RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 PHLDB1Q86UU1 1377 aa19.91■□□□□ 0.78
CCHCR1-205ENST00000428174 NEO1Q92859 1461 aa19.91■□□□□ 0.78
CCHCR1-205ENST00000428174 PREX2Q70Z35 1606 aa19.9■□□□□ 0.78
CCHCR1-205ENST00000428174 CDC42BPAQ5VT25 1732 aa19.9■□□□□ 0.78
CCHCR1-205ENST00000428174 AKNAQ7Z591 1439 aa19.89■□□□□ 0.77
CCHCR1-205ENST00000428174 ZNF777Q9ULD5 760 aaPredicted RBP19.89■□□□□ 0.77
CCHCR1-205ENST00000428174 CDC42BPBQ9Y5S2 1711 aa19.88■□□□□ 0.77
CCHCR1-205ENST00000428174 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
CCHCR1-205ENST00000428174 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
CCHCR1-205ENST00000428174 ITSN2Q9NZM3 1697 aa19.86■□□□□ 0.77
CCHCR1-205ENST00000428174 ADGRL1O94910 1474 aa19.83■□□□□ 0.76
CCHCR1-205ENST00000428174 MIA2Q96PC5 1412 aa19.82■□□□□ 0.76
CCHCR1-205ENST00000428174 SCAPERQ9BY12 1400 aa19.82■□□□□ 0.76
CCHCR1-205ENST00000428174 ZNF644Q9H582 1327 aaPredicted RBP19.81■□□□□ 0.76
CCHCR1-205ENST00000428174 KDM6BO15054 1643 aa19.8■□□□□ 0.76
CCHCR1-205ENST00000428174 COL17A1Q9UMD9 1497 aaPredicted RBP19.8■□□□□ 0.76
CCHCR1-205ENST00000428174 DENND4BO75064 1496 aaPredicted RBP19.79■□□□□ 0.76
CCHCR1-205ENST00000428174 PLEKHH2Q8IVE3 1493 aa19.79■□□□□ 0.76
CCHCR1-205ENST00000428174 SAMD9LQ8IVG5 1584 aa19.78■□□□□ 0.76
CCHCR1-205ENST00000428174 FGD6Q6ZV73 1430 aa19.78■□□□□ 0.76
CCHCR1-205ENST00000428174 RAPGEF3O95398 923 aa19.78■□□□□ 0.76
CCHCR1-205ENST00000428174 KIAA1107Q9UPP5 1409 aa19.77■□□□□ 0.76
CCHCR1-205ENST00000428174 HNRNPMP52272 730 aaKnown RBP eCLIP19.77■□□□□ 0.76
CCHCR1-205ENST00000428174 ABCC1P33527 1531 aa19.76■□□□□ 0.75
CCHCR1-205ENST00000428174 CAMSAP2Q08AD1 1489 aa19.75■□□□□ 0.75
CCHCR1-205ENST00000428174 ARHGEF12Q9NZN5 1544 aa19.75■□□□□ 0.75
CCHCR1-205ENST00000428174 SYCP2Q9BX26 1530 aa19.73■□□□□ 0.75
CCHCR1-205ENST00000428174 POGZQ7Z3K3 1410 aa19.73■□□□□ 0.75
CCHCR1-205ENST00000428174 TRAPPC8Q9Y2L5 1435 aa19.73■□□□□ 0.75
CCHCR1-205ENST00000428174 AFAP1Q8N556 730 aa19.72■□□□□ 0.75
CCHCR1-205ENST00000428174 PTPN23Q9H3S7 1636 aa19.72■□□□□ 0.75
CCHCR1-205ENST00000428174 FAM50AQ14320 339 aaKnown RBP19.71■□□□□ 0.75
CCHCR1-205ENST00000428174 TCOF1Q13428 1488 aaKnown RBP19.71■□□□□ 0.75
CCHCR1-205ENST00000428174 RSPH4AQ5TD94 716 aa19.7■□□□□ 0.74
CCHCR1-205ENST00000428174 ZNF518AQ6AHZ1 1483 aa19.7■□□□□ 0.74
CCHCR1-205ENST00000428174 MBD5Q9P267 1494 aa19.7■□□□□ 0.74
CCHCR1-205ENST00000428174 FRMPD1Q5SYB0 1578 aa19.69■□□□□ 0.74
CCHCR1-205ENST00000428174 RICTORQ6R327 1708 aa19.68■□□□□ 0.74
CCHCR1-205ENST00000428174 MYT1LQ9UL68 1186 aa19.67■□□□□ 0.74
CCHCR1-205ENST00000428174 SPAG9O60271 1321 aaKnown RBP19.66■□□□□ 0.74
CCHCR1-205ENST00000428174 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
CCHCR1-205ENST00000428174 RRBP1Q9P2E9 1410 aaKnown RBP19.65■□□□□ 0.74
CCHCR1-205ENST00000428174 ARHGEF5Q12774 1597 aa19.65■□□□□ 0.74
CCHCR1-205ENST00000428174 TSPY4P0CV99 314 aa19.64■□□□□ 0.73
CCHCR1-205ENST00000428174 TSPY10P0CW01 314 aa19.64■□□□□ 0.73
CCHCR1-205ENST00000428174 ZMYM4Q5VZL5 1548 aa19.64■□□□□ 0.73
CCHCR1-205ENST00000428174 KDM5CP41229 1560 aa19.64■□□□□ 0.73
CCHCR1-205ENST00000428174 MAGI2Q86UL8 1455 aa19.63■□□□□ 0.73
CCHCR1-205ENST00000428174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCHCR1-205ENST00000428174 MLH3Q9UHC1 1453 aa19.61■□□□□ 0.73
CCHCR1-205ENST00000428174 ABCC5O15440 1437 aa19.61■□□□□ 0.73
CCHCR1-205ENST00000428174 DAPK1P53355 1430 aa19.59■□□□□ 0.73
CCHCR1-205ENST00000428174 YEATS2Q9ULM3 1422 aa19.59■□□□□ 0.73
CCHCR1-205ENST00000428174 HECW2Q9P2P5 1572 aa19.58■□□□□ 0.73
CCHCR1-205ENST00000428174 ZFYVE16Q7Z3T8 1539 aa19.58■□□□□ 0.73
CCHCR1-205ENST00000428174 RTEL1-TNFRSF6BF6WH68 1400 aa19.58■□□□□ 0.72
CCHCR1-205ENST00000428174 DNMT1P26358 1616 aaKnown RBP19.58■□□□□ 0.72
CCHCR1-205ENST00000428174 ITGAEP38570 1179 aa19.56■□□□□ 0.72
CCHCR1-205ENST00000428174 C9orf84Q5VXU9 1444 aa19.56■□□□□ 0.72
CCHCR1-205ENST00000428174 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
CCHCR1-205ENST00000428174 KIDINS220Q9ULH0 1771 aa19.55■□□□□ 0.72
CCHCR1-205ENST00000428174 SHANK2Q9UPX8 1470 aa19.54■□□□□ 0.72
CCHCR1-205ENST00000428174 CHIC2Q9UKJ5 165 aa19.54■□□□□ 0.72
CCHCR1-205ENST00000428174 ARHGEF40Q8TER5 1519 aa19.54■□□□□ 0.72
CCHCR1-205ENST00000428174 INO80Q9ULG1 1556 aaPredicted RBP19.53■□□□□ 0.72
CCHCR1-205ENST00000428174 MAST1Q9Y2H9 1570 aa19.53■□□□□ 0.72
CCHCR1-205ENST00000428174 ATP10AO60312 1499 aa19.53■□□□□ 0.72
CCHCR1-205ENST00000428174 PTPRKQ15262 1439 aa19.51■□□□□ 0.71
CCHCR1-205ENST00000428174 CROCC2H7BZ55 1655 aa19.5■□□□□ 0.71
CCHCR1-205ENST00000428174 DIP2CQ9Y2E4 1556 aa19.5■□□□□ 0.71
CCHCR1-205ENST00000428174 ABCA6Q8N139 1617 aa19.5■□□□□ 0.71
CCHCR1-205ENST00000428174 ANKRD30AQ9BXX3 1397 aa19.49■□□□□ 0.71
CCHCR1-205ENST00000428174 RRP7BPQ9NSQ0 103 aa19.48■□□□□ 0.71
CCHCR1-205ENST00000428174 ARID4BQ4LE39 1312 aaPredicted RBP19.47■□□□□ 0.71
CCHCR1-205ENST00000428174 A2MP01023 1474 aa19.47■□□□□ 0.71
CCHCR1-205ENST00000428174 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
CCHCR1-205ENST00000428174 ADGRL2O95490 1459 aa19.46■□□□□ 0.71
CCHCR1-205ENST00000428174 KIF15Q9NS87 1388 aa19.45■□□□□ 0.7
CCHCR1-205ENST00000428174 ROCK1Q13464 1354 aa19.44■□□□□ 0.7
CCHCR1-205ENST00000428174 DHX29Q7Z478 1369 aaKnown RBP19.44■□□□□ 0.7
CCHCR1-205ENST00000428174 PLXNC1O60486 1568 aa19.44■□□□□ 0.7
CCHCR1-205ENST00000428174 REREQ9P2R6 1566 aa19.44■□□□□ 0.7
CCHCR1-205ENST00000428174 ADGBQ8N7X0 1667 aa19.43■□□□□ 0.7
CCHCR1-205ENST00000428174 DUOX2Q9NRD8 1548 aa19.41■□□□□ 0.7
CCHCR1-205ENST00000428174 AGLP35573 1532 aa19.39■□□□□ 0.69
CCHCR1-205ENST00000428174 KIF3BO15066 747 aa19.38■□□□□ 0.69
CCHCR1-205ENST00000428174 MLECQ14165 292 aa19.38■□□□□ 0.69
CCHCR1-205ENST00000428174 TRIM26Q12899 539 aaPredicted RBP19.36■□□□□ 0.69
CCHCR1-205ENST00000428174 SIGLEC1Q9BZZ2 1709 aa19.36■□□□□ 0.69
CCHCR1-205ENST00000428174 ERBINQ96RT1 1412 aa19.35■□□□□ 0.69
CCHCR1-205ENST00000428174 ANKRD50Q9ULJ7 1429 aa19.34■□□□□ 0.69
CCHCR1-205ENST00000428174 GGT6Q6P531 493 aa19.34■□□□□ 0.69
CCHCR1-205ENST00000428174 NAIPQ13075 1403 aa19.32■□□□□ 0.68
CCHCR1-205ENST00000428174 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
CCHCR1-205ENST00000428174 EIF2AK4Q9P2K8 1649 aaKnown RBP19.3■□□□□ 0.68
CCHCR1-205ENST00000428174 BCORL1Q5H9F3 1711 aa19.29■□□□□ 0.68
CCHCR1-205ENST00000428174 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
CCHCR1-205ENST00000428174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.68
CCHCR1-205ENST00000428174 ESF1Q9H501 851 aaKnown RBP19.27■□□□□ 0.68
CCHCR1-205ENST00000428174 KDM4FA0A1W2PPD8 638 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms