RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 RIMS1Q86UR5 1692 aaKnown RBP14.45□□□□□ -0.1
LINC00963-204ENST00000427778 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
LINC00963-204ENST00000427778 ARAP3Q8WWN8 1544 aa14.42□□□□□ -0.1
LINC00963-204ENST00000427778 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
LINC00963-204ENST00000427778 LRRIQ1Q96JM4 1722 aa14.4□□□□□ -0.1
LINC00963-204ENST00000427778 CDK13Q14004 1512 aaKnown RBP14.38□□□□□ -0.11
LINC00963-204ENST00000427778 ARID3CA6NKF2 412 aa14.37□□□□□ -0.11
LINC00963-204ENST00000427778 CLIP1P30622 1438 aa14.37□□□□□ -0.11
LINC00963-204ENST00000427778 FRMPD1Q5SYB0 1578 aa14.37□□□□□ -0.11
LINC00963-204ENST00000427778 SPATA31D1Q6ZQQ2 1576 aa14.36□□□□□ -0.11
LINC00963-204ENST00000427778 CASKIN1Q8WXD9 1431 aa14.36□□□□□ -0.11
LINC00963-204ENST00000427778 KCNH8Q96L42 1107 aa14.36□□□□□ -0.11
LINC00963-204ENST00000427778 FYCO1Q9BQS8 1478 aa14.35□□□□□ -0.11
LINC00963-204ENST00000427778 ARHGEF40Q8TER5 1519 aa14.35□□□□□ -0.11
LINC00963-204ENST00000427778 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
LINC00963-204ENST00000427778 CCDC18Q5T9S5 1454 aa14.33□□□□□ -0.12
LINC00963-204ENST00000427778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC00963-204ENST00000427778 PLEKHD1A6NEE1 506 aa14.33□□□□□ -0.12
LINC00963-204ENST00000427778 TTC37Q6PGP7 1564 aa14.33□□□□□ -0.12
LINC00963-204ENST00000427778 NEO1Q92859 1461 aa14.32□□□□□ -0.12
LINC00963-204ENST00000427778 FER1L4A9Z1Z3 1794 aa14.32□□□□□ -0.12
LINC00963-204ENST00000427778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
LINC00963-204ENST00000427778 SOCS7O14512 581 aa14.32□□□□□ -0.12
LINC00963-204ENST00000427778 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
LINC00963-204ENST00000427778 DISP3Q9P2K9 1392 aa14.32□□□□□ -0.12
LINC00963-204ENST00000427778 CFAP74Q9C0B2 1584 aa14.31□□□□□ -0.12
LINC00963-204ENST00000427778 RICTORQ6R327 1708 aa14.3□□□□□ -0.12
LINC00963-204ENST00000427778 ILDR2Q71H61 639 aa14.3□□□□□ -0.12
LINC00963-204ENST00000427778 CEP162Q5TB80 1403 aa14.3□□□□□ -0.12
LINC00963-204ENST00000427778 TROQ12816 1431 aaPredicted RBP14.29□□□□□ -0.12
LINC00963-204ENST00000427778 KIF14Q15058 1648 aa14.29□□□□□ -0.12
LINC00963-204ENST00000427778 MYO5CQ9NQX4 1742 aa14.29□□□□□ -0.12
LINC00963-204ENST00000427778 PREX1Q8TCU6 1659 aa14.28□□□□□ -0.12
LINC00963-204ENST00000427778 CDK11AQ9UQ88 783 aaPredicted RBP14.28□□□□□ -0.12
LINC00963-204ENST00000427778 SIGLEC1Q9BZZ2 1709 aa14.27□□□□□ -0.13
LINC00963-204ENST00000427778 CERKQ8TCT0 537 aa14.26□□□□□ -0.13
LINC00963-204ENST00000427778 FANCAO15360 1455 aa14.25□□□□□ -0.13
LINC00963-204ENST00000427778 PLCH2O75038 1416 aa14.24□□□□□ -0.13
LINC00963-204ENST00000427778 ARID4BQ4LE39 1312 aaPredicted RBP14.23□□□□□ -0.13
LINC00963-204ENST00000427778 HSPA2P54652 639 aa14.23□□□□□ -0.13
LINC00963-204ENST00000427778 APLP2Q06481 763 aa14.23□□□□□ -0.13
LINC00963-204ENST00000427778 ATP1B4Q9UN42 357 aaPredicted RBP14.22□□□□□ -0.13
LINC00963-204ENST00000427778 PREX2Q70Z35 1606 aa14.21□□□□□ -0.13
LINC00963-204ENST00000427778 STRCQ7RTU9 1775 aa14.21□□□□□ -0.13
LINC00963-204ENST00000427778 RAPGEF3O95398 923 aa14.2□□□□□ -0.14
LINC00963-204ENST00000427778 AKNAQ7Z591 1439 aa14.2□□□□□ -0.14
LINC00963-204ENST00000427778 CDC42BPBQ9Y5S2 1711 aa14.2□□□□□ -0.14
LINC00963-204ENST00000427778 ZMYM4Q5VZL5 1548 aa14.2□□□□□ -0.14
LINC00963-204ENST00000427778 CDC42BPAQ5VT25 1732 aa14.18□□□□□ -0.14
LINC00963-204ENST00000427778 ABCB7O75027 752 aa14.18□□□□□ -0.14
LINC00963-204ENST00000427778 DENND4BO75064 1496 aaPredicted RBP14.18□□□□□ -0.14
LINC00963-204ENST00000427778 POGZQ7Z3K3 1410 aa14.17□□□□□ -0.14
LINC00963-204ENST00000427778 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
LINC00963-204ENST00000427778 ZFYVE16Q7Z3T8 1539 aa14.16□□□□□ -0.14
LINC00963-204ENST00000427778 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
LINC00963-204ENST00000427778 ARHGAP5Q13017 1502 aa14.15□□□□□ -0.14
LINC00963-204ENST00000427778 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
LINC00963-204ENST00000427778 VPS8Q8N3P4 1428 aa14.15□□□□□ -0.14
LINC00963-204ENST00000427778 MAGI2Q86UL8 1455 aa14.13□□□□□ -0.15
LINC00963-204ENST00000427778 EFCAB2Q5VUJ9 269 aa14.12□□□□□ -0.15
LINC00963-204ENST00000427778 KDM5CP41229 1560 aa14.12□□□□□ -0.15
LINC00963-204ENST00000427778 TIAM1Q13009 1591 aa14.12□□□□□ -0.15
LINC00963-204ENST00000427778 ABCC1P33527 1531 aa14.11□□□□□ -0.15
LINC00963-204ENST00000427778 MAP3K1Q13233 1512 aa14.11□□□□□ -0.15
LINC00963-204ENST00000427778 SCAPERQ9BY12 1400 aa14.11□□□□□ -0.15
LINC00963-204ENST00000427778 ZNF518AQ6AHZ1 1483 aa14.11□□□□□ -0.15
LINC00963-204ENST00000427778 ITSN2Q9NZM3 1697 aa14.1□□□□□ -0.15
LINC00963-204ENST00000427778 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
LINC00963-204ENST00000427778 MTUS2Q5JR59 1369 aa14.09□□□□□ -0.15
LINC00963-204ENST00000427778 ARHGEF12Q9NZN5 1544 aa14.09□□□□□ -0.15
LINC00963-204ENST00000427778 YEATS2Q9ULM3 1422 aa14.08□□□□□ -0.15
LINC00963-204ENST00000427778 SETD1BQ9UPS6 1966 aaKnown RBP14.08□□□□□ -0.16
LINC00963-204ENST00000427778 SUPT6HQ7KZ85 1726 aaKnown RBP14.07□□□□□ -0.16
LINC00963-204ENST00000427778 SAMD9LQ8IVG5 1584 aa14.07□□□□□ -0.16
LINC00963-204ENST00000427778 IQSEC2Q5JU85 1478 aa14.05□□□□□ -0.16
LINC00963-204ENST00000427778 C3P01024 1663 aa14.04□□□□□ -0.16
LINC00963-204ENST00000427778 CCNB3Q8WWL7 1395 aa14.04□□□□□ -0.16
LINC00963-204ENST00000427778 PLEKHH2Q8IVE3 1493 aa14.04□□□□□ -0.16
LINC00963-204ENST00000427778 MLH3Q9UHC1 1453 aa14.04□□□□□ -0.16
LINC00963-204ENST00000427778 REREQ9P2R6 1566 aa14.04□□□□□ -0.16
LINC00963-204ENST00000427778 UHRF1BP1Q6BDS2 1440 aa14.03□□□□□ -0.16
LINC00963-204ENST00000427778 KIAA1107Q9UPP5 1409 aa14.03□□□□□ -0.16
LINC00963-204ENST00000427778 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
LINC00963-204ENST00000427778 LTBP4Q8N2S1 1624 aa14.03□□□□□ -0.16
LINC00963-204ENST00000427778 SYCP2Q9BX26 1530 aa14.02□□□□□ -0.16
LINC00963-204ENST00000427778 NCOA2Q15596 1464 aa14.02□□□□□ -0.16
LINC00963-204ENST00000427778 MLECQ14165 292 aa14.02□□□□□ -0.17
LINC00963-204ENST00000427778 DIP2CQ9Y2E4 1556 aa14.01□□□□□ -0.17
LINC00963-204ENST00000427778 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
LINC00963-204ENST00000427778 ABCA6Q8N139 1617 aa14.01□□□□□ -0.17
LINC00963-204ENST00000427778 ATP10AO60312 1499 aa14□□□□□ -0.17
LINC00963-204ENST00000427778 C9orf84Q5VXU9 1444 aa14□□□□□ -0.17
LINC00963-204ENST00000427778 TRAPPC8Q9Y2L5 1435 aa14□□□□□ -0.17
LINC00963-204ENST00000427778 SLC4A2P04920 1241 aa14□□□□□ -0.17
LINC00963-204ENST00000427778 PTPRTO14522 1441 aa13.99□□□□□ -0.17
LINC00963-204ENST00000427778 INO80Q9ULG1 1556 aaPredicted RBP13.99□□□□□ -0.17
LINC00963-204ENST00000427778 AFAP1Q8N556 730 aa13.98□□□□□ -0.17
LINC00963-204ENST00000427778 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
LINC00963-204ENST00000427778 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
LINC00963-204ENST00000427778 AGLP35573 1532 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms