RNA–Protein interactions for RNA: ENST00000430408.1

CNOT10-204, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-204ENST00000430408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12□□□□□ -0.49
CNOT10-204ENST00000430408 PCF11O94913 1555 aaKnown RBP12□□□□□ -0.49
CNOT10-204ENST00000430408 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
CNOT10-204ENST00000430408 LOC105371045A0A1W2PR82 267 aa11.97□□□□□ -0.49
CNOT10-204ENST00000430408 PLCH2O75038 1416 aa11.96□□□□□ -0.49
CNOT10-204ENST00000430408 LRRIQ1Q96JM4 1722 aa11.96□□□□□ -0.49
CNOT10-204ENST00000430408 CFAP74Q9C0B2 1584 aa11.96□□□□□ -0.5
CNOT10-204ENST00000430408 KIF14Q15058 1648 aa11.95□□□□□ -0.5
CNOT10-204ENST00000430408 TTC37Q6PGP7 1564 aa11.95□□□□□ -0.5
CNOT10-204ENST00000430408 FANCAO15360 1455 aa11.95□□□□□ -0.5
CNOT10-204ENST00000430408 AKNAQ7Z591 1439 aa11.93□□□□□ -0.5
CNOT10-204ENST00000430408 EFCAB2Q5VUJ9 269 aa11.92□□□□□ -0.5
CNOT10-204ENST00000430408 DENND4BO75064 1496 aaPredicted RBP11.9□□□□□ -0.5
CNOT10-204ENST00000430408 MYO5CQ9NQX4 1742 aa11.9□□□□□ -0.5
CNOT10-204ENST00000430408 RAPGEF3O95398 923 aa11.89□□□□□ -0.51
CNOT10-204ENST00000430408 VPS8Q8N3P4 1428 aa11.88□□□□□ -0.51
CNOT10-204ENST00000430408 MTUS2Q5JR59 1369 aa11.87□□□□□ -0.51
CNOT10-204ENST00000430408 ADGRL1O94910 1474 aa11.87□□□□□ -0.51
CNOT10-204ENST00000430408 FRMPD1Q5SYB0 1578 aa11.87□□□□□ -0.51
CNOT10-204ENST00000430408 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
CNOT10-204ENST00000430408 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
CNOT10-204ENST00000430408 MAGI2Q86UL8 1455 aa11.86□□□□□ -0.51
CNOT10-204ENST00000430408 RICTORQ6R327 1708 aa11.86□□□□□ -0.51
CNOT10-204ENST00000430408 ZMYM4Q5VZL5 1548 aa11.86□□□□□ -0.51
CNOT10-204ENST00000430408 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
CNOT10-204ENST00000430408 PREX2Q70Z35 1606 aa11.85□□□□□ -0.51
CNOT10-204ENST00000430408 EHBP1L1Q8N3D4 1523 aa11.85□□□□□ -0.51
CNOT10-204ENST00000430408 POGZQ7Z3K3 1410 aa11.85□□□□□ -0.51
CNOT10-204ENST00000430408 MAP3K1Q13233 1512 aa11.84□□□□□ -0.51
CNOT10-204ENST00000430408 GPATCH8Q9UKJ3 1502 aaKnown RBP11.83□□□□□ -0.52
CNOT10-204ENST00000430408 CDC42BPBQ9Y5S2 1711 aa11.83□□□□□ -0.52
CNOT10-204ENST00000430408 ZNF518AQ6AHZ1 1483 aa11.83□□□□□ -0.52
CNOT10-204ENST00000430408 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
CNOT10-204ENST00000430408 CDC42BPAQ5VT25 1732 aa11.81□□□□□ -0.52
CNOT10-204ENST00000430408 TIAM1Q13009 1591 aa11.81□□□□□ -0.52
CNOT10-204ENST00000430408 ARHGEF40Q8TER5 1519 aa11.81□□□□□ -0.52
CNOT10-204ENST00000430408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.528e-6■□□□□ 8.2
CNOT10-204ENST00000430408 ABCC1P33527 1531 aa11.8□□□□□ -0.52
CNOT10-204ENST00000430408 ZFYVE16Q7Z3T8 1539 aa11.8□□□□□ -0.52
CNOT10-204ENST00000430408 KDM5CP41229 1560 aa11.79□□□□□ -0.52
CNOT10-204ENST00000430408 KIAA1107Q9UPP5 1409 aa11.79□□□□□ -0.52
CNOT10-204ENST00000430408 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
CNOT10-204ENST00000430408 CFDP1Q9UEE9 299 aaPredicted RBP11.79□□□□□ -0.52
CNOT10-204ENST00000430408 LRRC9Q6ZRR7 1453 aa11.78□□□□□ -0.52
CNOT10-204ENST00000430408 MLH3Q9UHC1 1453 aa11.77□□□□□ -0.52
CNOT10-204ENST00000430408 AFAP1Q8N556 730 aa11.77□□□□□ -0.53
CNOT10-204ENST00000430408 SUPT6HQ7KZ85 1726 aaKnown RBP11.77□□□□□ -0.53
CNOT10-204ENST00000430408 YEATS2Q9ULM3 1422 aa11.77□□□□□ -0.53
CNOT10-204ENST00000430408 ATP10AO60312 1499 aa11.76□□□□□ -0.53
CNOT10-204ENST00000430408 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
CNOT10-204ENST00000430408 ARHGEF12Q9NZN5 1544 aa11.76□□□□□ -0.53
CNOT10-204ENST00000430408 ITSN2Q9NZM3 1697 aa11.76□□□□□ -0.53
CNOT10-204ENST00000430408 TRAPPC8Q9Y2L5 1435 aa11.76□□□□□ -0.53
CNOT10-204ENST00000430408 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
CNOT10-204ENST00000430408 APLP2Q06481 763 aa11.75□□□□□ -0.53
CNOT10-204ENST00000430408 ZNF777Q9ULD5 760 aaPredicted RBP11.75□□□□□ -0.53
CNOT10-204ENST00000430408 HECW2Q9P2P5 1572 aa11.75□□□□□ -0.53
CNOT10-204ENST00000430408 ARID4BQ4LE39 1312 aaPredicted RBP11.74□□□□□ -0.53
CNOT10-204ENST00000430408 C9orf84Q5VXU9 1444 aa11.74□□□□□ -0.53
CNOT10-204ENST00000430408 ADAMTSL3P82987 1691 aa11.72□□□□□ -0.53
CNOT10-204ENST00000430408 REREQ9P2R6 1566 aa11.72□□□□□ -0.53
CNOT10-204ENST00000430408 SYCP2Q9BX26 1530 aa11.72□□□□□ -0.53
CNOT10-204ENST00000430408 HNRNPMP52272 730 aaKnown RBP eCLIP11.72□□□□□ -0.53
CNOT10-204ENST00000430408 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
CNOT10-204ENST00000430408 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
CNOT10-204ENST00000430408 BCORL1Q5H9F3 1711 aa11.72□□□□□ -0.53
CNOT10-204ENST00000430408 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
CNOT10-204ENST00000430408 SPAG9O60271 1321 aaKnown RBP11.7□□□□□ -0.54
CNOT10-204ENST00000430408 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
CNOT10-204ENST00000430408 DIP2CQ9Y2E4 1556 aa11.7□□□□□ -0.54
CNOT10-204ENST00000430408 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
CNOT10-204ENST00000430408 ZNF644Q9H582 1327 aaPredicted RBP11.69□□□□□ -0.54
CNOT10-204ENST00000430408 AGLP35573 1532 aa11.69□□□□□ -0.54
CNOT10-204ENST00000430408 KIDINS220Q9ULH0 1771 aa11.69□□□□□ -0.54
CNOT10-204ENST00000430408 RTEL1-TNFRSF6BF6WH68 1400 aa11.69□□□□□ -0.54
CNOT10-204ENST00000430408 MYOM3Q5VTT5 1437 aa11.68□□□□□ -0.54
CNOT10-204ENST00000430408 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
CNOT10-204ENST00000430408 ATP7AQ04656 1500 aa11.67□□□□□ -0.54
CNOT10-204ENST00000430408 PTPRMP28827 1452 aa11.67□□□□□ -0.54
CNOT10-204ENST00000430408 CAMSAP2Q08AD1 1489 aa11.67□□□□□ -0.54
CNOT10-204ENST00000430408 INO80Q9ULG1 1556 aaPredicted RBP11.67□□□□□ -0.54
CNOT10-204ENST00000430408 SIGLEC1Q9BZZ2 1709 aa11.66□□□□□ -0.54
CNOT10-204ENST00000430408 ARHGEF5Q12774 1597 aa11.66□□□□□ -0.54
CNOT10-204ENST00000430408 CCDC141Q6ZP82 1450 aa11.65□□□□□ -0.54
CNOT10-204ENST00000430408 MADDQ8WXG6 1647 aa11.65□□□□□ -0.54
CNOT10-204ENST00000430408 TSPY4P0CV99 314 aa11.63□□□□□ -0.55
CNOT10-204ENST00000430408 TSPY10P0CW01 314 aa11.63□□□□□ -0.55
CNOT10-204ENST00000430408 A2MP01023 1474 aa11.63□□□□□ -0.55
CNOT10-204ENST00000430408 MLECQ14165 292 aa11.62□□□□□ -0.55
CNOT10-204ENST00000430408 PLXNC1O60486 1568 aa11.62□□□□□ -0.55
CNOT10-204ENST00000430408 ADGBQ8N7X0 1667 aa11.62□□□□□ -0.55
CNOT10-204ENST00000430408 RIMS1Q86UR5 1692 aaKnown RBP11.61□□□□□ -0.55
CNOT10-204ENST00000430408 FER1L4A9Z1Z3 1794 aa11.6□□□□□ -0.55
CNOT10-204ENST00000430408 DHX29Q7Z478 1369 aaKnown RBP11.6□□□□□ -0.55
CNOT10-204ENST00000430408 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
CNOT10-204ENST00000430408 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
CNOT10-204ENST00000430408 MAST1Q9Y2H9 1570 aa11.59□□□□□ -0.55
CNOT10-204ENST00000430408 TCOF1Q13428 1488 aaKnown RBP11.59□□□□□ -0.55
CNOT10-204ENST00000430408 PTPN23Q9H3S7 1636 aa11.58□□□□□ -0.56
CNOT10-204ENST00000430408 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms