RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 NEO1Q92859 1461 aa23.42■■□□□ 1.34
VARS2-203ENST00000428017 PPRC1Q5VV67 1664 aaKnown RBP23.41■■□□□ 1.34
VARS2-203ENST00000428017 ZNF777Q9ULD5 760 aaPredicted RBP23.4■■□□□ 1.34
VARS2-203ENST00000428017 CFAP74Q9C0B2 1584 aa23.39■■□□□ 1.33
VARS2-203ENST00000428017 PREX2Q70Z35 1606 aa23.38■■□□□ 1.33
VARS2-203ENST00000428017 AKNAQ7Z591 1439 aa23.37■■□□□ 1.33
VARS2-203ENST00000428017 ITSN2Q9NZM3 1697 aa23.35■■□□□ 1.33
VARS2-203ENST00000428017 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
VARS2-203ENST00000428017 CDC42BPAQ5VT25 1732 aa23.34■■□□□ 1.33
VARS2-203ENST00000428017 ADGRL1O94910 1474 aa23.33■■□□□ 1.33
VARS2-203ENST00000428017 CDC42BPBQ9Y5S2 1711 aa23.31■■□□□ 1.32
VARS2-203ENST00000428017 MIA2Q96PC5 1412 aa23.3■■□□□ 1.32
VARS2-203ENST00000428017 SCAPERQ9BY12 1400 aa23.3■■□□□ 1.32
VARS2-203ENST00000428017 KDM6BO15054 1643 aa23.3■■□□□ 1.32
VARS2-203ENST00000428017 PLEKHH2Q8IVE3 1493 aa23.29■■□□□ 1.32
VARS2-203ENST00000428017 DENND4BO75064 1496 aaPredicted RBP23.28■■□□□ 1.32
VARS2-203ENST00000428017 ZNF644Q9H582 1327 aaPredicted RBP23.26■■□□□ 1.31
VARS2-203ENST00000428017 FGD6Q6ZV73 1430 aa23.25■■□□□ 1.31
VARS2-203ENST00000428017 RAPGEF3O95398 923 aa23.25■■□□□ 1.31
VARS2-203ENST00000428017 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
VARS2-203ENST00000428017 SAMD9LQ8IVG5 1584 aa23.24■■□□□ 1.31
VARS2-203ENST00000428017 KIAA1107Q9UPP5 1409 aa23.24■■□□□ 1.31
VARS2-203ENST00000428017 ABCC1P33527 1531 aa23.23■■□□□ 1.31
VARS2-203ENST00000428017 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
VARS2-203ENST00000428017 CAMSAP2Q08AD1 1489 aa23.23■■□□□ 1.31
VARS2-203ENST00000428017 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
VARS2-203ENST00000428017 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
VARS2-203ENST00000428017 FAM50AQ14320 339 aaKnown RBP23.2■■□□□ 1.3
VARS2-203ENST00000428017 ZNF518AQ6AHZ1 1483 aa23.19■■□□□ 1.3
VARS2-203ENST00000428017 MYT1LQ9UL68 1186 aa23.19■■□□□ 1.3
VARS2-203ENST00000428017 RSPH4AQ5TD94 716 aa23.18■■□□□ 1.3
VARS2-203ENST00000428017 AFAP1Q8N556 730 aa23.18■■□□□ 1.3
VARS2-203ENST00000428017 ARHGEF12Q9NZN5 1544 aa23.18■■□□□ 1.3
VARS2-203ENST00000428017 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
VARS2-203ENST00000428017 TRAPPC8Q9Y2L5 1435 aa23.16■■□□□ 1.3
VARS2-203ENST00000428017 TCOF1Q13428 1488 aaKnown RBP23.14■■□□□ 1.29
VARS2-203ENST00000428017 MBD5Q9P267 1494 aa23.13■■□□□ 1.29
VARS2-203ENST00000428017 CCDC141Q6ZP82 1450 aa23.12■■□□□ 1.29
VARS2-203ENST00000428017 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
VARS2-203ENST00000428017 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
VARS2-203ENST00000428017 SPAG9O60271 1321 aaKnown RBP23.11■■□□□ 1.29
VARS2-203ENST00000428017 FRMPD1Q5SYB0 1578 aa23.11■■□□□ 1.29
VARS2-203ENST00000428017 RICTORQ6R327 1708 aa23.1■■□□□ 1.29
VARS2-203ENST00000428017 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.29
VARS2-203ENST00000428017 ZMYM4Q5VZL5 1548 aa23.08■■□□□ 1.29
VARS2-203ENST00000428017 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.29
VARS2-203ENST00000428017 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.29
VARS2-203ENST00000428017 KDM5CP41229 1560 aa23.07■■□□□ 1.28
VARS2-203ENST00000428017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.06■■□□□ 1.28
VARS2-203ENST00000428017 MLH3Q9UHC1 1453 aa23.05■■□□□ 1.28
VARS2-203ENST00000428017 ZFYVE16Q7Z3T8 1539 aa23.04■■□□□ 1.28
VARS2-203ENST00000428017 DAPK1P53355 1430 aa23.04■■□□□ 1.28
VARS2-203ENST00000428017 HECW2Q9P2P5 1572 aa23.03■■□□□ 1.28
VARS2-203ENST00000428017 ABCC5O15440 1437 aa23.03■■□□□ 1.28
VARS2-203ENST00000428017 ITGAEP38570 1179 aa23.03■■□□□ 1.28
VARS2-203ENST00000428017 RTEL1-TNFRSF6BF6WH68 1400 aa23.01■■□□□ 1.27
VARS2-203ENST00000428017 YEATS2Q9ULM3 1422 aa23.01■■□□□ 1.27
VARS2-203ENST00000428017 C9orf84Q5VXU9 1444 aa23■■□□□ 1.27
VARS2-203ENST00000428017 DNMT1P26358 1616 aaKnown RBP23■■□□□ 1.27
VARS2-203ENST00000428017 ATP7AQ04656 1500 aa22.99■■□□□ 1.27
VARS2-203ENST00000428017 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
VARS2-203ENST00000428017 ARHGEF40Q8TER5 1519 aa22.98■■□□□ 1.27
VARS2-203ENST00000428017 CHIC2Q9UKJ5 165 aa22.97■■□□□ 1.27
VARS2-203ENST00000428017 ATP10AO60312 1499 aa22.96■■□□□ 1.27
VARS2-203ENST00000428017 INO80Q9ULG1 1556 aaPredicted RBP22.96■■□□□ 1.27
VARS2-203ENST00000428017 MAST1Q9Y2H9 1570 aa22.93■■□□□ 1.26
VARS2-203ENST00000428017 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
VARS2-203ENST00000428017 ARID4BQ4LE39 1312 aaPredicted RBP22.93■■□□□ 1.26
VARS2-203ENST00000428017 KIDINS220Q9ULH0 1771 aa22.93■■□□□ 1.26
VARS2-203ENST00000428017 DIP2CQ9Y2E4 1556 aa22.92■■□□□ 1.26
VARS2-203ENST00000428017 CROCC2H7BZ55 1655 aa22.91■■□□□ 1.26
VARS2-203ENST00000428017 ABCA6Q8N139 1617 aa22.9■■□□□ 1.26
VARS2-203ENST00000428017 RRP7BPQ9NSQ0 103 aa22.9■■□□□ 1.26
VARS2-203ENST00000428017 A2MP01023 1474 aa22.88■■□□□ 1.25
VARS2-203ENST00000428017 PTPRKQ15262 1439 aa22.88■■□□□ 1.25
VARS2-203ENST00000428017 KIF15Q9NS87 1388 aa22.88■■□□□ 1.25
VARS2-203ENST00000428017 ROCK1Q13464 1354 aa22.86■■□□□ 1.25
VARS2-203ENST00000428017 DHX29Q7Z478 1369 aaKnown RBP22.86■■□□□ 1.25
VARS2-203ENST00000428017 ADGRL2O95490 1459 aa22.85■■□□□ 1.25
VARS2-203ENST00000428017 PLXNC1O60486 1568 aa22.85■■□□□ 1.25
VARS2-203ENST00000428017 NCOA1Q15788 1441 aa22.85■■□□□ 1.25
VARS2-203ENST00000428017 REREQ9P2R6 1566 aa22.84■■□□□ 1.25
VARS2-203ENST00000428017 ADGBQ8N7X0 1667 aa22.84■■□□□ 1.25
VARS2-203ENST00000428017 DUOX2Q9NRD8 1548 aa22.82■■□□□ 1.24
VARS2-203ENST00000428017 MLECQ14165 292 aa22.8■■□□□ 1.24
VARS2-203ENST00000428017 KIF3BO15066 747 aa22.79■■□□□ 1.24
VARS2-203ENST00000428017 AGLP35573 1532 aa22.78■■□□□ 1.24
VARS2-203ENST00000428017 ERBINQ96RT1 1412 aa22.77■■□□□ 1.24
VARS2-203ENST00000428017 ANKRD50Q9ULJ7 1429 aa22.75■■□□□ 1.23
VARS2-203ENST00000428017 TRIM26Q12899 539 aaPredicted RBP22.75■■□□□ 1.23
VARS2-203ENST00000428017 GGT6Q6P531 493 aa22.74■■□□□ 1.23
VARS2-203ENST00000428017 ESF1Q9H501 851 aaKnown RBP22.73■■□□□ 1.23
VARS2-203ENST00000428017 SIGLEC1Q9BZZ2 1709 aa22.71■■□□□ 1.23
VARS2-203ENST00000428017 HFM1A2PYH4 1435 aa22.7■■□□□ 1.22
VARS2-203ENST00000428017 NAIPQ13075 1403 aa22.69■■□□□ 1.22
VARS2-203ENST00000428017 EIF2AK4Q9P2K8 1649 aaKnown RBP22.68■■□□□ 1.22
VARS2-203ENST00000428017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.67■■□□□ 1.222e-8■■■□□ 15.4
VARS2-203ENST00000428017 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
VARS2-203ENST00000428017 BCORL1Q5H9F3 1711 aa22.65■■□□□ 1.22
VARS2-203ENST00000428017 KANK1Q14678 1352 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms