RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
SH3D19-204ENST00000427414 CCER1Q8TC90 406 aaPredicted RBP12.62□□□□□ -0.39
SH3D19-204ENST00000427414 ADGRL2O95490 1459 aa12.61□□□□□ -0.39
SH3D19-204ENST00000427414 PLEKHH2Q8IVE3 1493 aa12.61□□□□□ -0.39
SH3D19-204ENST00000427414 RSPH4AQ5TD94 716 aa12.6□□□□□ -0.39
SH3D19-204ENST00000427414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
SH3D19-204ENST00000427414 CENPBP07199 599 aaPredicted RBP12.6□□□□□ -0.39
SH3D19-204ENST00000427414 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
SH3D19-204ENST00000427414 DHX57Q6P158 1386 aaKnown RBP12.59□□□□□ -0.39
SH3D19-204ENST00000427414 DAPK1P53355 1430 aa12.58□□□□□ -0.39
SH3D19-204ENST00000427414 CAMSAP2Q08AD1 1489 aa12.58□□□□□ -0.4
SH3D19-204ENST00000427414 RAB3GAP2Q9H2M9 1393 aa12.58□□□□□ -0.4
SH3D19-204ENST00000427414 FAM50AQ14320 339 aaKnown RBP12.58□□□□□ -0.4
SH3D19-204ENST00000427414 MAST1Q9Y2H9 1570 aa12.57□□□□□ -0.4
SH3D19-204ENST00000427414 NAIPQ13075 1403 aa12.57□□□□□ -0.4
SH3D19-204ENST00000427414 KIAA1107Q9UPP5 1409 aa12.57□□□□□ -0.4
SH3D19-204ENST00000427414 CDC42BPBQ9Y5S2 1711 aa12.57□□□□□ -0.4
SH3D19-204ENST00000427414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.56□□□□□ -0.4
SH3D19-204ENST00000427414 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
SH3D19-204ENST00000427414 ABCC5O15440 1437 aa12.55□□□□□ -0.4
SH3D19-204ENST00000427414 PTPRKQ15262 1439 aa12.55□□□□□ -0.4
SH3D19-204ENST00000427414 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
SH3D19-204ENST00000427414 ABCA9Q8IUA7 1624 aa12.54□□□□□ -0.4
SH3D19-204ENST00000427414 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
SH3D19-204ENST00000427414 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
SH3D19-204ENST00000427414 PLCH2O75038 1416 aa12.52□□□□□ -0.41
SH3D19-204ENST00000427414 TTC37Q6PGP7 1564 aa12.51□□□□□ -0.41
SH3D19-204ENST00000427414 SAMD9LQ8IVG5 1584 aa12.51□□□□□ -0.41
SH3D19-204ENST00000427414 CFAP74Q9C0B2 1584 aa12.5□□□□□ -0.41
SH3D19-204ENST00000427414 MBD5Q9P267 1494 aa12.5□□□□□ -0.41
SH3D19-204ENST00000427414 PLXNC1O60486 1568 aa12.49□□□□□ -0.41
SH3D19-204ENST00000427414 CCDC141Q6ZP82 1450 aa12.49□□□□□ -0.41
SH3D19-204ENST00000427414 MAPKBP1O60336 1514 aa12.48□□□□□ -0.41
SH3D19-204ENST00000427414 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
SH3D19-204ENST00000427414 NCOA1Q15788 1441 aa12.47□□□□□ -0.41
SH3D19-204ENST00000427414 KDM5DQ9BY66 1539 aa12.47□□□□□ -0.41
SH3D19-204ENST00000427414 ARHGAP5Q13017 1502 aa12.46□□□□□ -0.42
SH3D19-204ENST00000427414 ABCC1P33527 1531 aa12.45□□□□□ -0.42
SH3D19-204ENST00000427414 RTEL1-TNFRSF6BF6WH68 1400 aa12.44□□□□□ -0.42
SH3D19-204ENST00000427414 GLI2P10070 1586 aa12.44□□□□□ -0.42
SH3D19-204ENST00000427414 C9orf84Q5VXU9 1444 aa12.44□□□□□ -0.42
SH3D19-204ENST00000427414 ASXL2Q76L83 1435 aa12.43□□□□□ -0.42
SH3D19-204ENST00000427414 ITGAEP38570 1179 aa12.42□□□□□ -0.42
SH3D19-204ENST00000427414 EFCAB2Q5VUJ9 269 aa12.42□□□□□ -0.42
SH3D19-204ENST00000427414 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
SH3D19-204ENST00000427414 RIMBP3CA6NJZ7 1639 aa12.41□□□□□ -0.42
SH3D19-204ENST00000427414 RIMBP3BA6NNM3 1639 aa12.41□□□□□ -0.42
SH3D19-204ENST00000427414 RIMBP3Q9UFD9 1639 aa12.41□□□□□ -0.42
SH3D19-204ENST00000427414 ARID3CA6NKF2 412 aa12.41□□□□□ -0.42
SH3D19-204ENST00000427414 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
SH3D19-204ENST00000427414 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
SH3D19-204ENST00000427414 SYCP2Q9BX26 1530 aa12.39□□□□□ -0.43
SH3D19-204ENST00000427414 DUOX2Q9NRD8 1548 aa12.39□□□□□ -0.43
SH3D19-204ENST00000427414 UNC13BO14795 1591 aa12.39□□□□□ -0.43
SH3D19-204ENST00000427414 ZNF644Q9H582 1327 aaPredicted RBP12.38□□□□□ -0.43
SH3D19-204ENST00000427414 ERBINQ96RT1 1412 aa12.38□□□□□ -0.43
SH3D19-204ENST00000427414 KDM6BO15054 1643 aa12.37□□□□□ -0.43
SH3D19-204ENST00000427414 NEO1Q92859 1461 aa12.37□□□□□ -0.43
SH3D19-204ENST00000427414 ANKRD50Q9ULJ7 1429 aa12.37□□□□□ -0.43
SH3D19-204ENST00000427414 EIF2AK4Q9P2K8 1649 aaKnown RBP12.36□□□□□ -0.43
SH3D19-204ENST00000427414 MAGI2Q86UL8 1455 aa12.36□□□□□ -0.43
SH3D19-204ENST00000427414 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
SH3D19-204ENST00000427414 YTHDC1Q96MU7 727 aaKnown RBP12.35□□□□□ -0.43
SH3D19-204ENST00000427414 MAP3K4Q9Y6R4 1608 aa12.35□□□□□ -0.43
SH3D19-204ENST00000427414 FANCAO15360 1455 aa12.35□□□□□ -0.43
SH3D19-204ENST00000427414 ARHGEF12Q9NZN5 1544 aa12.33□□□□□ -0.44
SH3D19-204ENST00000427414 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
SH3D19-204ENST00000427414 BCORL1Q5H9F3 1711 aa12.33□□□□□ -0.44
SH3D19-204ENST00000427414 DENND4BO75064 1496 aaPredicted RBP12.33□□□□□ -0.44
SH3D19-204ENST00000427414 KIF15Q9NS87 1388 aa12.33□□□□□ -0.44
SH3D19-204ENST00000427414 PZPP20742 1482 aa12.32□□□□□ -0.44
SH3D19-204ENST00000427414 IQGAP3Q86VI3 1631 aa12.32□□□□□ -0.44
SH3D19-204ENST00000427414 RRP7BPQ9NSQ0 103 aa12.32□□□□□ -0.44
SH3D19-204ENST00000427414 KDM5CP41229 1560 aa12.32□□□□□ -0.44
SH3D19-204ENST00000427414 ZFYVE16Q7Z3T8 1539 aa12.32□□□□□ -0.44
SH3D19-204ENST00000427414 DEPDC5O75140 1603 aa12.31□□□□□ -0.44
SH3D19-204ENST00000427414 ZNF777Q9ULD5 760 aaPredicted RBP12.31□□□□□ -0.44
SH3D19-204ENST00000427414 ZNF518AQ6AHZ1 1483 aa12.3□□□□□ -0.44
SH3D19-204ENST00000427414 MPHOSPH9Q99550 1183 aa12.3□□□□□ -0.44
SH3D19-204ENST00000427414 CHIC2Q9UKJ5 165 aa12.3□□□□□ -0.44
SH3D19-204ENST00000427414 CD109Q6YHK3 1445 aa12.29□□□□□ -0.44
SH3D19-204ENST00000427414 ADGRL1O94910 1474 aa12.29□□□□□ -0.44
SH3D19-204ENST00000427414 ATP7AQ04656 1500 aa12.29□□□□□ -0.44
SH3D19-204ENST00000427414 HNRNPMP52272 730 aaKnown RBP eCLIP12.29□□□□□ -0.442e-7■■■□□ 16
SH3D19-204ENST00000427414 ANKRD30BQ9BXX2 1392 aa12.29□□□□□ -0.44
SH3D19-204ENST00000427414 MLH3Q9UHC1 1453 aa12.29□□□□□ -0.44
SH3D19-204ENST00000427414 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
SH3D19-204ENST00000427414 RPRD2Q5VT52 1461 aaKnown RBP12.28□□□□□ -0.44
SH3D19-204ENST00000427414 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
SH3D19-204ENST00000427414 ATP10AO60312 1499 aa12.27□□□□□ -0.44
SH3D19-204ENST00000427414 TRAPPC8Q9Y2L5 1435 aa12.27□□□□□ -0.45
SH3D19-204ENST00000427414 DIP2BQ9P265 1576 aa12.26□□□□□ -0.45
SH3D19-204ENST00000427414 VWDEQ8N2E2 1590 aa12.25□□□□□ -0.45
SH3D19-204ENST00000427414 POGZQ7Z3K3 1410 aa12.25□□□□□ -0.45
SH3D19-204ENST00000427414 NEURL4Q96JN8 1562 aa12.25□□□□□ -0.45
SH3D19-204ENST00000427414 FAM135AQ9P2D6 1515 aa12.25□□□□□ -0.45
SH3D19-204ENST00000427414 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
SH3D19-204ENST00000427414 TEX14Q8IWB6 1497 aa12.24□□□□□ -0.45
SH3D19-204ENST00000427414 RNF17Q9BXT8 1623 aaKnown RBP12.24□□□□□ -0.45
SH3D19-204ENST00000427414 HECW2Q9P2P5 1572 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms