RNA–Protein interactions for RNA: ENST00000429437.5

RPL35A-202, Transcript of ribosomal protein L35a, humanhuman

TSL 5

Gene RPL35A, Length 442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-202ENST00000429437 NBR1Q14596 966 aa10.57□□□□□ -0.72
RPL35A-202ENST00000429437 L3MBTL3Q96JM7 780 aaPredicted RBP10.57□□□□□ -0.72
RPL35A-202ENST00000429437 SCUBE2Q9NQ36 999 aa10.56□□□□□ -0.72
RPL35A-202ENST00000429437 TMEM92Q6UXU6 159 aa10.55□□□□□ -0.72
RPL35A-202ENST00000429437 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
RPL35A-202ENST00000429437 C3orf67Q6ZVT6 689 aa10.51□□□□□ -0.73
RPL35A-202ENST00000429437 SLAIN1Q8ND83 568 aa10.51□□□□□ -0.73
RPL35A-202ENST00000429437 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.5□□□□□ -0.73
RPL35A-202ENST00000429437 G3V3G9 751 aa10.46□□□□□ -0.73
RPL35A-202ENST00000429437 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
RPL35A-202ENST00000429437 CADPS2Q86UW7 1296 aa10.42□□□□□ -0.74
RPL35A-202ENST00000429437 KIF3CO14782 793 aa10.4□□□□□ -0.74
RPL35A-202ENST00000429437 C2orf72A6NCS6 295 aa10.39□□□□□ -0.75
RPL35A-202ENST00000429437 RYDENQ9NUL5 291 aaKnown RBP10.39□□□□□ -0.75
RPL35A-202ENST00000429437 ABCC9O60706 1549 aa10.38□□□□□ -0.75
RPL35A-202ENST00000429437 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
RPL35A-202ENST00000429437 HOXB3P14651 431 aaPredicted RBP10.35□□□□□ -0.75
RPL35A-202ENST00000429437 FAM163AQ96GL9 167 aaPredicted RBP10.32□□□□□ -0.76
RPL35A-202ENST00000429437 CRISPLD2Q9H0B8 497 aa10.32□□□□□ -0.76
RPL35A-202ENST00000429437 ST18O60284 1047 aa10.3□□□□□ -0.76
RPL35A-202ENST00000429437 TMC2Q8TDI7 906 aa10.3□□□□□ -0.76
RPL35A-202ENST00000429437 GPHNQ9NQX3 736 aaPredicted RBP10.3□□□□□ -0.76
RPL35A-202ENST00000429437 DSG2Q14126 1118 aa10.29□□□□□ -0.76
RPL35A-202ENST00000429437 FOXK1P85037 733 aa10.25□□□□□ -0.77
RPL35A-202ENST00000429437 PLPP6Q8IY26 295 aa10.24□□□□□ -0.77
RPL35A-202ENST00000429437 LARP6Q9BRS8 491 aaKnown RBP10.23□□□□□ -0.77
RPL35A-202ENST00000429437 MFSD10Q14728 455 aa10.22□□□□□ -0.77
RPL35A-202ENST00000429437 KHSRPQ92945 711 aaKnown RBP eCLIP10.22□□□□□ -0.772e-6■■■□□ 16.9
RPL35A-202ENST00000429437 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
RPL35A-202ENST00000429437 SNPHO15079 494 aa10.21□□□□□ -0.77
RPL35A-202ENST00000429437 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
RPL35A-202ENST00000429437 MARVELD3Q96A59 401 aa10.21□□□□□ -0.77
RPL35A-202ENST00000429437 PDE4AP27815 886 aa10.2□□□□□ -0.78
RPL35A-202ENST00000429437 P3H3Q8IVL6 736 aa10.2□□□□□ -0.78
RPL35A-202ENST00000429437 TULP1O00294 542 aaPredicted RBP10.19□□□□□ -0.78
RPL35A-202ENST00000429437 DOK7Q18PE1 504 aa10.19□□□□□ -0.78
RPL35A-202ENST00000429437 GPR153Q6NV75 609 aa10.19□□□□□ -0.78
RPL35A-202ENST00000429437 DDX27Q96GQ7 796 aaKnown RBP10.18□□□□□ -0.78
RPL35A-202ENST00000429437 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
RPL35A-202ENST00000429437 ARSIQ5FYB1 569 aa10.17□□□□□ -0.78
RPL35A-202ENST00000429437 KCNV2Q8TDN2 545 aa10.17□□□□□ -0.78
RPL35A-202ENST00000429437 POTEB3A0JP26 581 aa10.15□□□□□ -0.78
RPL35A-202ENST00000429437 POTEMA6NI47 508 aa10.15□□□□□ -0.78
RPL35A-202ENST00000429437 HOXB1P14653 301 aaPredicted RBP10.15□□□□□ -0.78
RPL35A-202ENST00000429437 POTEBQ6S5H4 581 aa10.15□□□□□ -0.78
RPL35A-202ENST00000429437 POTEGQ6S5H5 508 aa10.15□□□□□ -0.78
RPL35A-202ENST00000429437 ZNF710Q8N1W2 664 aa10.15□□□□□ -0.78
RPL35A-202ENST00000429437 SLC34A2O95436 690 aa10.14□□□□□ -0.79
RPL35A-202ENST00000429437 EMILIN3Q9NT22 766 aa10.14□□□□□ -0.79
RPL35A-202ENST00000429437 PCDHGA4Q9Y5G9 962 aa10.14□□□□□ -0.79
RPL35A-202ENST00000429437 UPF1Q92900 1129 aaKnown RBP eCLIP10.13□□□□□ -0.79
RPL35A-202ENST00000429437 WDR70Q9NW82 654 aa10.13□□□□□ -0.79
RPL35A-202ENST00000429437 CCDC180Q9P1Z9 1646 aa10.13□□□□□ -0.79
RPL35A-202ENST00000429437 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
RPL35A-202ENST00000429437 PTCD2Q8WV60 388 aaKnown RBP10.11□□□□□ -0.79
RPL35A-202ENST00000429437 ZSWIM6Q9HCJ5 1215 aa10.11□□□□□ -0.79
RPL35A-202ENST00000429437 KDM4FA0A1W2PPD8 638 aa10.1□□□□□ -0.79
RPL35A-202ENST00000429437 NUDT7P0C024 238 aa10.1□□□□□ -0.79
RPL35A-202ENST00000429437 EMP3P54852 163 aa10.1□□□□□ -0.79
RPL35A-202ENST00000429437 TMEM132AQ24JP5 1023 aa10.1□□□□□ -0.79
RPL35A-202ENST00000429437 LMOD2Q6P5Q4 547 aa10.1□□□□□ -0.79
RPL35A-202ENST00000429437 RIMBP2O15034 1052 aa10.09□□□□□ -0.79
RPL35A-202ENST00000429437 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
RPL35A-202ENST00000429437 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
RPL35A-202ENST00000429437 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
RPL35A-202ENST00000429437 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
RPL35A-202ENST00000429437 LHX6Q9UPM6 363 aa10.03□□□□□ -0.8
RPL35A-202ENST00000429437 DPYSL4O14531 572 aa10.02□□□□□ -0.81
RPL35A-202ENST00000429437 VARS2Q5ST30 1063 aaKnown RBP10.02□□□□□ -0.81
RPL35A-202ENST00000429437 ERBB3P21860 1342 aa10.01□□□□□ -0.81
RPL35A-202ENST00000429437 ZNF316A6NFI3 1004 aaPredicted RBP10□□□□□ -0.81
RPL35A-202ENST00000429437 E2F4Q16254 413 aa10□□□□□ -0.81
RPL35A-202ENST00000429437 EVI5O60447 810 aa9.98□□□□□ -0.81
RPL35A-202ENST00000429437 ARHGEF1Q92888 912 aaKnown RBP9.98□□□□□ -0.81
RPL35A-202ENST00000429437 ERICH6Q7L0X2 663 aa9.97□□□□□ -0.81
RPL35A-202ENST00000429437 CDAN1Q8IWY9 1227 aa9.97□□□□□ -0.81
RPL35A-202ENST00000429437 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
RPL35A-202ENST00000429437 MAP3K9P80192 1104 aa9.96□□□□□ -0.82
RPL35A-202ENST00000429437 TBC1D12O60347 775 aa9.95□□□□□ -0.82
RPL35A-202ENST00000429437 POTEEQ6S8J3 1075 aa9.95□□□□□ -0.82
RPL35A-202ENST00000429437 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
RPL35A-202ENST00000429437 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
RPL35A-202ENST00000429437 ZC3H15Q8WU90 426 aaKnown RBP9.94□□□□□ -0.82
RPL35A-202ENST00000429437 ANO8Q9HCE9 1232 aaPredicted RBP9.94□□□□□ -0.82
RPL35A-202ENST00000429437 SEMA3EO15041 775 aa9.92□□□□□ -0.82
RPL35A-202ENST00000429437 TESPA1A2RU30 521 aaPredicted RBP9.91□□□□□ -0.82
RPL35A-202ENST00000429437 ARIH1Q9Y4X5 557 aaPredicted RBP9.91□□□□□ -0.82
RPL35A-202ENST00000429437 PDIA6Q15084 440 aa9.9□□□□□ -0.82
RPL35A-202ENST00000429437 C14orf37Q86TY3 774 aa9.9□□□□□ -0.82
RPL35A-202ENST00000429437 FOSBP53539 338 aa9.89□□□□□ -0.83
RPL35A-202ENST00000429437 ZNF687Q8N1G0 1237 aa9.89□□□□□ -0.83
RPL35A-202ENST00000429437 AXIN2Q9Y2T1 843 aa9.89□□□□□ -0.83
RPL35A-202ENST00000429437 ZNF454Q8N9F8 522 aa9.88□□□□□ -0.83
RPL35A-202ENST00000429437 SLC24A3Q9HC58 644 aa9.87□□□□□ -0.83
RPL35A-202ENST00000429437 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
RPL35A-202ENST00000429437 PRIM1P49642 420 aaKnown RBP9.86□□□□□ -0.83
RPL35A-202ENST00000429437 DDX12PQ92771 950 aa9.86□□□□□ -0.83
RPL35A-202ENST00000429437 NEUROD2Q15784 382 aa9.85□□□□□ -0.83
RPL35A-202ENST00000429437 JPH4Q96JJ6 628 aa9.85□□□□□ -0.83
RPL35A-202ENST00000429437 ARXQ96QS3 562 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms