RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 PRG4Q92954 1404 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-204ENST00000429774 AEBP2Q6ZN18 517 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-204ENST00000429774 MRS2Q9HD23 443 aa9.51□□□□□ -0.89
ATXN3-204ENST00000429774 SRPK2P78362 688 aaKnown RBP9.51□□□□□ -0.89
ATXN3-204ENST00000429774 KNSTRNQ9Y448 316 aa9.51□□□□□ -0.89
ATXN3-204ENST00000429774 CC2D1BQ5T0F9 858 aaKnown RBP9.5□□□□□ -0.89
ATXN3-204ENST00000429774 ARXQ96QS3 562 aa9.5□□□□□ -0.89
ATXN3-204ENST00000429774 MPHOSPH9Q99550 1183 aa9.49□□□□□ -0.89
ATXN3-204ENST00000429774 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-204ENST00000429774 CDCA8Q53HL2 280 aa9.48□□□□□ -0.89
ATXN3-204ENST00000429774 KIF21AQ7Z4S6 1674 aa9.48□□□□□ -0.89
ATXN3-204ENST00000429774 ARHGAP5Q13017 1502 aa9.47□□□□□ -0.89
ATXN3-204ENST00000429774 RAB3GAP2Q9H2M9 1393 aa9.47□□□□□ -0.89
ATXN3-204ENST00000429774 ANP32EQ9BTT0 268 aa9.47□□□□□ -0.89
ATXN3-204ENST00000429774 EID1Q9Y6B2 187 aa9.46□□□□□ -0.89
ATXN3-204ENST00000429774 LAS1LQ9Y4W2 734 aaKnown RBP9.46□□□□□ -0.89
ATXN3-204ENST00000429774 KIF21BO75037 1637 aa9.45□□□□□ -0.9
ATXN3-204ENST00000429774 NPM2Q86SE8 214 aaKnown RBP9.45□□□□□ -0.9
ATXN3-204ENST00000429774 CFAP53Q96M91 514 aa9.44□□□□□ -0.9
ATXN3-204ENST00000429774 ROCK2O75116 1388 aaKnown RBP9.44□□□□□ -0.9
ATXN3-204ENST00000429774 TMF1P82094 1093 aa9.44□□□□□ -0.9
ATXN3-204ENST00000429774 NEUROD2Q15784 382 aa9.44□□□□□ -0.9
ATXN3-204ENST00000429774 RSPH4AQ5TD94 716 aa9.43□□□□□ -0.9
ATXN3-204ENST00000429774 MIER1Q8N108 512 aa9.43□□□□□ -0.9
ATXN3-204ENST00000429774 ZNF644Q9H582 1327 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-204ENST00000429774 NUTM2FA1L443 756 aa9.43□□□□□ -0.9
ATXN3-204ENST00000429774 URB2Q14146 1524 aaKnown RBP9.43□□□□□ -0.9
ATXN3-204ENST00000429774 NBR1Q14596 966 aa9.42□□□□□ -0.9
ATXN3-204ENST00000429774 SYNJ2O15056 1496 aa9.42□□□□□ -0.9
ATXN3-204ENST00000429774 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
ATXN3-204ENST00000429774 CUL7Q14999 1698 aa9.41□□□□□ -0.9
ATXN3-204ENST00000429774 FKBP8Q14318 412 aa9.41□□□□□ -0.9
ATXN3-204ENST00000429774 ANP32AP39687 249 aaKnown RBP9.4□□□□□ -0.9
ATXN3-204ENST00000429774 PEG3Q9GZU2 1588 aa9.39□□□□□ -0.91
ATXN3-204ENST00000429774 IRX6P78412 446 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-204ENST00000429774 ERICH3Q5RHP9 1530 aa9.39□□□□□ -0.91
ATXN3-204ENST00000429774 HECW1Q76N89 1606 aa9.39□□□□□ -0.91
ATXN3-204ENST00000429774 HSPA5P11021 654 aaKnown RBP9.38□□□□□ -0.91
ATXN3-204ENST00000429774 ZNF608Q9ULD9 1512 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-204ENST00000429774 IQGAP2Q13576 1575 aa9.38□□□□□ -0.91
ATXN3-204ENST00000429774 CCDC9Q9Y3X0 531 aaKnown RBP9.38□□□□□ -0.91
ATXN3-204ENST00000429774 MAPK8IP3Q9UPT6 1336 aa9.37□□□□□ -0.91
ATXN3-204ENST00000429774 HDGFL2Q7Z4V5 671 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-204ENST00000429774 MORC1Q86VD1 984 aa9.36□□□□□ -0.91
ATXN3-204ENST00000429774 TRAK1Q9UPV9 953 aa9.36□□□□□ -0.91
ATXN3-204ENST00000429774 NPHP1O15259 732 aa9.36□□□□□ -0.91
ATXN3-204ENST00000429774 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-204ENST00000429774 ABCA10Q8WWZ4 1543 aa9.36□□□□□ -0.91
ATXN3-204ENST00000429774 CASKIN1Q8WXD9 1431 aa9.36□□□□□ -0.91
ATXN3-204ENST00000429774 NUDCQ9Y266 331 aa9.36□□□□□ -0.91
ATXN3-204ENST00000429774 LRRC9Q6ZRR7 1453 aa9.35□□□□□ -0.91
ATXN3-204ENST00000429774 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
ATXN3-204ENST00000429774 BIVM-ERCC5R4GMW8 1640 aa9.35□□□□□ -0.91
ATXN3-204ENST00000429774 NCOA2Q15596 1464 aa9.34□□□□□ -0.91
ATXN3-204ENST00000429774 AFAP1Q8N556 730 aa9.34□□□□□ -0.91
ATXN3-204ENST00000429774 FYCO1Q9BQS8 1478 aa9.34□□□□□ -0.91
ATXN3-204ENST00000429774 CDK13Q14004 1512 aaKnown RBP9.34□□□□□ -0.91
ATXN3-204ENST00000429774 CCDC144AA2RUR9 1427 aa9.34□□□□□ -0.91
ATXN3-204ENST00000429774 EFCAB5A4FU69 1503 aa9.34□□□□□ -0.91
ATXN3-204ENST00000429774 SUPT6HQ7KZ85 1726 aaKnown RBP9.33□□□□□ -0.92
ATXN3-204ENST00000429774 ARAP1Q96P48 1450 aa9.33□□□□□ -0.92
ATXN3-204ENST00000429774 NGDNQ8NEJ9 315 aaKnown RBP9.33□□□□□ -0.92
ATXN3-204ENST00000429774 GRIN2AQ12879 1464 aa9.33□□□□□ -0.92
ATXN3-204ENST00000429774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.33□□□□□ -0.92
ATXN3-204ENST00000429774 EIF3AQ14152 1382 aaKnown RBP9.32□□□□□ -0.92
ATXN3-204ENST00000429774 MYOM3Q5VTT5 1437 aa9.32□□□□□ -0.92
ATXN3-204ENST00000429774 MAGI1Q96QZ7 1491 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-204ENST00000429774 L3MBTL2Q969R5 705 aa9.32□□□□□ -0.92
ATXN3-204ENST00000429774 MYH16Q9H6N6 1097 aa9.31□□□□□ -0.92
ATXN3-204ENST00000429774 FGD6Q6ZV73 1430 aa9.31□□□□□ -0.92
ATXN3-204ENST00000429774 KIF15Q9NS87 1388 aa9.31□□□□□ -0.92
ATXN3-204ENST00000429774 RAPGEF3O95398 923 aa9.31□□□□□ -0.92
ATXN3-204ENST00000429774 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
ATXN3-204ENST00000429774 PBRM1Q86U86 1689 aa9.3□□□□□ -0.92
ATXN3-204ENST00000429774 EHBP1L1Q8N3D4 1523 aa9.3□□□□□ -0.92
ATXN3-204ENST00000429774 KIAA0586Q9BVV6 1533 aa9.29□□□□□ -0.92
ATXN3-204ENST00000429774 PCF11O94913 1555 aaKnown RBP9.29□□□□□ -0.92
ATXN3-204ENST00000429774 CTTNBP2Q8WZ74 1663 aa9.29□□□□□ -0.92
ATXN3-204ENST00000429774 LTV1Q96GA3 475 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-204ENST00000429774 CCDC136Q96JN2 1154 aa9.29□□□□□ -0.92
ATXN3-204ENST00000429774 UACAQ9BZF9 1416 aa9.28□□□□□ -0.92
ATXN3-204ENST00000429774 PRXQ9BXM0 1461 aa9.28□□□□□ -0.92
ATXN3-204ENST00000429774 PNNQ9H307 717 aaKnown RBP9.28□□□□□ -0.92
ATXN3-204ENST00000429774 MINK1Q8N4C8 1332 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-204ENST00000429774 PLB1Q6P1J6 1458 aa9.27□□□□□ -0.92
ATXN3-204ENST00000429774 MEX3CQ5U5Q3 659 aaKnown RBP9.27□□□□□ -0.93
ATXN3-204ENST00000429774 FTSJ3Q8IY81 847 aaKnown RBP9.27□□□□□ -0.93
ATXN3-204ENST00000429774 KIF14Q15058 1648 aa9.27□□□□□ -0.93
ATXN3-204ENST00000429774 SCAPERQ9BY12 1400 aa9.27□□□□□ -0.93
ATXN3-204ENST00000429774 VGFO15240 615 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-204ENST00000429774 RTN4Q9NQC3 1192 aaKnown RBP9.27□□□□□ -0.93
ATXN3-204ENST00000429774 RTF1Q92541 710 aaKnown RBP9.27□□□□□ -0.93
ATXN3-204ENST00000429774 ARHGEF11O15085 1522 aa9.26□□□□□ -0.93
ATXN3-204ENST00000429774 FRAT1Q92837 279 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-204ENST00000429774 KTN1Q86UP2 1357 aaKnown RBP9.25□□□□□ -0.93
ATXN3-204ENST00000429774 ZNF330Q9Y3S2 320 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-204ENST00000429774 TERF2IPQ9NYB0 399 aa9.24□□□□□ -0.93
ATXN3-204ENST00000429774 EIF4G3O43432 1585 aaKnown RBP9.24□□□□□ -0.93
ATXN3-204ENST00000429774 TIAM1Q13009 1591 aa9.24□□□□□ -0.93
ATXN3-204ENST00000429774 HSP90AA1P07900 732 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms