RNA–Protein interactions for RNA: ENST00000429812.5

PDLIM2-210, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-210ENST00000429812 ZFYVE16Q7Z3T8 1539 aa29.15■■■□□ 2.26
PDLIM2-210ENST00000429812 PLPPR3Q6T4P5 718 aa29.15■■■□□ 2.26
PDLIM2-210ENST00000429812 SIGLEC1Q9BZZ2 1709 aa29.14■■■□□ 2.26
PDLIM2-210ENST00000429812 EFCAB2Q5VUJ9 269 aa29.14■■■□□ 2.26
PDLIM2-210ENST00000429812 POGZQ7Z3K3 1410 aa29.13■■■□□ 2.25
PDLIM2-210ENST00000429812 MLECQ14165 292 aa29.12■■■□□ 2.25
PDLIM2-210ENST00000429812 MYO5CQ9NQX4 1742 aa29.11■■■□□ 2.25
PDLIM2-210ENST00000429812 PCF11O94913 1555 aaKnown RBP29.1■■■□□ 2.25
PDLIM2-210ENST00000429812 RIMS1Q86UR5 1692 aaKnown RBP29.09■■■□□ 2.25
PDLIM2-210ENST00000429812 CLIP1P30622 1438 aa29.08■■■□□ 2.25
PDLIM2-210ENST00000429812 ARHGAP5Q13017 1502 aa29.07■■■□□ 2.24
PDLIM2-210ENST00000429812 CASKIN1Q8WXD9 1431 aa29.06■■■□□ 2.24
PDLIM2-210ENST00000429812 MAGI2Q86UL8 1455 aa29.05■■■□□ 2.24
PDLIM2-210ENST00000429812 AFAP1Q8N556 730 aa29.04■■■□□ 2.24
PDLIM2-210ENST00000429812 ATP10AO60312 1499 aa28.97■■■□□ 2.23
PDLIM2-210ENST00000429812 CCDC18Q5T9S5 1454 aa28.97■■■□□ 2.23
PDLIM2-210ENST00000429812 MYT1LQ9UL68 1186 aa28.97■■■□□ 2.23
PDLIM2-210ENST00000429812 LMTK3Q96Q04 1460 aa28.96■■■□□ 2.23
PDLIM2-210ENST00000429812 CDC42BPBQ9Y5S2 1711 aa28.95■■■□□ 2.23
PDLIM2-210ENST00000429812 ZNF518AQ6AHZ1 1483 aa28.94■■■□□ 2.22
PDLIM2-210ENST00000429812 C9orf84Q5VXU9 1444 aa28.94■■■□□ 2.22
PDLIM2-210ENST00000429812 HSPA2P54652 639 aa28.93■■■□□ 2.22
PDLIM2-210ENST00000429812 FYCO1Q9BQS8 1478 aa28.92■■■□□ 2.22
PDLIM2-210ENST00000429812 ARHGEF12Q9NZN5 1544 aa28.91■■■□□ 2.22
PDLIM2-210ENST00000429812 KDM5CP41229 1560 aa28.9■■■□□ 2.22
PDLIM2-210ENST00000429812 TRAPPC8Q9Y2L5 1435 aa28.9■■■□□ 2.22
PDLIM2-210ENST00000429812 PREX2Q70Z35 1606 aa28.89■■■□□ 2.22
PDLIM2-210ENST00000429812 FER1L4A9Z1Z3 1794 aa28.88■■■□□ 2.21
PDLIM2-210ENST00000429812 CEBPAP49715 358 aaPredicted RBP28.86■■■□□ 2.21
PDLIM2-210ENST00000429812 ZNF777Q9ULD5 760 aaPredicted RBP28.86■■■□□ 2.21
PDLIM2-210ENST00000429812 ABCC1P33527 1531 aa28.84■■■□□ 2.21
PDLIM2-210ENST00000429812 DIP2CQ9Y2E4 1556 aa28.84■■■□□ 2.21
PDLIM2-210ENST00000429812 CDC42BPAQ5VT25 1732 aa28.83■■■□□ 2.21
PDLIM2-210ENST00000429812 ABCA6Q8N139 1617 aa28.81■■■□□ 2.2
PDLIM2-210ENST00000429812 ITSN2Q9NZM3 1697 aa28.79■■■□□ 2.2
PDLIM2-210ENST00000429812 MLH3Q9UHC1 1453 aa28.78■■■□□ 2.2
PDLIM2-210ENST00000429812 GPATCH8Q9UKJ3 1502 aaKnown RBP28.77■■■□□ 2.2
PDLIM2-210ENST00000429812 HNRNPMP52272 730 aaKnown RBP eCLIP28.75■■■□□ 2.19
PDLIM2-210ENST00000429812 SAMD9LQ8IVG5 1584 aa28.74■■■□□ 2.19
PDLIM2-210ENST00000429812 KIDINS220Q9ULH0 1771 aa28.71■■■□□ 2.19
PDLIM2-210ENST00000429812 SYCP2Q9BX26 1530 aa28.71■■■□□ 2.19
PDLIM2-210ENST00000429812 MTUS2Q5JR59 1369 aa28.71■■■□□ 2.19
PDLIM2-210ENST00000429812 CFDP1Q9UEE9 299 aaPredicted RBP28.7■■■□□ 2.18
PDLIM2-210ENST00000429812 CCNB3Q8WWL7 1395 aa28.69■■■□□ 2.18
PDLIM2-210ENST00000429812 REREQ9P2R6 1566 aa28.69■■■□□ 2.18
PDLIM2-210ENST00000429812 CEP162Q5TB80 1403 aa28.69■■■□□ 2.18
PDLIM2-210ENST00000429812 FBXO41Q8TF61 875 aa28.66■■■□□ 2.18
PDLIM2-210ENST00000429812 SPAG9O60271 1321 aaKnown RBP28.65■■■□□ 2.18
PDLIM2-210ENST00000429812 ZNF644Q9H582 1327 aaPredicted RBP28.64■■■□□ 2.17
PDLIM2-210ENST00000429812 AGLP35573 1532 aa28.64■■■□□ 2.17
PDLIM2-210ENST00000429812 ESF1Q9H501 851 aaKnown RBP28.61■■■□□ 2.17
PDLIM2-210ENST00000429812 PREX1Q8TCU6 1659 aa28.61■■■□□ 2.17
PDLIM2-210ENST00000429812 LOC105371045A0A1W2PR82 267 aa28.59■■■□□ 2.17
PDLIM2-210ENST00000429812 KIAA1107Q9UPP5 1409 aa28.57■■■□□ 2.16
PDLIM2-210ENST00000429812 C3P01024 1663 aa28.57■■■□□ 2.16
PDLIM2-210ENST00000429812 TIAM1Q13009 1591 aa28.56■■■□□ 2.16
PDLIM2-210ENST00000429812 UHRF1BP1Q6BDS2 1440 aa28.56■■■□□ 2.16
PDLIM2-210ENST00000429812 ATP7AQ04656 1500 aa28.54■■■□□ 2.16
PDLIM2-210ENST00000429812 EHBP1L1Q8N3D4 1523 aa28.54■■■□□ 2.16
PDLIM2-210ENST00000429812 PLEKHH2Q8IVE3 1493 aa28.53■■■□□ 2.16
PDLIM2-210ENST00000429812 SUPT6HQ7KZ85 1726 aaKnown RBP28.53■■■□□ 2.16
PDLIM2-210ENST00000429812 INO80Q9ULG1 1556 aaPredicted RBP28.5■■■□□ 2.15
PDLIM2-210ENST00000429812 SETD1BQ9UPS6 1966 aaKnown RBP28.48■■■□□ 2.15
PDLIM2-210ENST00000429812 A2MP01023 1474 aa28.47■■■□□ 2.15
PDLIM2-210ENST00000429812 CNTLNQ9NXG0 1405 aa28.46■■■□□ 2.15
PDLIM2-210ENST00000429812 GGT6Q6P531 493 aa28.46■■■□□ 2.15
PDLIM2-210ENST00000429812 CERKQ8TCT0 537 aa28.46■■■□□ 2.15
PDLIM2-210ENST00000429812 STRCQ7RTU9 1775 aa28.46■■■□□ 2.15
PDLIM2-210ENST00000429812 MBD5Q9P267 1494 aa28.46■■■□□ 2.15
PDLIM2-210ENST00000429812 ZMYM3Q14202 1370 aa28.44■■■□□ 2.14
PDLIM2-210ENST00000429812 PLXNC1O60486 1568 aa28.43■■■□□ 2.14
PDLIM2-210ENST00000429812 NCOA2Q15596 1464 aa28.43■■■□□ 2.14
PDLIM2-210ENST00000429812 CLTCQ00610 1675 aaKnown RBP28.38■■■□□ 2.13
PDLIM2-210ENST00000429812 DMRT2Q9Y5R5 561 aa28.36■■■□□ 2.13
PDLIM2-210ENST00000429812 CAMSAP2Q08AD1 1489 aa28.35■■■□□ 2.13
PDLIM2-210ENST00000429812 MROH2AA6NES4 1674 aa28.35■■■□□ 2.13
PDLIM2-210ENST00000429812 VPS8Q8N3P4 1428 aa28.35■■■□□ 2.13
PDLIM2-210ENST00000429812 ADGBQ8N7X0 1667 aa28.33■■■□□ 2.13
PDLIM2-210ENST00000429812 NPATQ14207 1427 aa28.33■■■□□ 2.13
PDLIM2-210ENST00000429812 KANK4Q5T7N3 995 aaPredicted RBP28.31■■■□□ 2.12
PDLIM2-210ENST00000429812 RTEL1-TNFRSF6BF6WH68 1400 aa28.31■■■□□ 2.12
PDLIM2-210ENST00000429812 CCDC141Q6ZP82 1450 aa28.3■■■□□ 2.12
PDLIM2-210ENST00000429812 PTPRKQ15262 1439 aa28.29■■■□□ 2.12
PDLIM2-210ENST00000429812 DHX29Q7Z478 1369 aaKnown RBP28.29■■■□□ 2.12
PDLIM2-210ENST00000429812 LRRC9Q6ZRR7 1453 aa28.28■■■□□ 2.12
PDLIM2-210ENST00000429812 NCOA1Q15788 1441 aa28.28■■■□□ 2.12
PDLIM2-210ENST00000429812 KIF3BO15066 747 aa28.28■■■□□ 2.12
PDLIM2-210ENST00000429812 PTPRTO14522 1441 aa28.27■■■□□ 2.12
PDLIM2-210ENST00000429812 CAMSAP1Q5T5Y3 1602 aa28.26■■■□□ 2.11
PDLIM2-210ENST00000429812 NCKAP5LQ9HCH0 1330 aa28.26■■■□□ 2.11
PDLIM2-210ENST00000429812 MYO3AQ8NEV4 1616 aa28.21■■■□□ 2.11
PDLIM2-210ENST00000429812 RSPH4AQ5TD94 716 aa28.2■■■□□ 2.1
PDLIM2-210ENST00000429812 FBXO31Q5XUX0 539 aaPredicted RBP28.2■■■□□ 2.1
PDLIM2-210ENST00000429812 PPP6R1Q9UPN7 881 aa28.2■■■□□ 2.1
PDLIM2-210ENST00000429812 TSPY4P0CV99 314 aa28.18■■■□□ 2.1
PDLIM2-210ENST00000429812 TSPY10P0CW01 314 aa28.18■■■□□ 2.1
PDLIM2-210ENST00000429812 ARHGEF5Q12774 1597 aa28.16■■■□□ 2.1
PDLIM2-210ENST00000429812 CEP170BQ9Y4F5 1589 aaPredicted RBP28.16■■■□□ 2.1
PDLIM2-210ENST00000429812 LTBP4Q8N2S1 1624 aa28.14■■■□□ 2.09
PDLIM2-210ENST00000429812 ZNF142P52746 1687 aaPredicted RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms