RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 PREX2Q70Z35 1606 aa26.56■■□□□ 1.84
VRK2-204ENST00000428021 KDM4FA0A1W2PPD8 638 aa26.55■■□□□ 1.84
VRK2-204ENST00000428021 CDC42BPAQ5VT25 1732 aa26.55■■□□□ 1.84
VRK2-204ENST00000428021 SCAPERQ9BY12 1400 aa26.55■■□□□ 1.84
VRK2-204ENST00000428021 EHBP1L1Q8N3D4 1523 aa26.51■■□□□ 1.83
VRK2-204ENST00000428021 GPATCH8Q9UKJ3 1502 aaKnown RBP26.51■■□□□ 1.83
VRK2-204ENST00000428021 TIAM1Q13009 1591 aa26.5■■□□□ 1.83
VRK2-204ENST00000428021 POGZQ7Z3K3 1410 aa26.49■■□□□ 1.83
VRK2-204ENST00000428021 ZMYM4Q5VZL5 1548 aa26.49■■□□□ 1.83
VRK2-204ENST00000428021 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
VRK2-204ENST00000428021 CCNB3Q8WWL7 1395 aa26.44■■□□□ 1.82
VRK2-204ENST00000428021 ARHGEF12Q9NZN5 1544 aa26.44■■□□□ 1.82
VRK2-204ENST00000428021 MAP3K1Q13233 1512 aa26.43■■□□□ 1.82
VRK2-204ENST00000428021 ARHGEF40Q8TER5 1519 aa26.43■■□□□ 1.82
VRK2-204ENST00000428021 ABCC1P33527 1531 aa26.42■■□□□ 1.82
VRK2-204ENST00000428021 MAGI2Q86UL8 1455 aa26.41■■□□□ 1.82
VRK2-204ENST00000428021 YEATS2Q9ULM3 1422 aa26.4■■□□□ 1.82
VRK2-204ENST00000428021 AFAP1Q8N556 730 aa26.4■■□□□ 1.82
VRK2-204ENST00000428021 LRRC9Q6ZRR7 1453 aa26.4■■□□□ 1.82
VRK2-204ENST00000428021 SAMD9LQ8IVG5 1584 aa26.39■■□□□ 1.82
VRK2-204ENST00000428021 ZNF518AQ6AHZ1 1483 aa26.39■■□□□ 1.82
VRK2-204ENST00000428021 ZFYVE16Q7Z3T8 1539 aa26.39■■□□□ 1.81
VRK2-204ENST00000428021 NCOA2Q15596 1464 aa26.38■■□□□ 1.81
VRK2-204ENST00000428021 KANK4Q5T7N3 995 aaPredicted RBP26.38■■□□□ 1.81
VRK2-204ENST00000428021 CFDP1Q9UEE9 299 aaPredicted RBP26.38■■□□□ 1.81
VRK2-204ENST00000428021 SUPT6HQ7KZ85 1726 aaKnown RBP26.38■■□□□ 1.81
VRK2-204ENST00000428021 TRAPPC8Q9Y2L5 1435 aa26.38■■□□□ 1.81
VRK2-204ENST00000428021 ITSN2Q9NZM3 1697 aa26.38■■□□□ 1.81
VRK2-204ENST00000428021 KDM5CP41229 1560 aa26.37■■□□□ 1.81
VRK2-204ENST00000428021 ZNF777Q9ULD5 760 aaPredicted RBP26.37■■□□□ 1.81
VRK2-204ENST00000428021 KIAA1107Q9UPP5 1409 aa26.31■■□□□ 1.8
VRK2-204ENST00000428021 SYCP2Q9BX26 1530 aa26.3■■□□□ 1.8
VRK2-204ENST00000428021 HNRNPMP52272 730 aaKnown RBP eCLIP26.3■■□□□ 1.8
VRK2-204ENST00000428021 SIGLEC1Q9BZZ2 1709 aa26.3■■□□□ 1.8
VRK2-204ENST00000428021 ZNF644Q9H582 1327 aaPredicted RBP26.29■■□□□ 1.8
VRK2-204ENST00000428021 PLEKHH2Q8IVE3 1493 aa26.29■■□□□ 1.8
VRK2-204ENST00000428021 MLH3Q9UHC1 1453 aa26.29■■□□□ 1.8
VRK2-204ENST00000428021 HECW2Q9P2P5 1572 aa26.29■■□□□ 1.8
VRK2-204ENST00000428021 ATP10AO60312 1499 aa26.28■■□□□ 1.8
VRK2-204ENST00000428021 ARID4BQ4LE39 1312 aaPredicted RBP26.26■■□□□ 1.79
VRK2-204ENST00000428021 BCORL1Q5H9F3 1711 aa26.25■■□□□ 1.79
VRK2-204ENST00000428021 ADAMTSL3P82987 1691 aa26.25■■□□□ 1.79
VRK2-204ENST00000428021 APLP2Q06481 763 aa26.25■■□□□ 1.79
VRK2-204ENST00000428021 DIP2CQ9Y2E4 1556 aa26.23■■□□□ 1.79
VRK2-204ENST00000428021 KIDINS220Q9ULH0 1771 aa26.23■■□□□ 1.79
VRK2-204ENST00000428021 C9orf84Q5VXU9 1444 aa26.22■■□□□ 1.79
VRK2-204ENST00000428021 MBD5Q9P267 1494 aa26.22■■□□□ 1.79
VRK2-204ENST00000428021 ABCA6Q8N139 1617 aa26.21■■□□□ 1.79
VRK2-204ENST00000428021 MYT1LQ9UL68 1186 aa26.21■■□□□ 1.79
VRK2-204ENST00000428021 CAMSAP2Q08AD1 1489 aa26.17■■□□□ 1.78
VRK2-204ENST00000428021 SPAG9O60271 1321 aaKnown RBP26.17■■□□□ 1.78
VRK2-204ENST00000428021 REREQ9P2R6 1566 aa26.16■■□□□ 1.78
VRK2-204ENST00000428021 MADDQ8WXG6 1647 aa26.15■■□□□ 1.78
VRK2-204ENST00000428021 MYOM3Q5VTT5 1437 aa26.14■■□□□ 1.78
VRK2-204ENST00000428021 INO80Q9ULG1 1556 aaPredicted RBP26.13■■□□□ 1.77
VRK2-204ENST00000428021 ATP7AQ04656 1500 aa26.13■■□□□ 1.77
VRK2-204ENST00000428021 MLECQ14165 292 aa26.11■■□□□ 1.77
VRK2-204ENST00000428021 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
VRK2-204ENST00000428021 PTPRMP28827 1452 aa26.11■■□□□ 1.77
VRK2-204ENST00000428021 AGLP35573 1532 aa26.09■■□□□ 1.77
VRK2-204ENST00000428021 CCDC141Q6ZP82 1450 aa26.08■■□□□ 1.77
VRK2-204ENST00000428021 RSPH4AQ5TD94 716 aa26.07■■□□□ 1.76
VRK2-204ENST00000428021 ARHGEF5Q12774 1597 aa26.07■■□□□ 1.76
VRK2-204ENST00000428021 RIMS1Q86UR5 1692 aaKnown RBP26.06■■□□□ 1.76
VRK2-204ENST00000428021 RTEL1-TNFRSF6BF6WH68 1400 aa26.05■■□□□ 1.76
VRK2-204ENST00000428021 FER1L4A9Z1Z3 1794 aa26.02■■□□□ 1.76
VRK2-204ENST00000428021 PLXNC1O60486 1568 aa26.01■■□□□ 1.75
VRK2-204ENST00000428021 A2MP01023 1474 aa26.01■■□□□ 1.75
VRK2-204ENST00000428021 FGD6Q6ZV73 1430 aa25.99■■□□□ 1.75
VRK2-204ENST00000428021 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
VRK2-204ENST00000428021 PTPN23Q9H3S7 1636 aa25.99■■□□□ 1.75
VRK2-204ENST00000428021 TSPY4P0CV99 314 aa25.96■■□□□ 1.75
VRK2-204ENST00000428021 TSPY10P0CW01 314 aa25.96■■□□□ 1.75
VRK2-204ENST00000428021 TCOF1Q13428 1488 aaKnown RBP25.95■■□□□ 1.74
VRK2-204ENST00000428021 MAST1Q9Y2H9 1570 aa25.94■■□□□ 1.74
VRK2-204ENST00000428021 DHX29Q7Z478 1369 aaKnown RBP25.93■■□□□ 1.74
VRK2-204ENST00000428021 ABCC5O15440 1437 aa25.9■■□□□ 1.74
VRK2-204ENST00000428021 PLPPR3Q6T4P5 718 aa25.88■■□□□ 1.73
VRK2-204ENST00000428021 CEBPAP49715 358 aaPredicted RBP25.86■■□□□ 1.73
VRK2-204ENST00000428021 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
VRK2-204ENST00000428021 DNMT1P26358 1616 aaKnown RBP25.85■■□□□ 1.73
VRK2-204ENST00000428021 CROCC2H7BZ55 1655 aa25.85■■□□□ 1.73
VRK2-204ENST00000428021 DAPK1P53355 1430 aa25.85■■□□□ 1.73
VRK2-204ENST00000428021 SHANK2Q9UPX8 1470 aa25.84■■□□□ 1.73
VRK2-204ENST00000428021 GGT6Q6P531 493 aa25.83■■□□□ 1.73
VRK2-204ENST00000428021 CNTLNQ9NXG0 1405 aa25.82■■□□□ 1.72
VRK2-204ENST00000428021 ESF1Q9H501 851 aaKnown RBP25.82■■□□□ 1.72
VRK2-204ENST00000428021 C3P01024 1663 aa25.81■■□□□ 1.72
VRK2-204ENST00000428021 KIF3BO15066 747 aa25.81■■□□□ 1.72
VRK2-204ENST00000428021 LMTK3Q96Q04 1460 aa25.79■■□□□ 1.72
VRK2-204ENST00000428021 FAM50AQ14320 339 aaKnown RBP25.78■■□□□ 1.72
VRK2-204ENST00000428021 PPP6R1Q9UPN7 881 aa25.78■■□□□ 1.72
VRK2-204ENST00000428021 MROH2AA6NES4 1674 aa25.77■■□□□ 1.72
VRK2-204ENST00000428021 CLTCQ00610 1675 aaKnown RBP25.77■■□□□ 1.72
VRK2-204ENST00000428021 ZMYM3Q14202 1370 aa25.75■■□□□ 1.71
VRK2-204ENST00000428021 DUOX2Q9NRD8 1548 aa25.74■■□□□ 1.71
VRK2-204ENST00000428021 KIF15Q9NS87 1388 aa25.74■■□□□ 1.71
VRK2-204ENST00000428021 RRP7BPQ9NSQ0 103 aa25.73■■□□□ 1.71
VRK2-204ENST00000428021 CHIC2Q9UKJ5 165 aa25.73■■□□□ 1.71
VRK2-204ENST00000428021 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms