicted RBP11.12□□□□□ -0.63
LDHA-206ENST00000430553 TTC37Q6PGP7 1564 aa11.12□□□□□ -0.63
LDHA-206ENST00000430553 PREX2Q70Z35 1606 aa11.12□□□□□ -0.63
LDHA-206ENST00000430553 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
LDHA-206ENST00000430553 STK25O00506 426 aa11.11□□□□□ -0.63
LDHA-206ENST00000430553 NCOA2Q15596 1464 aa11.1□□□□□ -0.63
LDHA-206ENST00000430553 CDC42BPBQ9Y5S2 1711 aa11.1□□□□□ -0.63
LDHA-206ENST00000430553 PPRC1Q5VV67 1664 aaKnown RBP11.09□□□□□ -0.63
LDHA-206ENST00000430553 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
LDHA-206ENST00000430553 CFAP74Q9C0B2 1584 aa11.08□□□□□ -0.64
LDHA-206ENST00000430553 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
LDHA-206ENST00000430553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
LDHA-206ENST00000430553 ZFP91Q96JP5 570 aaPredicted RBP11.07□□□□□ -0.64
LDHA-206ENST00000430553 GPATCH8Q9UKJ3 1502 aaKnown RBP11.06□□□□□ -0.64
LDHA-206ENST00000430553 MYOM3Q5VTT5 1437 aa11.05□□□□□ -0.64
LDHA-206ENST00000430553 MIA2Q96PC5 1412 aa11.05□□□□□ -0.64
LDHA-206ENST00000430553 ARID3CA6NKF2 412 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms