RNA–Protein interactions for RNA: ENST00000429246.5

ARPC1B-206, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-206ENST00000429246 SUPT6HQ7KZ85 1726 aaKnown RBP31.73■■■□□ 2.67
ARPC1B-206ENST00000429246 PLCH2O75038 1416 aa31.73■■■□□ 2.67
ARPC1B-206ENST00000429246 FANCAO15360 1455 aa31.7■■■□□ 2.66
ARPC1B-206ENST00000429246 LRRC9Q6ZRR7 1453 aa31.68■■■□□ 2.66
ARPC1B-206ENST00000429246 ITSN2Q9NZM3 1697 aa31.67■■■□□ 2.66
ARPC1B-206ENST00000429246 ARHGAP5Q13017 1502 aa31.63■■■□□ 2.65
ARPC1B-206ENST00000429246 AKNAQ7Z591 1439 aa31.6■■■□□ 2.65
ARPC1B-206ENST00000429246 RICTORQ6R327 1708 aa31.6■■■□□ 2.65
ARPC1B-206ENST00000429246 GPATCH8Q9UKJ3 1502 aaKnown RBP31.58■■■□□ 2.65
ARPC1B-206ENST00000429246 NCOA2Q15596 1464 aa31.57■■■□□ 2.64
ARPC1B-206ENST00000429246 APLP2Q06481 763 aa31.56■■■□□ 2.64
ARPC1B-206ENST00000429246 FRMPD1Q5SYB0 1578 aa31.56■■■□□ 2.64
ARPC1B-206ENST00000429246 EFCAB2Q5VUJ9 269 aa31.54■■■□□ 2.64
ARPC1B-206ENST00000429246 CCNB3Q8WWL7 1395 aa31.53■■■□□ 2.64
ARPC1B-206ENST00000429246 ADAMTSL3P82987 1691 aa31.51■■■□□ 2.64
ARPC1B-206ENST00000429246 ABCC1P33527 1531 aa31.5■■■□□ 2.63
ARPC1B-206ENST00000429246 SAMD9LQ8IVG5 1584 aa31.49■■■□□ 2.63
ARPC1B-206ENST00000429246 DENND4BO75064 1496 aaPredicted RBP31.49■■■□□ 2.63
ARPC1B-206ENST00000429246 KANK4Q5T7N3 995 aaPredicted RBP31.48■■■□□ 2.63
ARPC1B-206ENST00000429246 ZMYM4Q5VZL5 1548 aa31.45■■■□□ 2.63
ARPC1B-206ENST00000429246 BCORL1Q5H9F3 1711 aa31.44■■■□□ 2.62
ARPC1B-206ENST00000429246 POGZQ7Z3K3 1410 aa31.43■■■□□ 2.62
ARPC1B-206ENST00000429246 SCAPERQ9BY12 1400 aa31.43■■■□□ 2.62
ARPC1B-206ENST00000429246 PLEKHH2Q8IVE3 1493 aa31.4■■■□□ 2.62
ARPC1B-206ENST00000429246 KDM5CP41229 1560 aa31.39■■■□□ 2.62
ARPC1B-206ENST00000429246 PTPRMP28827 1452 aa31.39■■■□□ 2.62
ARPC1B-206ENST00000429246 CFDP1Q9UEE9 299 aaPredicted RBP31.38■■■□□ 2.61
ARPC1B-206ENST00000429246 ZNF518AQ6AHZ1 1483 aa31.38■■■□□ 2.61
ARPC1B-206ENST00000429246 MADDQ8WXG6 1647 aa31.38■■■□□ 2.61
ARPC1B-206ENST00000429246 SYCP2Q9BX26 1530 aa31.36■■■□□ 2.61
ARPC1B-206ENST00000429246 RAPGEF3O95398 923 aa31.36■■■□□ 2.61
ARPC1B-206ENST00000429246 ARHGEF12Q9NZN5 1544 aa31.35■■■□□ 2.61
ARPC1B-206ENST00000429246 MYOM3Q5VTT5 1437 aa31.34■■■□□ 2.61
ARPC1B-206ENST00000429246 KIAA1107Q9UPP5 1409 aa31.34■■■□□ 2.61
ARPC1B-206ENST00000429246 ARHGEF40Q8TER5 1519 aa31.34■■■□□ 2.61
ARPC1B-206ENST00000429246 MAGI2Q86UL8 1455 aa31.33■■■□□ 2.61
ARPC1B-206ENST00000429246 MIA2Q96PC5 1412 aa31.3■■■□□ 2.6
ARPC1B-206ENST00000429246 RIMS1Q86UR5 1692 aaKnown RBP31.29■■■□□ 2.6
ARPC1B-206ENST00000429246 CAMSAP2Q08AD1 1489 aa31.29■■■□□ 2.6
ARPC1B-206ENST00000429246 ZNF777Q9ULD5 760 aaPredicted RBP31.28■■■□□ 2.6
ARPC1B-206ENST00000429246 ZFYVE16Q7Z3T8 1539 aa31.27■■■□□ 2.6
ARPC1B-206ENST00000429246 TRAPPC8Q9Y2L5 1435 aa31.26■■■□□ 2.6
ARPC1B-206ENST00000429246 ARHGEF5Q12774 1597 aa31.23■■■□□ 2.59
ARPC1B-206ENST00000429246 MBD5Q9P267 1494 aa31.22■■■□□ 2.59
ARPC1B-206ENST00000429246 MLH3Q9UHC1 1453 aa31.22■■■□□ 2.59
ARPC1B-206ENST00000429246 PTPN23Q9H3S7 1636 aa31.22■■■□□ 2.59
ARPC1B-206ENST00000429246 KIDINS220Q9ULH0 1771 aa31.22■■■□□ 2.59
ARPC1B-206ENST00000429246 ARID4BQ4LE39 1312 aaPredicted RBP31.21■■■□□ 2.59
ARPC1B-206ENST00000429246 INO80Q9ULG1 1556 aaPredicted RBP31.2■■■□□ 2.58
ARPC1B-206ENST00000429246 ZNF644Q9H582 1327 aaPredicted RBP31.19■■■□□ 2.58
ARPC1B-206ENST00000429246 AFAP1Q8N556 730 aa31.18■■■□□ 2.58
ARPC1B-206ENST00000429246 FGD6Q6ZV73 1430 aa31.17■■■□□ 2.58
ARPC1B-206ENST00000429246 SIGLEC1Q9BZZ2 1709 aa31.17■■■□□ 2.58
ARPC1B-206ENST00000429246 ABCA6Q8N139 1617 aa31.16■■■□□ 2.58
ARPC1B-206ENST00000429246 YEATS2Q9ULM3 1422 aa31.16■■■□□ 2.58
ARPC1B-206ENST00000429246 DIP2CQ9Y2E4 1556 aa31.16■■■□□ 2.58
ARPC1B-206ENST00000429246 LMTK3Q96Q04 1460 aa31.15■■■□□ 2.58
ARPC1B-206ENST00000429246 HNRNPMP52272 730 aaKnown RBP eCLIP31.15■■■□□ 2.58
ARPC1B-206ENST00000429246 TCOF1Q13428 1488 aaKnown RBP31.14■■■□□ 2.58
ARPC1B-206ENST00000429246 CCDC141Q6ZP82 1450 aa31.14■■■□□ 2.58
ARPC1B-206ENST00000429246 ATP7AQ04656 1500 aa31.14■■■□□ 2.57
ARPC1B-206ENST00000429246 REREQ9P2R6 1566 aa31.13■■■□□ 2.57
ARPC1B-206ENST00000429246 CROCC2H7BZ55 1655 aa31.13■■■□□ 2.57
ARPC1B-206ENST00000429246 FBXO41Q8TF61 875 aa31.11■■■□□ 2.57
ARPC1B-206ENST00000429246 FER1L4A9Z1Z3 1794 aa31.1■■■□□ 2.57
ARPC1B-206ENST00000429246 RSPH4AQ5TD94 716 aa31.1■■■□□ 2.57
ARPC1B-206ENST00000429246 ATP10AO60312 1499 aa31.08■■■□□ 2.57
ARPC1B-206ENST00000429246 ADGBQ8N7X0 1667 aa31.08■■■□□ 2.57
ARPC1B-206ENST00000429246 MAST1Q9Y2H9 1570 aa31.08■■■□□ 2.57
ARPC1B-206ENST00000429246 C9orf84Q5VXU9 1444 aa31.07■■■□□ 2.57
ARPC1B-206ENST00000429246 DNMT1P26358 1616 aaKnown RBP31.07■■■□□ 2.56
ARPC1B-206ENST00000429246 RTEL1-TNFRSF6BF6WH68 1400 aa31.06■■■□□ 2.56
ARPC1B-206ENST00000429246 SPAG9O60271 1321 aaKnown RBP31.05■■■□□ 2.56
ARPC1B-206ENST00000429246 MYT1LQ9UL68 1186 aa30.99■■■□□ 2.55
ARPC1B-206ENST00000429246 SHANK2Q9UPX8 1470 aa30.99■■■□□ 2.55
ARPC1B-206ENST00000429246 PLXNC1O60486 1568 aa30.98■■■□□ 2.55
ARPC1B-206ENST00000429246 AGLP35573 1532 aa30.97■■■□□ 2.55
ARPC1B-206ENST00000429246 PPARGC1BQ86YN6 1023 aaKnown RBP30.96■■■□□ 2.55
ARPC1B-206ENST00000429246 DAPK1P53355 1430 aa30.94■■■□□ 2.54
ARPC1B-206ENST00000429246 PLPPR3Q6T4P5 718 aa30.94■■■□□ 2.54
ARPC1B-206ENST00000429246 ABCC5O15440 1437 aa30.92■■■□□ 2.54
ARPC1B-206ENST00000429246 TSPY4P0CV99 314 aa30.91■■■□□ 2.54
ARPC1B-206ENST00000429246 TSPY10P0CW01 314 aa30.91■■■□□ 2.54
ARPC1B-206ENST00000429246 A2MP01023 1474 aa30.9■■■□□ 2.54
ARPC1B-206ENST00000429246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.9■■■□□ 2.54
ARPC1B-206ENST00000429246 HSPA2P54652 639 aa30.88■■■□□ 2.53
ARPC1B-206ENST00000429246 RRBP1Q9P2E9 1410 aaKnown RBP30.88■■■□□ 2.53
ARPC1B-206ENST00000429246 PREX1Q8TCU6 1659 aa30.87■■■□□ 2.53
ARPC1B-206ENST00000429246 MLECQ14165 292 aa30.85■■■□□ 2.53
ARPC1B-206ENST00000429246 FAM50AQ14320 339 aaKnown RBP30.82■■■□□ 2.52
ARPC1B-206ENST00000429246 EIF2AK4Q9P2K8 1649 aaKnown RBP30.81■■■□□ 2.52
ARPC1B-206ENST00000429246 ADGRL2O95490 1459 aa30.8■■■□□ 2.52
ARPC1B-206ENST00000429246 DHX29Q7Z478 1369 aaKnown RBP30.79■■■□□ 2.52
ARPC1B-206ENST00000429246 DUOX2Q9NRD8 1548 aa30.78■■■□□ 2.52
ARPC1B-206ENST00000429246 ANKRD30AQ9BXX3 1397 aa30.72■■■□□ 2.51
ARPC1B-206ENST00000429246 RNF17Q9BXT8 1623 aaKnown RBP30.72■■■□□ 2.51
ARPC1B-206ENST00000429246 KIF15Q9NS87 1388 aa30.7■■■□□ 2.51
ARPC1B-206ENST00000429246 NCOA1Q15788 1441 aa30.7■■■□□ 2.5
ARPC1B-206ENST00000429246 MROH2AA6NES4 1674 aa30.69■■■□□ 2.5
ARPC1B-206ENST00000429246 STRCQ7RTU9 1775 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms