RNA–Protein interactions for RNA: ENST00000427538.5

VSIG4-203, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 3

Gene VSIG4, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-203ENST00000427538 HECW1Q76N89 1606 aa13.92□□□□□ -0.18
VSIG4-203ENST00000427538 CASKIN1Q8WXD9 1431 aa13.9□□□□□ -0.18
VSIG4-203ENST00000427538 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
VSIG4-203ENST00000427538 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
VSIG4-203ENST00000427538 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
VSIG4-203ENST00000427538 DIP2BQ9P265 1576 aa13.87□□□□□ -0.19
VSIG4-203ENST00000427538 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
VSIG4-203ENST00000427538 PCF11O94913 1555 aaKnown RBP13.85□□□□□ -0.19
VSIG4-203ENST00000427538 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
VSIG4-203ENST00000427538 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
VSIG4-203ENST00000427538 CD109Q6YHK3 1445 aa13.83□□□□□ -0.2
VSIG4-203ENST00000427538 MTUS2Q5JR59 1369 aa13.82□□□□□ -0.2
VSIG4-203ENST00000427538 GLI2P10070 1586 aa13.81□□□□□ -0.2
VSIG4-203ENST00000427538 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
VSIG4-203ENST00000427538 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
VSIG4-203ENST00000427538 TROQ12816 1431 aaPredicted RBP13.8□□□□□ -0.2
VSIG4-203ENST00000427538 TEX14Q8IWB6 1497 aa13.8□□□□□ -0.2
VSIG4-203ENST00000427538 POTEHQ6S545 545 aa13.78□□□□□ -0.2
VSIG4-203ENST00000427538 TSPOAP1O95153 1857 aa13.76□□□□□ -0.21
VSIG4-203ENST00000427538 KIF14Q15058 1648 aa13.75□□□□□ -0.21
VSIG4-203ENST00000427538 CFAP43Q8NDM7 1665 aa13.73□□□□□ -0.21
VSIG4-203ENST00000427538 MAP3K4Q9Y6R4 1608 aa13.73□□□□□ -0.21
VSIG4-203ENST00000427538 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
VSIG4-203ENST00000427538 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
VSIG4-203ENST00000427538 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
VSIG4-203ENST00000427538 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
VSIG4-203ENST00000427538 MAGI3Q5TCQ9 1506 aa13.73□□□□□ -0.21
VSIG4-203ENST00000427538 ABCA9Q8IUA7 1624 aa13.72□□□□□ -0.21
VSIG4-203ENST00000427538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.71□□□□□ -0.21
VSIG4-203ENST00000427538 PHLDB1Q86UU1 1377 aa13.71□□□□□ -0.22
VSIG4-203ENST00000427538 CCNB3Q8WWL7 1395 aa13.71□□□□□ -0.22
VSIG4-203ENST00000427538 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
VSIG4-203ENST00000427538 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
VSIG4-203ENST00000427538 ZNF777Q9ULD5 760 aaPredicted RBP13.7□□□□□ -0.22
VSIG4-203ENST00000427538 PLCH2O75038 1416 aa13.69□□□□□ -0.22
VSIG4-203ENST00000427538 EHBP1L1Q8N3D4 1523 aa13.69□□□□□ -0.22
VSIG4-203ENST00000427538 KDM6BO15054 1643 aa13.68□□□□□ -0.22
VSIG4-203ENST00000427538 FANCAO15360 1455 aa13.68□□□□□ -0.22
VSIG4-203ENST00000427538 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
VSIG4-203ENST00000427538 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
VSIG4-203ENST00000427538 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
VSIG4-203ENST00000427538 TIAM1Q13009 1591 aa13.67□□□□□ -0.22
VSIG4-203ENST00000427538 ARHGAP5Q13017 1502 aa13.67□□□□□ -0.22
VSIG4-203ENST00000427538 NEO1Q92859 1461 aa13.67□□□□□ -0.22
VSIG4-203ENST00000427538 TTC37Q6PGP7 1564 aa13.66□□□□□ -0.22
VSIG4-203ENST00000427538 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
VSIG4-203ENST00000427538 AKNAQ7Z591 1439 aa13.65□□□□□ -0.22
VSIG4-203ENST00000427538 MAP3K1Q13233 1512 aa13.65□□□□□ -0.22
VSIG4-203ENST00000427538 LRRC9Q6ZRR7 1453 aa13.65□□□□□ -0.22
VSIG4-203ENST00000427538 CFAP74Q9C0B2 1584 aa13.63□□□□□ -0.23
VSIG4-203ENST00000427538 RAPGEF3O95398 923 aa13.63□□□□□ -0.23
VSIG4-203ENST00000427538 PPRC1Q5VV67 1664 aaKnown RBP13.63□□□□□ -0.23
VSIG4-203ENST00000427538 SCAPERQ9BY12 1400 aa13.62□□□□□ -0.23
VSIG4-203ENST00000427538 MYO5CQ9NQX4 1742 aa13.61□□□□□ -0.23
VSIG4-203ENST00000427538 DENND4BO75064 1496 aaPredicted RBP13.61□□□□□ -0.23
VSIG4-203ENST00000427538 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
VSIG4-203ENST00000427538 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
VSIG4-203ENST00000427538 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
VSIG4-203ENST00000427538 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
VSIG4-203ENST00000427538 ARAP3Q8WWN8 1544 aa13.59□□□□□ -0.23
VSIG4-203ENST00000427538 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
VSIG4-203ENST00000427538 PPARGC1BQ86YN6 1023 aaKnown RBP13.59□□□□□ -0.23
VSIG4-203ENST00000427538 COL17A1Q9UMD9 1497 aaPredicted RBP13.58□□□□□ -0.24
VSIG4-203ENST00000427538 SSUH2Q9Y2M2 353 aa13.57□□□□□ -0.24
VSIG4-203ENST00000427538 HNRNPMP52272 730 aaKnown RBP eCLIP13.56□□□□□ -0.24
VSIG4-203ENST00000427538 PREX2Q70Z35 1606 aa13.56□□□□□ -0.24
VSIG4-203ENST00000427538 PLEKHH2Q8IVE3 1493 aa13.55□□□□□ -0.24
VSIG4-203ENST00000427538 AFAP1Q8N556 730 aa13.55□□□□□ -0.24
VSIG4-203ENST00000427538 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
VSIG4-203ENST00000427538 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
VSIG4-203ENST00000427538 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
VSIG4-203ENST00000427538 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
VSIG4-203ENST00000427538 ZNF644Q9H582 1327 aaPredicted RBP13.53□□□□□ -0.24
VSIG4-203ENST00000427538 MYOM3Q5VTT5 1437 aa13.53□□□□□ -0.24
VSIG4-203ENST00000427538 POGZQ7Z3K3 1410 aa13.53□□□□□ -0.24
VSIG4-203ENST00000427538 ZNF518AQ6AHZ1 1483 aa13.53□□□□□ -0.24
VSIG4-203ENST00000427538 TSPY4P0CV99 314 aa13.52□□□□□ -0.25
VSIG4-203ENST00000427538 TSPY10P0CW01 314 aa13.52□□□□□ -0.25
VSIG4-203ENST00000427538 CDC42BPAQ5VT25 1732 aa13.52□□□□□ -0.25
VSIG4-203ENST00000427538 CDC42BPBQ9Y5S2 1711 aa13.51□□□□□ -0.25
VSIG4-203ENST00000427538 SPAG9O60271 1321 aaKnown RBP13.51□□□□□ -0.25
VSIG4-203ENST00000427538 FAM50AQ14320 339 aaKnown RBP13.51□□□□□ -0.25
VSIG4-203ENST00000427538 MIA2Q96PC5 1412 aa13.5□□□□□ -0.25
VSIG4-203ENST00000427538 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
VSIG4-203ENST00000427538 ABCC1P33527 1531 aa13.49□□□□□ -0.25
VSIG4-203ENST00000427538 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
VSIG4-203ENST00000427538 TRAPPC8Q9Y2L5 1435 aa13.48□□□□□ -0.25
VSIG4-203ENST00000427538 SAMD9LQ8IVG5 1584 aa13.48□□□□□ -0.25
VSIG4-203ENST00000427538 CAMSAP2Q08AD1 1489 aa13.48□□□□□ -0.25
VSIG4-203ENST00000427538 MAGI2Q86UL8 1455 aa13.48□□□□□ -0.25
VSIG4-203ENST00000427538 ZFYVE16Q7Z3T8 1539 aa13.46□□□□□ -0.25
VSIG4-203ENST00000427538 ARHGEF12Q9NZN5 1544 aa13.45□□□□□ -0.26
VSIG4-203ENST00000427538 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
VSIG4-203ENST00000427538 CCDC141Q6ZP82 1450 aa13.44□□□□□ -0.26
VSIG4-203ENST00000427538 SPDYE1Q8NFV5 336 aaPredicted RBP13.44□□□□□ -0.26
VSIG4-203ENST00000427538 FRMPD1Q5SYB0 1578 aa13.44□□□□□ -0.26
VSIG4-203ENST00000427538 RICTORQ6R327 1708 aa13.43□□□□□ -0.26
VSIG4-203ENST00000427538 YEATS2Q9ULM3 1422 aa13.43□□□□□ -0.26
VSIG4-203ENST00000427538 ZMYM4Q5VZL5 1548 aa13.43□□□□□ -0.26
VSIG4-203ENST00000427538 MLH3Q9UHC1 1453 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms