RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 FAM50AQ14320 339 aaKnown RBP13.54□□□□□ -0.24
SMC6-204ENST00000428868 KIF13AQ9H1H9 1805 aa13.54□□□□□ -0.24
SMC6-204ENST00000428868 MIA2Q96PC5 1412 aa13.54□□□□□ -0.24
SMC6-204ENST00000428868 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
SMC6-204ENST00000428868 KCNH8Q96L42 1107 aa13.53□□□□□ -0.24
SMC6-204ENST00000428868 PTPRKQ15262 1439 aa13.53□□□□□ -0.24
SMC6-204ENST00000428868 TSPOAP1O95153 1857 aa13.51□□□□□ -0.25
SMC6-204ENST00000428868 GCC2Q8IWJ2 1684 aa13.51□□□□□ -0.25
SMC6-204ENST00000428868 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
SMC6-204ENST00000428868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.256e-7■■■□□ 19.2
SMC6-204ENST00000428868 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
SMC6-204ENST00000428868 ITGAEP38570 1179 aa13.51□□□□□ -0.25
SMC6-204ENST00000428868 MAP3K4Q9Y6R4 1608 aa13.5□□□□□ -0.25
SMC6-204ENST00000428868 DIP2BQ9P265 1576 aa13.49□□□□□ -0.25
SMC6-204ENST00000428868 PPRC1Q5VV67 1664 aaKnown RBP13.48□□□□□ -0.25
SMC6-204ENST00000428868 SYCP2Q9BX26 1530 aa13.48□□□□□ -0.25
SMC6-204ENST00000428868 DAPK1P53355 1430 aa13.47□□□□□ -0.25
SMC6-204ENST00000428868 KDM6BO15054 1643 aa13.46□□□□□ -0.25
SMC6-204ENST00000428868 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.25
SMC6-204ENST00000428868 ABCC1P33527 1531 aa13.46□□□□□ -0.25
SMC6-204ENST00000428868 ARAP3Q8WWN8 1544 aa13.46□□□□□ -0.25
SMC6-204ENST00000428868 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMC6-204ENST00000428868 CFDP1Q9UEE9 299 aaPredicted RBP13.46□□□□□ -0.25
SMC6-204ENST00000428868 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
SMC6-204ENST00000428868 ABCC5O15440 1437 aa13.45□□□□□ -0.26
SMC6-204ENST00000428868 PLCH2O75038 1416 aa13.45□□□□□ -0.26
SMC6-204ENST00000428868 ARHGEF12Q9NZN5 1544 aa13.44□□□□□ -0.26
SMC6-204ENST00000428868 GLI2P10070 1586 aa13.44□□□□□ -0.26
SMC6-204ENST00000428868 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
SMC6-204ENST00000428868 CFAP74Q9C0B2 1584 aa13.41□□□□□ -0.26
SMC6-204ENST00000428868 FANCAO15360 1455 aa13.39□□□□□ -0.27
SMC6-204ENST00000428868 MAST1Q9Y2H9 1570 aa13.39□□□□□ -0.27
SMC6-204ENST00000428868 CCDC141Q6ZP82 1450 aa13.38□□□□□ -0.27
SMC6-204ENST00000428868 SHANK2Q9UPX8 1470 aa13.38□□□□□ -0.27
SMC6-204ENST00000428868 CHIC2Q9UKJ5 165 aa13.38□□□□□ -0.27
SMC6-204ENST00000428868 NAIPQ13075 1403 aa13.38□□□□□ -0.27
SMC6-204ENST00000428868 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
SMC6-204ENST00000428868 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
SMC6-204ENST00000428868 RAB3GAP2Q9H2M9 1393 aa13.37□□□□□ -0.27
SMC6-204ENST00000428868 HNRNPMP52272 730 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMC6-204ENST00000428868 SETD5Q9C0A6 1442 aa13.37□□□□□ -0.27
SMC6-204ENST00000428868 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
SMC6-204ENST00000428868 RICTORQ6R327 1708 aa13.36□□□□□ -0.27
SMC6-204ENST00000428868 HFM1A2PYH4 1435 aa13.36□□□□□ -0.27
SMC6-204ENST00000428868 TRAPPC8Q9Y2L5 1435 aa13.36□□□□□ -0.27
SMC6-204ENST00000428868 INO80Q9ULG1 1556 aaPredicted RBP13.36□□□□□ -0.27
SMC6-204ENST00000428868 PLEKHH2Q8IVE3 1493 aa13.36□□□□□ -0.27
SMC6-204ENST00000428868 C9orf84Q5VXU9 1444 aa13.35□□□□□ -0.27
SMC6-204ENST00000428868 PLXNC1O60486 1568 aa13.35□□□□□ -0.27
SMC6-204ENST00000428868 ADGRL1O94910 1474 aa13.35□□□□□ -0.27
SMC6-204ENST00000428868 KIAA1107Q9UPP5 1409 aa13.34□□□□□ -0.27
SMC6-204ENST00000428868 RRP7BPQ9NSQ0 103 aa13.34□□□□□ -0.27
SMC6-204ENST00000428868 KIDINS220Q9ULH0 1771 aa13.34□□□□□ -0.27
SMC6-204ENST00000428868 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
SMC6-204ENST00000428868 ZFYVE16Q7Z3T8 1539 aa13.33□□□□□ -0.28
SMC6-204ENST00000428868 FRMPD1Q5SYB0 1578 aa13.32□□□□□ -0.28
SMC6-204ENST00000428868 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
SMC6-204ENST00000428868 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
SMC6-204ENST00000428868 KDM5CP41229 1560 aa13.3□□□□□ -0.28
SMC6-204ENST00000428868 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
SMC6-204ENST00000428868 SCAPERQ9BY12 1400 aa13.3□□□□□ -0.28
SMC6-204ENST00000428868 NEO1Q92859 1461 aa13.29□□□□□ -0.28
SMC6-204ENST00000428868 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
SMC6-204ENST00000428868 DHX57Q6P158 1386 aaKnown RBP13.29□□□□□ -0.28
SMC6-204ENST00000428868 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
SMC6-204ENST00000428868 ABCA6Q8N139 1617 aa13.28□□□□□ -0.28
SMC6-204ENST00000428868 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
SMC6-204ENST00000428868 ANKRD30AQ9BXX3 1397 aa13.25□□□□□ -0.29
SMC6-204ENST00000428868 AFAP1Q8N556 730 aa13.25□□□□□ -0.29
SMC6-204ENST00000428868 UNC13BO14795 1591 aa13.24□□□□□ -0.29
SMC6-204ENST00000428868 KIF15Q9NS87 1388 aa13.24□□□□□ -0.29
SMC6-204ENST00000428868 ILDR1Q86SU0 546 aaPredicted RBP13.24□□□□□ -0.29
SMC6-204ENST00000428868 CCER1Q8TC90 406 aaPredicted RBP13.24□□□□□ -0.29
SMC6-204ENST00000428868 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
SMC6-204ENST00000428868 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
SMC6-204ENST00000428868 DUOX2Q9NRD8 1548 aa13.23□□□□□ -0.29
SMC6-204ENST00000428868 TSPY4P0CV99 314 aa13.22□□□□□ -0.29
SMC6-204ENST00000428868 TSPY10P0CW01 314 aa13.22□□□□□ -0.29
SMC6-204ENST00000428868 HRCP23327 699 aa13.22□□□□□ -0.29
SMC6-204ENST00000428868 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
SMC6-204ENST00000428868 TEX14Q8IWB6 1497 aa13.22□□□□□ -0.29
SMC6-204ENST00000428868 SIGLEC1Q9BZZ2 1709 aa13.22□□□□□ -0.29
SMC6-204ENST00000428868 ANKRD50Q9ULJ7 1429 aa13.22□□□□□ -0.29
SMC6-204ENST00000428868 DEPDC5O75140 1603 aa13.21□□□□□ -0.29
SMC6-204ENST00000428868 RSPH4AQ5TD94 716 aa13.21□□□□□ -0.29
SMC6-204ENST00000428868 RTEL1-TNFRSF6BF6WH68 1400 aa13.21□□□□□ -0.3
SMC6-204ENST00000428868 SPAG9O60271 1321 aaKnown RBP13.2□□□□□ -0.3
SMC6-204ENST00000428868 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
SMC6-204ENST00000428868 PZPP20742 1482 aa13.2□□□□□ -0.3
SMC6-204ENST00000428868 EIF2AK4Q9P2K8 1649 aaKnown RBP13.2□□□□□ -0.3
SMC6-204ENST00000428868 COL17A1Q9UMD9 1497 aaPredicted RBP13.19□□□□□ -0.3
SMC6-204ENST00000428868 IQGAP3Q86VI3 1631 aa13.19□□□□□ -0.3
SMC6-204ENST00000428868 CEP152O94986 1710 aa13.19□□□□□ -0.3
SMC6-204ENST00000428868 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
SMC6-204ENST00000428868 MLH3Q9UHC1 1453 aa13.18□□□□□ -0.3
SMC6-204ENST00000428868 MROH1Q8NDA8 1641 aa13.18□□□□□ -0.3
SMC6-204ENST00000428868 RAPGEF3O95398 923 aa13.18□□□□□ -0.3
SMC6-204ENST00000428868 BCORL1Q5H9F3 1711 aa13.18□□□□□ -0.3
SMC6-204ENST00000428868 MAGI2Q86UL8 1455 aa13.16□□□□□ -0.3
SMC6-204ENST00000428868 ERBINQ96RT1 1412 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms