RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 RGL2O15211 777 aa5.02□□□□□ -1.61
RGPD1-203ENST00000428128 TRHP20396 242 aaPredicted RBP5.02□□□□□ -1.61
RGPD1-203ENST00000428128 HS6ST3Q8IZP7 471 aa5.02□□□□□ -1.61
RGPD1-203ENST00000428128 ECM2O94769 699 aaPredicted RBP5.02□□□□□ -1.61
RGPD1-203ENST00000428128 HSP90B1P14625 803 aaKnown RBP5.02□□□□□ -1.61
RGPD1-203ENST00000428128 ZBTB7CA1YPR0 619 aa5.01□□□□□ -1.61
RGPD1-203ENST00000428128 ABCC10Q5T3U5 1492 aa5.01□□□□□ -1.61
RGPD1-203ENST00000428128 ATF5Q9Y2D1 282 aaPredicted RBP5.01□□□□□ -1.61
RGPD1-203ENST00000428128 LMTK3Q96Q04 1460 aa5□□□□□ -1.61
RGPD1-203ENST00000428128 KDM5AP29375 1690 aaKnown RBP5□□□□□ -1.61
RGPD1-203ENST00000428128 SPOCK2Q92563 424 aa4.99□□□□□ -1.61
RGPD1-203ENST00000428128 TTC37Q6PGP7 1564 aa4.99□□□□□ -1.61
RGPD1-203ENST00000428128 CTTNBP2Q8WZ74 1663 aa4.99□□□□□ -1.61
RGPD1-203ENST00000428128 EPRSP07814 1512 aaKnown RBP4.99□□□□□ -1.61
RGPD1-203ENST00000428128 SAMD1Q6SPF0 538 aaPredicted RBP4.99□□□□□ -1.61
RGPD1-203ENST00000428128 PCF11O94913 1555 aaKnown RBP4.98□□□□□ -1.61
RGPD1-203ENST00000428128 ABCA9Q8IUA7 1624 aa4.98□□□□□ -1.61
RGPD1-203ENST00000428128 GRIN2BQ13224 1484 aa4.98□□□□□ -1.61
RGPD1-203ENST00000428128 MAGI3Q5TCQ9 1506 aa4.97□□□□□ -1.61
RGPD1-203ENST00000428128 SPDYE4A6NLX3 237 aa4.97□□□□□ -1.61
RGPD1-203ENST00000428128 SP7Q8TDD2 431 aaPredicted RBP4.97□□□□□ -1.61
RGPD1-203ENST00000428128 PREX1Q8TCU6 1659 aa4.97□□□□□ -1.61
RGPD1-203ENST00000428128 RICTORQ6R327 1708 aa4.96□□□□□ -1.61
RGPD1-203ENST00000428128 PDIA4P13667 645 aaKnown RBP4.96□□□□□ -1.62
RGPD1-203ENST00000428128 POLA1P09884 1462 aaPredicted RBP4.96□□□□□ -1.62
RGPD1-203ENST00000428128 LMOD2Q6P5Q4 547 aa4.95□□□□□ -1.62
RGPD1-203ENST00000428128 HECW2Q9P2P5 1572 aa4.95□□□□□ -1.62
RGPD1-203ENST00000428128 RBM42Q9BTD8 480 aaKnown RBP4.95□□□□□ -1.62
RGPD1-203ENST00000428128 FRMPD1Q5SYB0 1578 aa4.94□□□□□ -1.62
RGPD1-203ENST00000428128 FBXO41Q8TF61 875 aa4.94□□□□□ -1.62
RGPD1-203ENST00000428128 UGGT2Q9NYU1 1516 aa4.94□□□□□ -1.62
RGPD1-203ENST00000428128 KIAA0556O60303 1618 aa4.94□□□□□ -1.62
RGPD1-203ENST00000428128 GTPBP6O43824 516 aaPredicted RBP4.93□□□□□ -1.62
RGPD1-203ENST00000428128 KCTD17Q8N5Z5 321 aa4.93□□□□□ -1.62
RGPD1-203ENST00000428128 ZC3H15Q8WU90 426 aaKnown RBP4.93□□□□□ -1.62
RGPD1-203ENST00000428128 PLEKHG5O94827 1062 aa4.92□□□□□ -1.62
RGPD1-203ENST00000428128 P3H3Q8IVL6 736 aa4.92□□□□□ -1.62
RGPD1-203ENST00000428128 CUX1P39880 1505 aa4.92□□□□□ -1.62
RGPD1-203ENST00000428128 CDK11BP21127 795 aaKnown RBP4.92□□□□□ -1.62
RGPD1-203ENST00000428128 CHMP4AQ9BY43 222 aa4.92□□□□□ -1.62
RGPD1-203ENST00000428128 GRIN2AQ12879 1464 aa4.92□□□□□ -1.62
RGPD1-203ENST00000428128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.91□□□□□ -1.62
RGPD1-203ENST00000428128 PHLDB1Q86UU1 1377 aa4.91□□□□□ -1.62
RGPD1-203ENST00000428128 NKX1-1Q15270 411 aaPredicted RBP4.91□□□□□ -1.62
RGPD1-203ENST00000428128 U3KPZ7 1027 aaPredicted RBP4.91□□□□□ -1.62
RGPD1-203ENST00000428128 ZMYND10O75800 440 aa4.9□□□□□ -1.63
RGPD1-203ENST00000428128 ARHGEF40Q8TER5 1519 aa4.9□□□□□ -1.63
RGPD1-203ENST00000428128 ABCA8O94911 1581 aa4.89□□□□□ -1.63
RGPD1-203ENST00000428128 OSCARQ8IYS5 282 aa4.89□□□□□ -1.63
RGPD1-203ENST00000428128 ZCCHC11Q5TAX3 1644 aaKnown RBP4.89□□□□□ -1.63
RGPD1-203ENST00000428128 SNAPC4Q5SXM2 1469 aa4.89□□□□□ -1.63
RGPD1-203ENST00000428128 SAMD9Q5K651 1589 aa4.89□□□□□ -1.63
RGPD1-203ENST00000428128 A6NJR5 290 aa4.88□□□□□ -1.63
RGPD1-203ENST00000428128 NEUROD2Q15784 382 aa4.88□□□□□ -1.63
RGPD1-203ENST00000428128 LAMC1P11047 1609 aa4.88□□□□□ -1.63
RGPD1-203ENST00000428128 MKRN4PQ13434 485 aaPredicted RBP4.88□□□□□ -1.63
RGPD1-203ENST00000428128 IGSF5Q9NSI5 407 aa4.88□□□□□ -1.63
RGPD1-203ENST00000428128 ONECUT3O60422 494 aaPredicted RBP4.87□□□□□ -1.63
RGPD1-203ENST00000428128 CAMSAP2Q08AD1 1489 aa4.86□□□□□ -1.63
RGPD1-203ENST00000428128 CHGAP10645 457 aaKnown RBP4.86□□□□□ -1.63
RGPD1-203ENST00000428128 ABCC2Q92887 1545 aa4.86□□□□□ -1.63
RGPD1-203ENST00000428128 STRCQ7RTU9 1775 aa4.86□□□□□ -1.63
RGPD1-203ENST00000428128 SYNMO15061 1565 aa4.86□□□□□ -1.63
RGPD1-203ENST00000428128 BARGINQ6ZT62 677 aa4.85□□□□□ -1.63
RGPD1-203ENST00000428128 SLC24A3Q9HC58 644 aa4.85□□□□□ -1.63
RGPD1-203ENST00000428128 ZNF219Q9P2Y4 722 aaPredicted RBP4.85□□□□□ -1.63
RGPD1-203ENST00000428128 AMOTL2Q9Y2J4 779 aa4.84□□□□□ -1.63
RGPD1-203ENST00000428128 CCDC88BA6NC98 1476 aa4.84□□□□□ -1.63
RGPD1-203ENST00000428128 GAPVD1Q14C86 1478 aa4.84□□□□□ -1.63
RGPD1-203ENST00000428128 FHAD1B1AJZ9 1412 aa4.84□□□□□ -1.63
RGPD1-203ENST00000428128 KIF14Q15058 1648 aa4.84□□□□□ -1.63
RGPD1-203ENST00000428128 SGIP1Q9BQI5 828 aa4.84□□□□□ -1.63
RGPD1-203ENST00000428128 DEPDC5O75140 1603 aa4.84□□□□□ -1.63
RGPD1-203ENST00000428128 TEX14Q8IWB6 1497 aa4.84□□□□□ -1.64
RGPD1-203ENST00000428128 BRD2P25440 801 aaKnown RBP4.84□□□□□ -1.64
RGPD1-203ENST00000428128 COL17A1Q9UMD9 1497 aaPredicted RBP4.83□□□□□ -1.64
RGPD1-203ENST00000428128 WDR7Q9Y4E6 1490 aa4.83□□□□□ -1.64
RGPD1-203ENST00000428128 KDM5CP41229 1560 aa4.83□□□□□ -1.64
RGPD1-203ENST00000428128 UBE2Q2Q8WVN8 375 aa4.83□□□□□ -1.64
RGPD1-203ENST00000428128 MTMR7Q9Y216 660 aa4.83□□□□□ -1.64
RGPD1-203ENST00000428128 AGLP35573 1532 aa4.83□□□□□ -1.64
RGPD1-203ENST00000428128 ARHGEF12Q9NZN5 1544 aa4.83□□□□□ -1.64
RGPD1-203ENST00000428128 CHRDL2Q6WN34 429 aa4.82□□□□□ -1.64
RGPD1-203ENST00000428128 POLR1AO95602 1720 aaPredicted RBP4.82□□□□□ -1.64
RGPD1-203ENST00000428128 TESPA1A2RU30 521 aaPredicted RBP4.82□□□□□ -1.64
RGPD1-203ENST00000428128 KCNV2Q8TDN2 545 aa4.82□□□□□ -1.64
RGPD1-203ENST00000428128 PLB1Q6P1J6 1458 aa4.81□□□□□ -1.64
RGPD1-203ENST00000428128 MAGI2Q86UL8 1455 aa4.81□□□□□ -1.64
RGPD1-203ENST00000428128 FLIIQ13045 1269 aa4.81□□□□□ -1.64
RGPD1-203ENST00000428128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.81□□□□□ -1.64
RGPD1-203ENST00000428128 HNRNPUL2Q1KMD3 747 aaKnown RBP4.81□□□□□ -1.64
RGPD1-203ENST00000428128 RAD21O60216 631 aa4.8□□□□□ -1.64
RGPD1-203ENST00000428128 TRAK2O60296 914 aa4.8□□□□□ -1.64
RGPD1-203ENST00000428128 ZC3H13Q5T200 1668 aaKnown RBP4.8□□□□□ -1.64
RGPD1-203ENST00000428128 IQGAP2Q13576 1575 aa4.8□□□□□ -1.64
RGPD1-203ENST00000428128 RSPH4AQ5TD94 716 aa4.8□□□□□ -1.64
RGPD1-203ENST00000428128 AQRO60306 1485 aaKnown RBP eCLIP4.79□□□□□ -1.64
RGPD1-203ENST00000428128 FGD5Q6ZNL6 1462 aa4.79□□□□□ -1.64
RGPD1-203ENST00000428128 MKRN3Q13064 507 aaKnown RBP4.79□□□□□ -1.64
RGPD1-203ENST00000428128 CCDC125Q86Z20 511 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms